Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt7g21
(607 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80838-2|AAL02517.1| 297|Caenorhabditis elegans Abnormal cell l... 30 1.1
U80838-1|AAU05570.1| 597|Caenorhabditis elegans Abnormal cell l... 30 1.1
U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical p... 30 1.5
U28971-2|AAA68377.1| 180|Caenorhabditis elegans Hypothetical pr... 30 1.5
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 29 1.9
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 29 1.9
AC006708-18|AAF60424.2| 450|Caenorhabditis elegans Hypothetical... 29 2.6
AC006708-17|AAK68884.2| 435|Caenorhabditis elegans Hypothetical... 29 2.6
U40954-8|AAM69083.2| 471|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z99286-2|CAH60793.1| 310|Caenorhabditis elegans Hypothetical pr... 28 4.5
AL132846-3|CAB60346.2| 1648|Caenorhabditis elegans Hypothetical ... 27 7.9
>U80838-2|AAL02517.1| 297|Caenorhabditis elegans Abnormal cell
lineage protein 42,isoform a protein.
Length = 297
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +3
Query: 138 TLPVWMKTKPTKEFEPFAGSPPPPEDSFFYIRY-PKSDILFGKPTNSQDALVN 293
T P+ + + A +PPPP + I Y P D+ K TN++ + N
Sbjct: 184 TTPIHWTSSSQNHYRTMAPAPPPPPGKNYQITYTPLDDLTDQKSTNTKSDVEN 236
>U80838-1|AAU05570.1| 597|Caenorhabditis elegans Abnormal cell
lineage protein 42,isoform b protein.
Length = 597
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +3
Query: 138 TLPVWMKTKPTKEFEPFAGSPPPPEDSFFYIRY-PKSDILFGKPTNSQDALVN 293
T P+ + + A +PPPP + I Y P D+ K TN++ + N
Sbjct: 484 TTPIHWTSSSQNHYRTMAPAPPPPPGKNYQITYTPLDDLTDQKSTNTKSDVEN 536
>U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical
protein C34D4.14 protein.
Length = 2761
Score = 29.9 bits (64), Expect = 1.5
Identities = 26/89 (29%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Frame = +3
Query: 354 KHTKPCQDVLHGIAPINTAVNSVTKPKPAGTDDGFKGEGAACGTSVVKVAHQMISSRSPR 533
+H KP L A SV PAGT G A G + + + +
Sbjct: 1672 QHNKPAASALSRFA-------SVKNTTPAGTPSSGGSSGGAIGKKSMSTTNLVDERQKTS 1724
Query: 534 GFTVASPSEDATAPDPQHY-----NLMAR 605
G +VAS + A+A QH NL+AR
Sbjct: 1725 GPSVASTGQAASAESLQHQTPSLENLLAR 1753
>U28971-2|AAA68377.1| 180|Caenorhabditis elegans Hypothetical
protein B0244.9 protein.
Length = 180
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Frame = -1
Query: 505 CATFTTEVPHAA---PSPLKPSSVPAGFGFVTEFTAVLIGAMPWSTSWHGLVCF 353
CA+ E H P+ +P+ + AGF + E +LI +P GL CF
Sbjct: 6 CASVDLEYVHVEDENPNENEPARLRAGFEWAAEPDEILIAGVPTKFIMFGLSCF 59
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/79 (24%), Positives = 35/79 (44%)
Frame = +3
Query: 189 AGSPPPPEDSFFYIRYPKSDILFGKPTNSQDALVNETKEVTAASAFNVVKEKDWSKHTKP 368
+GSP P E+ ++ +S P S+D++ + ++ T + E + S P
Sbjct: 5532 SGSPLPREEDDSHVI--ESHEYTSSPVPSEDSVKHVIEKTTTTTVTEERYEPEDSHSPVP 5589
Query: 369 CQDVLHGIAPINTAVNSVT 425
+D +HG T +VT
Sbjct: 5590 SEDDVHGFVKTTTTTTTVT 5608
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/79 (24%), Positives = 35/79 (44%)
Frame = +3
Query: 189 AGSPPPPEDSFFYIRYPKSDILFGKPTNSQDALVNETKEVTAASAFNVVKEKDWSKHTKP 368
+GSP P E+ ++ +S P S+D++ + ++ T + E + S P
Sbjct: 5532 SGSPLPREEDDSHVI--ESHEYTSSPVPSEDSVKHVIEKTTTTTVTEERYEPEDSHSPVP 5589
Query: 369 CQDVLHGIAPINTAVNSVT 425
+D +HG T +VT
Sbjct: 5590 SEDDVHGFVKTTTTTTTVT 5608
>AC006708-18|AAF60424.2| 450|Caenorhabditis elegans Hypothetical
protein Y110A7A.6a protein.
Length = 450
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 332 RQGERLVETHQAVPRCAPRHRANQHRSELCY 424
RQ LV +HQAV RC + N++R +L Y
Sbjct: 382 RQSNVLVISHQAVLRCILAYFTNKNRDDLPY 412
>AC006708-17|AAK68884.2| 435|Caenorhabditis elegans Hypothetical
protein Y110A7A.6b protein.
Length = 435
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 332 RQGERLVETHQAVPRCAPRHRANQHRSELCY 424
RQ LV +HQAV RC + N++R +L Y
Sbjct: 388 RQSNVLVISHQAVLRCILAYFTNKNRDDLPY 418
>U40954-8|AAM69083.2| 471|Caenorhabditis elegans Hypothetical
protein ZK813.5 protein.
Length = 471
Score = 28.7 bits (61), Expect = 3.4
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -3
Query: 428 FRNRVHCGVDWRDAVEHILARLGVF 354
FRNR CG+D + +++ARL V+
Sbjct: 177 FRNRYVCGIDGGGPIGYVIARLVVY 201
>Z99286-2|CAH60793.1| 310|Caenorhabditis elegans Hypothetical
protein Y7A9C.8 protein.
Length = 310
Score = 28.3 bits (60), Expect = 4.5
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = -1
Query: 523 REDII*CATFTTEVPHAAPSPLKPSSVPAGFGFVTEFTAVLIGAMPW 383
+E II C F++ V + P KP P +GF+ F A+L +MP+
Sbjct: 159 KEFIILCV-FSSRVKYERVDPYKP---PCYYGFILFFHALLFFSMPF 201
>AL132846-3|CAB60346.2| 1648|Caenorhabditis elegans Hypothetical
protein Y43D4A.5 protein.
Length = 1648
Score = 27.5 bits (58), Expect = 7.9
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = +3
Query: 387 GIAPINTAVNSVTKPKPAGTDDGFKGEGAACGTSVVKVAH---QMISSRSPRGFTVASPS 557
G P N +S+ P G++DG G+ G S +AH Q+ S SP G + +
Sbjct: 820 GSVPSNIPDSSLASPP--GSNDGSASFGSGRGPSDFGLAHALPQVPSIGSPPGSASSMVA 877
Query: 558 EDATAPDPQHYNL 596
A P H N+
Sbjct: 878 HTAPGPLKSHRNV 890
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,165,992
Number of Sequences: 27780
Number of extensions: 288964
Number of successful extensions: 1071
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1066
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -