Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt7g23
         (260 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK023791-1|BAB14681.1|  348|Homo sapiens protein ( Homo sapiens ...    31   0.50 
AB023136-1|BAA76763.1|  710|Homo sapiens KIAA0919 protein protein.     31   0.50 
AB065774-1|BAC05994.1|  310|Homo sapiens seven transmembrane hel...    27   8.2  

>AK023791-1|BAB14681.1|  348|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13729 fis, clone PLACE3000121, weakly similar to
           VESICULAR TRAFFIC CONTROL PROTEIN SEC15. ).
          Length = 348

 Score = 31.5 bits (68), Expect = 0.50
 Identities = 16/42 (38%), Positives = 26/42 (61%)
 Frame = -3

Query: 198 AVIKNRQDIKISECIIALFELKQNNLNITKLLSSNLQNVIKQ 73
           A +K  +D+ +S   +     K  NL +T+ LS++LQNVIK+
Sbjct: 44  ACLKFSEDLHLSSTEVDDMIRKSTNLLLTRTLSNSLQNVIKR 85


>AB023136-1|BAA76763.1|  710|Homo sapiens KIAA0919 protein protein.
          Length = 710

 Score = 31.5 bits (68), Expect = 0.50
 Identities = 16/42 (38%), Positives = 26/42 (61%)
 Frame = -3

Query: 198 AVIKNRQDIKISECIIALFELKQNNLNITKLLSSNLQNVIKQ 73
           A +K  +D+ +S   +     K  NL +T+ LS++LQNVIK+
Sbjct: 545 ACLKFSEDLHLSSTEVDDMIRKSTNLLLTRTLSNSLQNVIKR 586


>AB065774-1|BAC05994.1|  310|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 310

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 22/67 (32%), Positives = 28/67 (41%)
 Frame = +2

Query: 59  DRYECCLITFCKLLDSSFVMLRLFCFNSNNAIIHSDIFIS*RFLITAAHSIVILHVQLNN 238
           D Y C L    KL      M+ L   +++ AI  S       F+I     IVILH   N+
Sbjct: 173 DHYCCDLQPLLKLACMDTYMINLLLVSNSGAICSSS------FMILIISYIVILHSLRNH 226

Query: 239 GICNKKK 259
               KKK
Sbjct: 227 SAKGKKK 233


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,293,329
Number of Sequences: 237096
Number of extensions: 298413
Number of successful extensions: 320
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 320
length of database: 76,859,062
effective HSP length: 64
effective length of database: 61,684,918
effective search space used: 1357068196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)