Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt7g19
(695 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_1062 + 8381281-8381490,8382353-8382449,8382546-8382637,838... 109 3e-24
05_01_0405 - 3191639-3192059,3192107-3192234,3192312-3192440,319... 103 1e-22
01_03_0183 + 13543833-13544051,13544161-13544257,13545616-135457... 103 1e-22
01_01_0402 + 3046504-3046582,3047265-3047487,3047954-3048107,304... 64 1e-10
07_03_1748 - 29195037-29195427,29195552-29195679,29195810-291959... 62 5e-10
01_01_0334 - 2698347-2699020,2699321-2699477,2699576-2699647,269... 35 0.054
01_06_0893 - 32766994-32768841,32769596-32769782,32769860-327699... 32 0.38
06_03_1344 - 29472139-29473292,29474478-29475386,29475504-294756... 31 0.66
01_01_1084 - 8521796-8522389,8522503-8522983,8523084-8523190 31 0.66
07_03_0424 - 18060133-18061581 31 0.87
01_06_0496 - 29795490-29796638,29796811-29796870,29798168-297983... 31 0.87
07_01_0010 + 72162-74303,74470-74545,75971-76043,76496-76540,779... 30 1.5
03_04_0180 + 18173005-18173976,18174066-18174170 30 2.0
03_02_0218 - 6522330-6522458,6523257-6523328,6523555-6523707,652... 30 2.0
10_08_0850 + 21050164-21050189,21050874-21050979,21051186-210512... 29 3.5
07_03_0429 + 18103724-18105196 29 3.5
07_03_0425 - 18070607-18070712,18071771-18072744 29 3.5
05_06_0212 + 26410330-26410419,26410562-26410846,26411005-264112... 29 3.5
02_01_0520 + 3761051-3761107,3761420-3761822,3761960-3762129 29 3.5
06_01_0273 + 2022479-2022592,2022830-2022973,2023524-2023601,202... 29 4.7
03_05_0211 - 22020515-22020687,22020801-22020831,22022060-220221... 29 4.7
01_03_0071 + 12203227-12203368,12203551-12203703,12204622-122046... 29 4.7
01_02_0128 + 11407888-11408241 29 4.7
08_02_0259 - 14974526-14974572,14974670-14974742,14974829-149748... 28 6.2
12_02_1280 - 27517683-27517871,27517955-27518029,27518155-275183... 28 8.1
09_06_0001 + 20114108-20115686,20115813-20115928,20116416-201173... 28 8.1
07_01_0180 + 1266975-1267550 28 8.1
02_03_0380 + 18335903-18337837 28 8.1
>01_01_1062 +
8381281-8381490,8382353-8382449,8382546-8382637,
8382729-8382860,8382975-8383160,8383244-8383407,
8383514-8383592,8384484-8384612,8385102-8385229,
8385348-8385711
Length = 526
Score = 109 bits (261), Expect = 3e-24
Identities = 69/151 (45%), Positives = 94/151 (62%), Gaps = 11/151 (7%)
Frame = +1
Query: 226 RMHVFKNAGK---DVDEMRRRRNEVTVELRKNKREETLQKRRN--------VPISYSTDE 372
R+ V +N K D +E RRRR + VE+RK++REE+L K+R VP S +T
Sbjct: 8 RVEVRRNRYKVAVDAEEGRRRREDNMVEIRKSRREESLLKKRREGLQAQAPVPASAATG- 66
Query: 373 EEIDKNLATTDLDELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILV 552
+DK L + L ++ + +N QL A Q RKLLS +++PPI+E+I +G++P V
Sbjct: 67 --VDKKLES--LPAMIGGVYSDDN-NLQLEATTQFRKLLSIERSPPIEEVIQSGVVPRFV 121
Query: 553 QCLSRADNPALQFETAWALTNIASGTSAQTK 645
Q L+R D P LQFE AWALTNIASGTS TK
Sbjct: 122 QFLTREDFPQLQFEAAWALTNIASGTSENTK 152
>05_01_0405 -
3191639-3192059,3192107-3192234,3192312-3192440,
3193538-3193616,3193716-3193879,3193968-3194153,
3194258-3194389,3194484-3194575,3195054-3195150,
3195258-3195485
Length = 551
Score = 103 bits (247), Expect = 1e-22
Identities = 62/154 (40%), Positives = 92/154 (59%), Gaps = 8/154 (5%)
Frame = +1
Query: 208 TDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRN--VPISYSTDEEEI 381
+++A+ R +K A D DE RRRR + VE+RK++REE+L K+R +P + +
Sbjct: 6 SERAEVRRSRYKVA-VDADEGRRRREDNMVEIRKSRREESLLKKRRDGLPAAAAAAAAAS 64
Query: 382 DKNLATTDLDE------LVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILP 543
++ L + ++ A +++ QL A Q RKLLS +++PPI+E+I G++P
Sbjct: 65 PLLAHSSALQQKLEGLPAMVQAVQSDDSAVQLEATTQFRKLLSIERSPPIEEVINTGVVP 124
Query: 544 ILVQCLSRADNPALQFETAWALTNIASGTSAQTK 645
+ L R D P LQFE AWALTNIASGTS TK
Sbjct: 125 RFIAFLQREDYPQLQFEAAWALTNIASGTSDNTK 158
>01_03_0183 +
13543833-13544051,13544161-13544257,13545616-13545707,
13545928-13546047,13546170-13546355,13546439-13546602,
13546691-13546769,13548256-13548387,13548560-13548687,
13548785-13549140,13549211-13549221,13549312-13549431,
13549510-13549637,13552210-13552260,13553105-13553189,
13553856-13553954,13555260-13555535
Length = 780
Score = 103 bits (247), Expect = 1e-22
Identities = 59/137 (43%), Positives = 81/137 (59%), Gaps = 5/137 (3%)
Frame = +1
Query: 247 AGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDE---EEIDKNLATTDLDEL 417
A D E RRRR ++TV LRK R+ L+++R P + + E + + L+ L
Sbjct: 18 ASMDAAEGRRRREDITVILRKADRDRALKEKRRRPTATAAAEGLPQAAHSSAIEKKLESL 77
Query: 418 VMNAAN--AENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQCLSRADNPALQF 591
M +++ QL + Q RKLLS D PPIDE+I +G+LP V+ L+R + P LQF
Sbjct: 78 PMMVQGLYSDDSSMQLESTTQFRKLLSVDHCPPIDEVIRSGVLPRFVEFLTREEYPQLQF 137
Query: 592 ETAWALTNIASGTSAQT 642
E AWALTNIASGT+A T
Sbjct: 138 EAAWALTNIASGTAANT 154
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 538 LPILVQCLSRADNPALQFETAWALTNIASGTSAQ 639
LP L L+ +++ E W ++NI +GT Q
Sbjct: 328 LPCLFNLLTTTQKKSVKREACWTISNITAGTKEQ 361
>01_01_0402 +
3046504-3046582,3047265-3047487,3047954-3048107,
3048253-3048355,3048554-3048738,3048972-3049051,
3049433-3049511,3050015-3050096,3050221-3050279,
3050379-3050684,3050825-3050989
Length = 504
Score = 63.7 bits (148), Expect = 1e-10
Identities = 50/176 (28%), Positives = 83/176 (47%), Gaps = 17/176 (9%)
Frame = +1
Query: 181 ETASTDKMATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRR--NVPI 354
++AS + ++ K++ ++ RRR E + + K +RE ++ +R PI
Sbjct: 4 DSASPSPSSASPLQHHREALKSSVRNTAASRRR--EQAIAIGKERREALIRAKRVCRAPI 61
Query: 355 SYSTDEEEIDKNLATTDLDELVMNAANAENPEA---------------QLAAVQQCRKLL 489
S S DE E+++ D ++ + A A E ++ A++ R+LL
Sbjct: 62 SGS-DEAEMEEGDMVVDEEKACLEAKTAHAVEELKSALSIQGKGVQKKKIEALRDLRRLL 120
Query: 490 SCDKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTKQSSP 657
S + P +D I AG +P+LVQ LS + E AW LTNIA+G +TK P
Sbjct: 121 SQPEVPLVDTAIKAGAVPLLVQYLSFGSSDEQLLEAAWCLTNIAAGEPEETKSLLP 176
Score = 34.3 bits (75), Expect = 0.094
Identities = 15/33 (45%), Positives = 25/33 (75%)
Frame = +1
Query: 547 LVQCLSRADNPALQFETAWALTNIASGTSAQTK 645
L++CL ++DN L+ E++WAL+NIA+G+ K
Sbjct: 335 LIKCL-KSDNRVLRKESSWALSNIAAGSFEHKK 366
