Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt7h15
(294 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-2|CAB04970.1| 263|Caenorhabditis elegans Hypothetical pr... 27 1.8
Z81593-12|CAB04744.1| 1274|Caenorhabditis elegans Hypothetical p... 27 2.3
AL023822-2|CAA19440.1| 1274|Caenorhabditis elegans Hypothetical ... 27 2.3
Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical p... 25 7.1
Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical pr... 25 7.1
Z77666-8|CAJ43910.1| 493|Caenorhabditis elegans Hypothetical pr... 25 7.1
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr... 25 7.1
Z70271-5|CAA94233.2| 443|Caenorhabditis elegans Hypothetical pr... 25 7.1
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 25 7.1
Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z80214-1|CAB02262.1| 500|Caenorhabditis elegans Hypothetical pr... 25 9.4
AF031477-1|AAC15586.1| 443|Caenorhabditis elegans delta6-fatty-... 25 9.4
>Z82083-2|CAB04970.1| 263|Caenorhabditis elegans Hypothetical
protein ZK1010.4 protein.
Length = 263
Score = 27.5 bits (58), Expect = 1.8
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +2
Query: 23 IQRACLDPTLPYCNLGECSATPAEGCEPASGASVAPTA*YSILKH-TRKYITDTKKKIFL 199
+ ACL + C C+A PA C P+S Y ++ R +T + IF+
Sbjct: 17 VTEACLSSGV--CGSSYCAAPPAVSCSPSSCQPGYSCGQYGCARNRARSAVTQKVEGIFI 74
Query: 200 EKT-NKKCNQK 229
+ + N K N +
Sbjct: 75 DDSGNSKENSR 85
>Z81593-12|CAB04744.1| 1274|Caenorhabditis elegans Hypothetical
protein Y102A5A.1 protein.
Length = 1274
Score = 27.1 bits (57), Expect = 2.3
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +2
Query: 212 KKCNQKCFFTIM*SCLINMNISKF 283
+KC +C FT++ SC+ ++I++F
Sbjct: 1122 RKCAFECMFTLLESCVDKIDITQF 1145
>AL023822-2|CAA19440.1| 1274|Caenorhabditis elegans Hypothetical
protein Y102A5A.1 protein.
Length = 1274
Score = 27.1 bits (57), Expect = 2.3
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +2
Query: 212 KKCNQKCFFTIM*SCLINMNISKF 283
+KC +C FT++ SC+ ++I++F
Sbjct: 1122 RKCAFECMFTLLESCVDKIDITQF 1145
>Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical
protein K08E7.5c protein.
Length = 896
Score = 25.4 bits (53), Expect = 7.1
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +2
Query: 35 CLDPTLPYCNLGECSATPAEGCEPASGASVAPT 133
C PT+P C C P C+PA PT
Sbjct: 652 CCLPTIPCCPPIPCCPQPKICCQPAPVCLPPPT 684
>Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical
protein K08E7.5d protein.
Length = 541
Score = 25.4 bits (53), Expect = 7.1
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +2
Query: 35 CLDPTLPYCNLGECSATPAEGCEPASGASVAPT 133
C PT+P C C P C+PA PT
Sbjct: 297 CCLPTIPCCPPIPCCPQPKICCQPAPVCLPPPT 329
>Z77666-8|CAJ43910.1| 493|Caenorhabditis elegans Hypothetical
protein K08E7.5b protein.
Length = 493
Score = 25.4 bits (53), Expect = 7.1
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +2
Query: 35 CLDPTLPYCNLGECSATPAEGCEPASGASVAPT 133
C PT+P C C P C+PA PT
Sbjct: 249 CCLPTIPCCPPIPCCPQPKICCQPAPVCLPPPT 281
>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical protein
K08E7.5a protein.
Length = 1221
Score = 25.4 bits (53), Expect = 7.1
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +2
Query: 35 CLDPTLPYCNLGECSATPAEGCEPASGASVAPT 133
C PT+P C C P C+PA PT
Sbjct: 977 CCLPTIPCCPPIPCCPQPKICCQPAPVCLPPPT 1009
>Z70271-5|CAA94233.2| 443|Caenorhabditis elegans Hypothetical
protein W08D2.4 protein.
Length = 443
Score = 25.4 bits (53), Expect = 7.1
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +2
Query: 38 LDPTLPYCNLGECSATPAEGCE 103
L PT+P CNL C E C+
Sbjct: 388 LFPTMPRCNLNACMKYVKEWCK 409
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 25.4 bits (53), Expect = 7.1
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 118 ICSTDRLIFDTQTYSKIYNRYEKKNFF 198
+C R++ T +SK+Y R KKNF+
Sbjct: 243 LCHKGRMLAQTD-HSKVYYRKFKKNFY 268
>Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical
protein T01D3.3b protein.
Length = 1011
Score = 25.0 bits (52), Expect = 9.4
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = +2
Query: 32 ACLDPTLPYCNLGECSATPAEGCEP 106
AC P C A PA GC+P
Sbjct: 299 ACFSSCQPSCQDPSTPACPAPGCQP 323
>Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical
protein T01D3.3a protein.
Length = 802
Score = 25.0 bits (52), Expect = 9.4
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = +2
Query: 32 ACLDPTLPYCNLGECSATPAEGCEP 106
AC P C A PA GC+P
Sbjct: 90 ACFSSCQPSCQDPSTPACPAPGCQP 114
>Z80214-1|CAB02262.1| 500|Caenorhabditis elegans Hypothetical
protein C27D8.2 protein.
Length = 500
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 26 QRACLDPTLPYCNLGECSA 82
QR CLDP NLG C A
Sbjct: 274 QRVCLDPGHIKKNLGRCGA 292
>AF031477-1|AAC15586.1| 443|Caenorhabditis elegans
delta6-fatty-acid-desaturase protein.
Length = 443
Score = 25.0 bits (52), Expect = 9.4
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +2
Query: 38 LDPTLPYCNLGECSATPAEGCE 103
L PT+P CNL C E C+
Sbjct: 388 LFPTMPRCNLNACVKYVKEWCK 409
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,044,032
Number of Sequences: 27780
Number of extensions: 102697
Number of successful extensions: 288
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 288
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 291481146
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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