Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt7i04
         (591 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66562-4|CAA91465.1|  258|Caenorhabditis elegans Hypothetical pr...    29   1.9  
Z92796-2|CAB07231.1|  347|Caenorhabditis elegans Hypothetical pr...    27   7.5  

>Z66562-4|CAA91465.1|  258|Caenorhabditis elegans Hypothetical
           protein F42E11.3 protein.
          Length = 258

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 278 KFALFFCRMVVLDTLPLFWAVASRYLNFQI 189
           KF +  C  +V   +PL+W V S +L  QI
Sbjct: 99  KFVISICDRLVTAQMPLYWFVVSAFLIIQI 128


>Z92796-2|CAB07231.1|  347|Caenorhabditis elegans Hypothetical
           protein H25K10.3 protein.
          Length = 347

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 157 GLTTIVVECRVIWKFKYLLATAQKSGNVSKTTILQKNKANL 279
           G    VV   +I  + YLLA  +K+ N  K + +QK+K  +
Sbjct: 201 GAILTVVCVYLIIAYSYLLAVLRKNSNAIKDSNMQKSKTQI 241


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,072,496
Number of Sequences: 27780
Number of extensions: 233375
Number of successful extensions: 537
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 537
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)