>07_03_1748 -
29195037-29195427,29195552-29195679,29195810-29195938,
29196334-29196412,29196508-29196671,29196754-29196936,
29197021-29197146,29197237-29197328,29197412-29197508,
29198013-29198339
Length = 571
Score = 61.7 bits (143), Expect = 5e-10
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Frame = +1
Query: 361 STDEEEIDKNLATTDLDEL--VMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAG 534
S E + A ++L+ L ++ +++ +QL A Q R+LLS +KNP + ++I A
Sbjct: 95 SPPAESVPPTAADSELEGLSEMVEKVWSDDTTSQLEATIQFRRLLSDEKNPTVIKIIRAD 154
Query: 535 ILPILVQCLSRADNPALQFETAWALTNIAS 624
+LP LSR ++P LQ E AW LTNIA+
Sbjct: 155 VLPRFSDFLSRHEHPQLQMEAAWVLTNIAA 184
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 226 RMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRR 342
R+ +K G DV RRRR + + +R++ R+ L KRR
Sbjct: 14 RLAAYK-PGVDVARSRRRREDRLLAVRRSNRDAGLFKRR 51
>01_01_0334 -
2698347-2699020,2699321-2699477,2699576-2699647,
2699697-2700641,2701183-2701259,2701908-2702064
Length = 693
Score = 35.1 bits (77), Expect = 0.054
Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Frame = +1
Query: 247 AGKDVDEMRRRRNEVTVELRKNKRE----ETLQKRRNVPISYSTDEEEIDKNLATTDLDE 414
A + V++ RR +T L K + Q +R + S ST + +D T L
Sbjct: 240 AKRPVNQGFRRSRSLTESLEKYSHLLDSISSNQSKRTLTSSKSTRDHSLDAPAVMTGLQS 299
Query: 415 LVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDEL 522
LVM A N PE LA R ++ D + +DE+
Sbjct: 300 LVMTAENLVIPEHALAPYVPERIIVDGDVDAAMDEI 335
>01_06_0893 -
32766994-32768841,32769596-32769782,32769860-32769987,
32770080-32770283,32770373-32770523,32771424-32771533,
32772534-32772903,32773031-32773189,32773719-32773848,
32773921-32773989,32774066-32774154,32774319-32774439,
32775878-32776148
Length = 1278
Score = 32.3 bits (70), Expect = 0.38
Identities = 18/79 (22%), Positives = 37/79 (46%)
Frame = +1
Query: 178 VETASTDKMATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPIS 357
+E A + +A + + + + A +EM+ +R T + ++ K+++ QK+ N +
Sbjct: 442 IEVAYQEAVALKRQEELIREEEEAWLLENEMKGKRGSTTEKDKRAKKKQAKQKKNNRKVK 501
Query: 358 YSTDEEEIDKNLATTDLDE 414
EE+ D N DE
Sbjct: 502 DKDREEKCDSNFPERSQDE 520
>06_03_1344 -
29472139-29473292,29474478-29475386,29475504-29475618,
29476017-29476218,29477177-29477296,29477431-29477582,
29478177-29478461
Length = 978
Score = 31.5 bits (68), Expect = 0.66
Identities = 12/34 (35%), Positives = 24/34 (70%)
Frame = +1
Query: 283 NEVTVELRKNKREETLQKRRNVPISYSTDEEEID 384
+EV ++ RK+ + E +K+R+V SYS+ + E++
Sbjct: 418 SEVDIDTRKHPKREHRKKKRDVTESYSSSDSEVE 451
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/72 (25%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +1
Query: 172 YCVETASTDKMATDQAKNRMHVFKNAGKDVDE-MRRRRNEVTVELRKNKREETLQKRRNV 348
YC +++ + A +A+ K+ K + E + + EV + R++++ E +K+RN+
Sbjct: 352 YCSDSSFSG--AEVEARKSKQKSKHKKKHLPESLSDSKVEVGRDTRRHQKREHRKKKRNI 409
Query: 349 PISYSTDEEEID 384
S S+ + E+D
Sbjct: 410 TESESSSDSEVD 421
>01_01_1084 - 8521796-8522389,8522503-8522983,8523084-8523190
Length = 393
Score = 31.5 bits (68), Expect = 0.66
