Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt7i05
         (233 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    26   0.053
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   0.65 
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    23   0.65 
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    22   0.86 
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    22   0.86 
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   2.0  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    20   4.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    20   4.6  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          19   6.0  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      19   6.0  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      19   6.0  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    19   8.0  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    19   8.0  

>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 26.2 bits (55), Expect = 0.053
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -3

Query: 129 GQCVLNRNN*TRHIHTVYFSRAQISLSLK 43
           GQC+ +R N   ++H++ F   Q+   LK
Sbjct: 49  GQCISSRRNGRHNVHSLAFGAIQLRQLLK 77



 Score = 22.6 bits (46), Expect = 0.65
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 162 NSSQTHWSDGNGQCVLNR 109
           NS +TH  DG+   V+ R
Sbjct: 540 NSEETHQKDGSSDSVIKR 557


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.6 bits (46), Expect = 0.65
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 162 NSSQTHWSDGNGQCVLNR 109
           NS +TH  DG+   V+ R
Sbjct: 306 NSEETHQKDGSSDSVIKR 323


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 22.6 bits (46), Expect = 0.65
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 162 NSSQTHWSDGNGQCVLNR 109
           NS +TH  DG+   V+ R
Sbjct: 221 NSEETHQKDGSSDSVIKR 238


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.2 bits (45), Expect = 0.86
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 55  TDLCSTKINSVYMSCLIVPI 114
           TD C++K N+   SCL V +
Sbjct: 216 TDYCNSKTNTGEYSCLKVDL 235


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.2 bits (45), Expect = 0.86
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 55  TDLCSTKINSVYMSCLIVPI 114
           TD C++K N+   SCL V +
Sbjct: 216 TDYCNSKTNTGEYSCLKVDL 235


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.0 bits (42), Expect = 2.0
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +1

Query: 151 LGGVTNTEGSNAGGIFVQFNXXCTS 225
           L G+  T+GS+A  I V     C S
Sbjct: 279 LAGIVQTKGSDAELICVTTGTKCVS 303


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 19.8 bits (39), Expect = 4.6
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 171 SVCNSSQTHWSDGNGQCVLNRN 106
           SV  S ++HW+D   +   NR+
Sbjct: 625 SVVPSDESHWNDLAMEFYYNRS 646


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 19.8 bits (39), Expect = 4.6
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 171 SVCNSSQTHWSDGNGQCVLNRN 106
           SV  S ++HW+D   +   NR+
Sbjct: 663 SVVPSDESHWNDLAMEFYYNRS 684


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 19.4 bits (38), Expect = 6.0
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 107 TIKHDIYTLFILVEHKSVFH 48
           T + +IY LF  V+  +V+H
Sbjct: 33  TRQKNIYELFWHVDQPTVYH 52


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 19.4 bits (38), Expect = 6.0
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 107 TIKHDIYTLFILVEHKSVFH 48
           T + +IY LF  V+  +V+H
Sbjct: 33  TRQKNIYELFWHVDQPTVYH 52


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 19.4 bits (38), Expect = 6.0
 Identities = 8/18 (44%), Positives = 12/18 (66%), Gaps = 1/18 (5%)
 Frame = -1

Query: 98  HDIY-TLFILVEHKSVFH 48
           H ++ TL  L  HKS++H
Sbjct: 408 HKVFRTLNSLNNHKSIYH 425


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 19.0 bits (37), Expect = 8.0
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 202 ERIFRLHSIPQ 170
           E+IF  H IPQ
Sbjct: 269 EKIFEPHRIPQ 279


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 19.0 bits (37), Expect = 8.0
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 171 SVCNSSQTHWSDGN 130
           +V N S T+W  GN
Sbjct: 339 NVPNGSVTNWVSGN 352


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,329
Number of Sequences: 438
Number of extensions: 1004
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  3772710
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)