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = +1
Query: 493 CDKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTKQSSPCRCST 672
C +D L + + C + AD+ A W L+ + G SAQ +Q C+T
Sbjct: 222 CSDIASLDGLYSRLATLCTISCWAHADHAAAAAAHPWVLSLLEVGCSAQPEQLLDLFCTT 281
Query: 673 C 675
C
Sbjct: 282 C 282
>07_03_0424 - 18060133-18061581
Length = 482
Score = 31.1 bits (67), Expect = 0.87
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 505 PPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIA 621
PP+ ++A G+LP V PAL F TA A + +A
Sbjct: 113 PPVTCVVADGLLPFAVDVAEELGVPALSFRTASACSFLA 151
>01_06_0496 -
29795490-29796638,29796811-29796870,29798168-29798371,
29798739-29798984,29799375-29799464
Length = 582
Score = 31.1 bits (67), Expect = 0.87
Identities = 16/64 (25%), Positives = 34/64 (53%)
Frame = +1
Query: 202 MATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEI 381
M T+ AK + +V K++ VD + ++++N R+ + +VP S ++ E++
Sbjct: 259 METESAKLKRNVRKSSAVTVDSFQTNMTVEPEKIKRNSRKFSSSAADSVPDSQLSELEKV 318
Query: 382 DKNL 393
+NL
Sbjct: 319 KRNL 322
>07_01_0010 +
72162-74303,74470-74545,75971-76043,76496-76540,
77916-78116,78463-78541,78637-78678,78788-78847,
79087-80484,80777-80902,81037-81300
Length = 1501
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/64 (26%), Positives = 30/64 (46%)
Frame = -3
Query: 561 KALN*DGEYSSSYELINRRVFITREQFSALLHSSQLCFRVFCVGSVHHQLIKVGGSEVLV 382
K N D Y E+I + + F +++S + RVF + H ++K+G +V
Sbjct: 617 KTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV 676
Query: 381 DLLL 370
D +L
Sbjct: 677 DTIL 680
>03_04_0180 + 18173005-18173976,18174066-18174170
Length = 358
Score = 29.9 bits (64), Expect = 2.0
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = +1
Query: 439 ENPEAQLAAVQQCR-KLLSCDKNPPIDEL--IAAGILPILVQCLSRADNPALQFETAWAL 609
E+P + L +++ +L K+ P + L +AAG LP LV LSR D P LQ AL
Sbjct: 59 ESPASSLDDLRRAAMELRLLAKHSPDNRLRIVAAGALPPLVALLSRPD-PLLQEHGVTAL 117
Query: 610 TNIA 621
N++
Sbjct: 118 LNLS 121
>03_02_0218 -
6522330-6522458,6523257-6523328,6523555-6523707,
6524370-6524543,6525655-6525835,6525923-6525990
Length = 258
Score = 29.9 bits (64), Expect = 2.0
Identities = 23/84 (27%), Positives = 34/84 (40%)
Frame = +1
Query: 421 MNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQCLSRADNPALQFETA 600
+ AANA++ LA LL +AA ++ + + + L E A
Sbjct: 26 LKAANADDRVEDLAKYLALLSLLDHKHLSFWPSTVAAAVVALACLATNNESSCHLVMEDA 85
Query: 601 WALTNIASGTSAQTKQSSPCRCST 672
I G TK+SS CRCS+
Sbjct: 86 TGRVCIQVGYLKWTKRSSSCRCSS 109
>10_08_0850 + 21050164-21050189,21050874-21050979,21051186-21051257,
21051775-21051828,21052077-21052184,21052653-21052802,
21052914-21053258,21053361-21054801,21054844-21055675,
21057060-21057325,21057530-21059603,21060172-21060442,
21060556-21060990
Length = 2059
Score = 29.1 bits (62), Expect = 3.5
Identities = 26/99 (26%), Positives = 41/99 (41%)
Frame = +1
Query: 361 STDEEEIDKNLATTDLDELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGIL 540
S ++E+ K+L LD + + A + + + R L S PP+ L +A +
Sbjct: 1904 SAIDKEVTKSLQCA-LDRMELPATIRRRIQVAMPILPTSR-LSSITCGPPL--LSSAALS 1959
Query: 541 PILVQCLSRADNPALQFETAWALTNIASGTSAQTKQSSP 657
P QC + A P QF W TN++ A P
Sbjct: 1960 PF--QCSTSAAGPHQQFPLNWIPTNLSRRCKAALPSQDP 1996
>07_03_0429 + 18103724-18105196
Length = 490
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 505 PPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIA 621
PP+ ++A +LP + PAL F TA A + +A
Sbjct: 120 PPVTTVVADALLPFAIDVAEELGVPALAFRTASACSFLA 158
>07_03_0425 - 18070607-18070712,18071771-18072744
Length = 359
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 505 PPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIA 621
PP+ ++A GI+P+ + PAL F T A + +A
Sbjct: 121 PPVTCVVADGIMPLAIDIAEEIGVPALGFRTVSACSFLA 159
>05_06_0212 +
26410330-26410419,26410562-26410846,26411005-26411208,
26411636-26411692,26411859-26412926
Length = 567
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/96 (22%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Frame = +1
Query: 202 MATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEI 381
M T+ K + + +++ V+ + T + R+N R+ T +VP S T+ E++
Sbjct: 273 METESGKLKRNSRRSSAAPVESSQTNIAMETEKSRRNPRKFTSSTADSVPESQLTELEKV 332
Query: 382 DKNLATTDLDELVMNAANAENPEAQLAAVQ--QCRK 483
+NL + + A+ P ++ Q QC K
Sbjct: 333 KRNL--RKVTNSMAEASKVSTPATEIPERQEVQCEK 366
>02_01_0520 + 3761051-3761107,3761420-3761822,3761960-3762129
Length = 209
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +1
Query: 241 KNAGKDVDEMRRRRNE----VTVELRKNKREETLQKRRNVPISYSTDEEE 378
KN GK+ +E + R+ +ELR + E+ ++ + P++ + EEE
Sbjct: 4 KNQGKEEEEKQYRKERDVLWTRIELRDREEEKNTGRQEHAPLNLTAREEE 53
>06_01_0273 +
2022479-2022592,2022830-2022973,2023524-2023601,
2025361-2025585,2025684-2025782,2026177-2026235,
2026351-2026501,2026590-2026754
Length = 344
Score = 28.7 bits (61), Expect = 4.7
Identities = 25/72 (34%), Positives = 36/72 (50%)
Frame = +1
Query: 286 EVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTDLDELVMNAANAENPEAQLAA 465
+V E RK K EE+ VP + EE I K TD +EL+ N + E +
Sbjct: 183 KVENEERKQKDEES----NGVPKVNISPEEAIAKLAKDTD-NELI--EINKQLEELRQMV 235
Query: 466 VQQCRKLLSCDK 501
VQ+CRK+ + +K
Sbjct: 236 VQKCRKMTTYEK 247
>03_05_0211 -
22020515-22020687,22020801-22020831,22022060-22022169,
22022715-22023102,22023344-22023397,22023739-22023849,
22023956-22024015,22024618-22024694,22026155-22026188,
22026267-22027235
Length = 668
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = +1
Query: 244 NAGKDVDEMRRRRNEVTVELRKNKREE---TLQKRRNVPISYSTDEEEIDKNLATTDLDE 414
N K + +R+R K ++ T K+RN + Y TDE+E D + +D +E
Sbjct: 414 NIRKGSNSRKRKRGSTPKSSSKKFDDDDDITPSKKRNKALEYDTDEDEDDADPMKSDSEE 473
>01_03_0071 +
12203227-12203368,12203551-12203703,12204622-12204683,
12204749-12204830,12206029-12206126,12206240-12206657,
12206793-12206915,12207159-12207178
Length = 365
Score = 28.7 bits (61), Expect = 4.7
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Frame = +1
Query: 280 RNEVTVELRKNKRE--ETLQKRRNVPISYSTDEEEIDKNLATTDLDELVMNAANAENPEA 453
RN V+ L+K K + QK + +PI +T+ I + L + +MN ++ +
Sbjct: 171 RNTVSSYLQKYKAYLLKQEQKDQQLPIDDNTNTSSIKSQQGSASLQQQIMNYGENDSMDN 230
Query: 454 QLAAVQQCRKLLSCDKNPPI 513
Q + Q R +K P +
Sbjct: 231 QSIILSQTRYNEHSNKQPKL 250
>01_02_0128 + 11407888-11408241
Length = 117
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 542 GSIPAAMSSSIGGFLSHESSFLHC 471
G + + S + GGF+SH+ S HC
Sbjct: 76 GGVSSTESRARGGFISHDMSLCHC 99
>08_02_0259 -
14974526-14974572,14974670-14974742,14974829-14974891,
14975030-14975097,14975172-14975295,14976434-14976493,
14976744-14976806,14976902-14977942,14978027-14978093,
14978188-14978303,14978454-14978540,14978749-14978838,
14979128-14979214,14979366-14979428,14979509-14979566,
14980174-14980231,14980349-14980416,14980508-14980587,
14981084-14981147,14981321-14981392,14981517-14981576,
14982344-14982398,14982487-14982520,14983845-14983931,
14984036-14984122,14984211-14984408,14984509-14984639,
14984739-14984838
Length = 1066
Score = 28.3 bits (60), Expect = 6.2
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 9/77 (11%)
Frame = +1
Query: 211 DQAKNRMHVFKNAGKDVDEMRRRRNEV-----TVELRKNKREETLQKRRNVPISYSTDE- 372
D A R + + K+ E RR++ T +LRK R+ LQKRR+ I DE
Sbjct: 195 DAANTRKLMERQLSKEEQEEITRRSQAMDKNDTSDLRKFSRQAYLQKRRDKKIDEIRDEI 254
Query: 373 ---EEIDKNLATTDLDE 414
E I +++ T+ +E
Sbjct: 255 LDHEYIFQDVKLTEAEE 271
>12_02_1280 -
27517683-27517871,27517955-27518029,27518155-27518318,
27518424-27518538,27518783-27519074,27519162-27519318,
27519438-27519510,27520309-27520377,27520471-27520694,
27520800-27520981,27521067-27522064,27522335-27522580
Length = 927
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 262 DEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKN 390
+E RRR+ + + R ++ LQK++ + S DEEE++ N
Sbjct: 443 EEARRRKEAIMAKYR----QQQLQKQQLESLPRSNDEEEVEMN 481
>09_06_0001 +
20114108-20115686,20115813-20115928,20116416-20117394,
20118820-20119082
Length = 978
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = +1
Query: 199 KMATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEE 378
++ TD+ K + + K+ +DE+ +R NE + +KN++ + + + I D EE
Sbjct: 635 RVKTDKDKLKKDIQKSKFLSIDEVFKRLNE---QKKKNEKPDLISLFEDQKI-MKQDLEE 690
Query: 379 IDKNLATTDLDE 414
I K L +L E
Sbjct: 691 IRKRLYMLELKE 702
>07_01_0180 + 1266975-1267550
Length = 191
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +1
Query: 250 GKDVDEMRRRRNEVTVELRKNKREETLQKRRNV-PISYSTDEEEIDKNLATTDLDELVMN 426
G+D +E RRRR + R++ R ++R+ V + + DE ++ + LD
Sbjct: 67 GEDGEEERRRRLRRKISNRESARRSRARRRQRVEELERAADELRAERRALASRLDATARR 126
Query: 427 AANAENPEAQ 456
A A+
Sbjct: 127 ALAVRGANAR 136
>02_03_0380 + 18335903-18337837
Length = 644
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 331 QKRRNVPISYSTDEEEIDKNLATTDLDELVMNAA 432
Q++R P+ Y T EEI A LDEL A
Sbjct: 420 QQKREFPLGYKTFGEEIPPQYAIQVLDELTKGEA 453
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,970,402
Number of Sequences: 37544
Number of extensions: 399132
Number of successful extensions: 1223
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1216
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -