Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt7g19
(695 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41992-1|AAA83354.2| 514|Caenorhabditis elegans Importin alpha ... 138 3e-33
AF040995-1|AAB97171.1| 514|Caenorhabditis elegans importin alph... 138 3e-33
U80444-4|AAB37790.1| 531|Caenorhabditis elegans Importin alpha ... 97 1e-20
AF326936-1|AAG49386.1| 531|Caenorhabditis elegans importin beta... 97 1e-20
AF040996-1|AAB97172.1| 531|Caenorhabditis elegans importin alph... 97 1e-20
AF005266-1|AAQ13407.1| 423|Caenorhabditis elegans importin alph... 85 3e-17
Z74043-9|CAA98540.1| 524|Caenorhabditis elegans Hypothetical pr... 47 1e-05
AF040997-1|AAB97173.1| 524|Caenorhabditis elegans importin alph... 47 1e-05
AF024493-2|AAB70323.1| 322|Caenorhabditis elegans Hypothetical ... 39 0.003
AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical ... 33 0.26
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 32 0.45
AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical ... 31 0.60
AF067608-11|AAC17656.2| 368|Caenorhabditis elegans Hypothetical... 31 1.0
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 30 1.4
AF003134-6|AAB54146.3| 827|Caenorhabditis elegans Hypothetical ... 30 1.4
Z75547-11|CAA99905.4| 394|Caenorhabditis elegans Hypothetical p... 30 1.8
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 30 1.8
AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical ... 30 1.8
Z73908-4|CAA98127.2| 447|Caenorhabditis elegans Hypothetical pr... 29 2.4
AF003389-4|AAN63407.1| 598|Caenorhabditis elegans Hypothetical ... 29 3.2
AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical ... 29 3.2
AC006621-3|AAK68263.1| 368|Caenorhabditis elegans Hypothetical ... 29 3.2
Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z81552-3|CAB04486.1| 470|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z79755-7|CAB02103.1| 466|Caenorhabditis elegans Hypothetical pr... 29 4.2
U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1 prepropro... 29 4.2
AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical... 29 4.2
L23645-8|AAK26133.1| 282|Caenorhabditis elegans Peroxisome asse... 28 5.5
Z82278-10|CAC15860.2| 390|Caenorhabditis elegans Hypothetical p... 28 7.3
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 28 7.3
AL132943-14|CAC14395.2| 390|Caenorhabditis elegans Hypothetical... 28 7.3
Z81546-3|CAB04451.1| 321|Caenorhabditis elegans Hypothetical pr... 27 9.7
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 27 9.7
AF047661-2|AAK71389.1| 886|Caenorhabditis elegans Hypothetical ... 27 9.7
AC024791-8|AAF60652.1| 230|Caenorhabditis elegans Hypothetical ... 27 9.7
AC024761-2|AAF59463.1| 174|Caenorhabditis elegans Hypothetical ... 27 9.7
>U41992-1|AAA83354.2| 514|Caenorhabditis elegans Importin alpha
family protein 3 protein.
Length = 514
Score = 138 bits (335), Expect = 3e-33
Identities = 74/145 (51%), Positives = 93/145 (64%), Gaps = 2/145 (1%)
Frame = +1
Query: 217 AKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLA 396
+ NR +KN K+ + +RNE V +RK+KREE + KRRN+ D E
Sbjct: 2 SSNRQAYYKNNAKE-QIGKEKRNEEVVSIRKDKREEAISKRRNINTQIEDDSETSTTPPG 60
Query: 397 TTDLD--ELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQCLSRA 570
D + L + AA + +P QL AVQQ RK+LS D+NPPID+LI +GILP+LVQCLS
Sbjct: 61 PFDANLLRLTVAAAQSSDPAEQLTAVQQARKMLSTDRNPPIDDLIGSGILPVLVQCLSST 120
Query: 571 DNPALQFETAWALTNIASGTSAQTK 645
D P LQFE AWALTNIASGTS QT+
Sbjct: 121 D-PNLQFEAAWALTNIASGTSEQTQ 144
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = +2
Query: 650 VVHAGAVPVFLQLL 691
VV+AGAVP+FLQLL
Sbjct: 146 VVNAGAVPLFLQLL 159
>AF040995-1|AAB97171.1| 514|Caenorhabditis elegans importin alpha 3
protein.
Length = 514
Score = 138 bits (335), Expect = 3e-33
Identities = 74/145 (51%), Positives = 93/145 (64%), Gaps = 2/145 (1%)
Frame = +1
Query: 217 AKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLA 396
+ NR +KN K+ + +RNE V +RK+KREE + KRRN+ D E
Sbjct: 2 SSNRQAYYKNNAKE-QIGKEKRNEEVVSIRKDKREEAISKRRNINTQIEDDSETSTTPPG 60
Query: 397 TTDLD--ELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQCLSRA 570
D + L + AA + +P QL AVQQ RK+LS D+NPPID+LI +GILP+LVQCLS
Sbjct: 61 PFDANLLRLTVAAAQSSDPAEQLTAVQQARKMLSTDRNPPIDDLIGSGILPVLVQCLSST 120
Query: 571 DNPALQFETAWALTNIASGTSAQTK 645
D P LQFE AWALTNIASGTS QT+
Sbjct: 121 D-PNLQFEAAWALTNIASGTSEQTQ 144
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = +2
Query: 650 VVHAGAVPVFLQLL 691
VV+AGAVP+FLQLL
Sbjct: 146 VVNAGAVPLFLQLL 159
>U80444-4|AAB37790.1| 531|Caenorhabditis elegans Importin alpha
family protein 2 protein.
Length = 531
Score = 96.7 bits (230), Expect = 1e-20
Identities = 60/149 (40%), Positives = 85/149 (57%), Gaps = 10/149 (6%)
Frame = +1
Query: 226 RMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNV--------PISYSTDEEEI 381
R+ +KN K +E+RRRR E +VE+RK K + + KRRN+ S + E+I
Sbjct: 21 RLQQYKNLTKH-EELRRRRTECSVEIRKQKGADMMMKRRNIVDVDEGGNSESELEEPEKI 79
Query: 382 DKNLATTDLDELVMNAANAENP--EAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQ 555
++T L + A + NP + + + RK LS KNPPIDE+I G+L LVQ
Sbjct: 80 SHQQSSTRLSNDEIRAILSNNPSEDDMVRCFESLRKSLSKTKNPPIDEVIHCGLLQALVQ 139
Query: 556 CLSRADNPALQFETAWALTNIASGTSAQT 642
LS +N +Q+E AWALTNI SG++ QT
Sbjct: 140 ALS-VENERVQYEAAWALTNIVSGSTEQT 167
Score = 37.5 bits (83), Expect = 0.009
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +1
Query: 511 IDELIAAGILPILVQCLSRADNPALQFETAWALTNIASG 627
I ++ A +LP+L+ L D+ QFE +WAL+N+A G
Sbjct: 380 IQAVLDANLLPVLINVLKSGDHKC-QFEASWALSNLAQG 417
>AF326936-1|AAG49386.1| 531|Caenorhabditis elegans importin beta
binding domain proteinprotein.
Length = 531
Score = 96.7 bits (230), Expect = 1e-20
Identities = 60/149 (40%), Positives = 85/149 (57%), Gaps = 10/149 (6%)
Frame = +1
Query: 226 RMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNV--------PISYSTDEEEI 381
R+ +KN K +E+RRRR E +VE+RK K + + KRRN+ S + E+I
Sbjct: 21 RLQQYKNLTKH-EELRRRRTECSVEIRKQKGADMMMKRRNIVDVDEGGNSESELEEPEKI 79
Query: 382 DKNLATTDLDELVMNAANAENP--EAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQ 555
++T L + A + NP + + + RK LS KNPPIDE+I G+L LVQ
Sbjct: 80 SHQQSSTRLSNDEIRAILSNNPSEDDMVRCFESLRKSLSKTKNPPIDEVIHCGLLQALVQ 139
Query: 556 CLSRADNPALQFETAWALTNIASGTSAQT 642
LS +N +Q+E AWALTNI SG++ QT
Sbjct: 140 ALS-VENERVQYEAAWALTNIVSGSTEQT 167
Score = 37.5 bits (83), Expect = 0.009
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +1
Query: 511 IDELIAAGILPILVQCLSRADNPALQFETAWALTNIASG 627
I ++ A +LP+L+ L D+ QFE +WAL+N+A G
Sbjct: 380 IQAVLDANLLPVLINVLKSGDHKC-QFEASWALSNLAQG 417
>AF040996-1|AAB97172.1| 531|Caenorhabditis elegans importin alpha 2
protein.
Length = 531
Score = 96.7 bits (230), Expect = 1e-20
Identities = 60/149 (40%), Positives = 85/149 (57%), Gaps = 10/149 (6%)
Frame = +1
Query: 226 RMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNV--------PISYSTDEEEI 381
R+ +KN K +E+RRRR E +VE+RK K + + KRRN+ S + E+I
Sbjct: 21 RLQQYKNLTKH-EELRRRRTECSVEIRKQKGADMMMKRRNIVDVDEGGNSESELEEPEKI 79
Query: 382 DKNLATTDLDELVMNAANAENP--EAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQ 555
++T L + A + NP + + + RK LS KNPPIDE+I G+L LVQ
Sbjct: 80 SHQQSSTRLSNDEIRAILSNNPSEDDMVRCFESLRKSLSKTKNPPIDEVIHCGLLQALVQ 139
Query: 556 CLSRADNPALQFETAWALTNIASGTSAQT 642
LS +N +Q+E AWALTNI SG++ QT
Sbjct: 140 ALS-VENERVQYEAAWALTNIVSGSTEQT 167
Score = 37.5 bits (83), Expect = 0.009
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +1
Query: 511 IDELIAAGILPILVQCLSRADNPALQFETAWALTNIASG 627
I ++ A +LP+L+ L D+ QFE +WAL+N+A G
Sbjct: 380 IQAVLDANLLPVLINVLKSGDHKC-QFEASWALSNLAQG 417
>AF005266-1|AAQ13407.1| 423|Caenorhabditis elegans importin alpha-3
subunit protein.
Length = 423
Score = 85.4 bits (202), Expect = 3e-17
Identities = 40/54 (74%), Positives = 46/54 (85%)
Frame = +1
Query: 484 LLSCDKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTK 645
+LS D+NPPID+LI +GILP+LVQCLS D P LQFE AWALTNIASGTS QT+
Sbjct: 1 MLSTDRNPPIDDLIGSGILPVLVQCLSSTD-PNLQFEAAWALTNIASGTSEQTQ 53
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = +2
Query: 650 VVHAGAVPVFLQLL 691
VV+AGAVP+FLQLL
Sbjct: 55 VVNAGAVPLFLQLL 68
>Z74043-9|CAA98540.1| 524|Caenorhabditis elegans Hypothetical
protein T19B10.7 protein.
Length = 524
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/58 (34%), Positives = 36/58 (62%)
Frame = +1
Query: 220 KNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNL 393
+ R ++K+ +D +EMRR+R E V++RKN+R+E ++ R + + S EE + L
Sbjct: 10 EERSKMYKSNVRDQNEMRRKRREDEVQIRKNRRDEKFERNRQITVQRSLSHEETSELL 67
>AF040997-1|AAB97173.1| 524|Caenorhabditis elegans importin alpha 1
protein.
Length = 524
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/58 (34%), Positives = 36/58 (62%)
Frame = +1
Query: 220 KNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNL 393
+ R ++K+ +D +EMRR+R E V++RKN+R+E ++ R + + S EE + L
Sbjct: 10 EERSKMYKSNVRDQNEMRRKRREDEVQIRKNRRDEKFERNRQITVQRSLSHEETSELL 67
>AF024493-2|AAB70323.1| 322|Caenorhabditis elegans Hypothetical
protein F23F1.5 protein.
Length = 322
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/63 (31%), Positives = 35/63 (55%)
Frame = +1
Query: 226 RMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTD 405
R +KN K ++ +RR E T+E +KN R +T K RN+ T +E+ ++ + TT
Sbjct: 28 RYSQYKNLTKAAEQQAKRREE-TLERQKNGRFDTFMKLRNLAFDDVTSDEDDEQKIETTT 86
Query: 406 LDE 414
++
Sbjct: 87 AEK 89
>AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical
protein Y113G7C.1 protein.
Length = 1494
Score = 32.7 bits (71), Expect = 0.26
Identities = 20/69 (28%), Positives = 37/69 (53%)
Frame = +1
Query: 181 ETASTDKMATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISY 360
+ A ++ D+ + +M+V + A KD E R ++++ E R+ K EE +K +
Sbjct: 1033 QDADIERAEADEQRRKMNV-ERAKKD--EERAKKDKRDAEERRKKDEERAKKDKEDAKKA 1089
Query: 361 STDEEEIDK 387
D+E+IDK
Sbjct: 1090 KEDQEKIDK 1098
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 31.9 bits (69), Expect = 0.45
Identities = 21/96 (21%), Positives = 48/96 (50%)
Frame = +1
Query: 196 DKMATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEE 375
DK + K + ++ D EM RRR + + K +++ +++R V S S DE+
Sbjct: 230 DKKKWKKNKAKRSKRDDSSDDDSEMERRRKKSKKSKKSKKFKKSEKRKRAVNDSSSDDED 289
Query: 376 EIDKNLATTDLDELVMNAANAENPEAQLAAVQQCRK 483
E +K + + + +++E+ E + ++ ++ +K
Sbjct: 290 EEEKPEKRSKKSKKAVIDSSSEDEEEEKSSKKRSKK 325
>AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical
protein Y108G3AL.7 protein.
Length = 1192
Score = 31.5 bits (68), Expect = 0.60
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = +1
Query: 307 KNKREETLQKRRNVPISYSTDEEEIDKNLATTDLDELVMNAANA 438
+ +R + +KR++ S T +EE ++LATTD + V+N A++
Sbjct: 260 ERERARSRRKRKDEASSAVTSDEEDQEDLATTDSENPVINGASS 303
>AF067608-11|AAC17656.2| 368|Caenorhabditis elegans Hypothetical
protein B0511.11 protein.
Length = 368
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +1
Query: 313 KREETLQKRRNVPIS--YSTDEEEIDKNLATTDLDE 414
K+E+ KR NVP++ YS + KN +TT L E
Sbjct: 98 KKEDDKSKRENVPLTVVYSNPSISVSKNFSTTPLAE 133
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 30.3 bits (65), Expect = 1.4
Identities = 28/123 (22%), Positives = 55/123 (44%), Gaps = 2/123 (1%)
Frame = +1
Query: 178 VETASTDKMATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKN-KREETLQKRRNVPI 354
+E+ ++ + K R K+ +EMR+R ++ E+R N +R + ++K
Sbjct: 197 MESEVDQQLELTEMKARQEERDRLTKEKEEMRQRMSDEMSEMRNNIERLQKMEKALEREN 256
Query: 355 SYSTDEEEIDKNLATTDLDELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIA-A 531
++E+ L + + + AEN +LA ++ + C+ + DEL A
Sbjct: 257 ERLNHQKELSDKLKVVNEENNDLRQNLAEN-HLELAMIKSELAQVRCEFDQKQDELSARR 315
Query: 532 GIL 540
GIL
Sbjct: 316 GIL 318
>AF003134-6|AAB54146.3| 827|Caenorhabditis elegans Hypothetical
protein ZC581.9 protein.
Length = 827
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = -3
Query: 252 ACILEHMHAVFRLISRHFICARCLDTV 172
A ILE+M A+FR +S F+ +CLD +
Sbjct: 447 AFILENMSALFRRLSDEFVEDKCLDVI 473
>Z75547-11|CAA99905.4| 394|Caenorhabditis elegans Hypothetical
protein R11D1.10a protein.
Length = 394
Score = 29.9 bits (64), Expect = 1.8
Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Frame = +1
Query: 199 KMATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRR-----NVPISYS 363
++A D+A+ + KD DE+ RR ++ + ++ RE+ R N S +
Sbjct: 200 RVAEDRARIEKKEEEMEHKDWDELEARRRKIFEDEKEKNREDDASIRESMVSANTEFSEA 259
Query: 364 TDEEEIDKNLATTDLDELVMNAANAENPE-AQLAAVQQCRKLLSCD 498
T EE + N D ++ V E + A+L + + + S D
Sbjct: 260 TKEEMNEINNILQDAEQRVAETKKQEEHDAAELRTLMKSTRQKSLD 305
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +1
Query: 184 TASTDKMATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRK-NKREETLQKRRNVPISY 360
TA +DK Q + H KNA D+ E +RR E+ E ++ + R + K N +
Sbjct: 807 TAISDKENRSQIEME-HKLKNAESDLQEAKRRAEEIGAEKKELSDRLNEMLKNLNQSMQK 865
Query: 361 STDEEEI 381
S + +++
Sbjct: 866 SAENDKM 872
>AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical
protein R148.3b protein.
Length = 1130
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +1
Query: 184 TASTDKMATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRK-NKREETLQKRRNVPISY 360
TA +DK Q + H KNA D+ E +RR E+ E ++ + R + K N +
Sbjct: 819 TAISDKENRSQIEME-HKLKNAESDLQEAKRRAEEIGAEKKELSDRLNEMLKNLNQSMQK 877
Query: 361 STDEEEI 381
S + +++
Sbjct: 878 SAENDKM 884
>Z73908-4|CAA98127.2| 447|Caenorhabditis elegans Hypothetical
protein F53B2.5 protein.
Length = 447
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +1
Query: 523 IAAGILPILVQCLSRADNPALQFETAWALTNIASG-TSAQTKQSSP 657
+ + L IL++ L R+ N L +T WA+ NIA+ +S + K SP
Sbjct: 80 VNSNCLDILIK-LVRSQNARLSSQTVWAIANIAADCSSCKLKCRSP 124
>AF003389-4|AAN63407.1| 598|Caenorhabditis elegans Hypothetical
protein F23H11.4b protein.
Length = 598
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +1
Query: 295 VELRKNKREETLQKR-RNVPISYSTDEEEIDKNLATTDLDELVMNAANAENPEAQLAAVQ 471
V L +K+E+ L R RN+ +S+ DE+ + + T D+ + + A + L V
Sbjct: 341 VSLTSSKKEKRLHCRLRNMQLSFHDDEDSTEPSNGTFDIKGIYLFRHMASDTPYILIHVG 400
Query: 472 QCRKLLS-CDKNPP 510
+ R ++S ++PP
Sbjct: 401 EKRNVISFIPEDPP 414
>AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical
protein F23H11.4a protein.
Length = 1003
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +1
Query: 295 VELRKNKREETLQKR-RNVPISYSTDEEEIDKNLATTDLDELVMNAANAENPEAQLAAVQ 471
V L +K+E+ L R RN+ +S+ DE+ + + T D+ + + A + L V
Sbjct: 341 VSLTSSKKEKRLHCRLRNMQLSFHDDEDSTEPSNGTFDIKGIYLFRHMASDTPYILIHVG 400
Query: 472 QCRKLLS-CDKNPP 510
+ R ++S ++PP
Sbjct: 401 EKRNVISFIPEDPP 414
>AC006621-3|AAK68263.1| 368|Caenorhabditis elegans Hypothetical
protein C52A10.3 protein.
Length = 368
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -3
Query: 525 YELINRRVFITREQFSALLHS 463
YEL+ R +F+T EQ S +L+S
Sbjct: 199 YELVGREIFLTSEQLSKVLNS 219
>Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical protein
H06O01.2 protein.
Length = 1461
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +1
Query: 154 LCVITTYCVETASTDKMATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQ 333
L V Y ++ S DK+ T + K R + ++ +R N V E K K+E+ +
Sbjct: 1205 LQVRVDYLLKLMSKDKVKTTEKKERKRKADDVPVGPEKKKRHTNNVPQEGEKKKKEKKEE 1264
Query: 334 K 336
K
Sbjct: 1265 K 1265
>Z81552-3|CAB04486.1| 470|Caenorhabditis elegans Hypothetical
protein F56G4.4 protein.
Length = 470
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/94 (20%), Positives = 38/94 (40%)
Frame = +1
Query: 178 VETASTDKMATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPIS 357
VE ++ D+ N+ K RRR + T +R ++ +V
Sbjct: 267 VEANRKEQNYVDKPNNKFKKLTKEEKKAQWEERRRQKDTERAEDEERRREAEEDEDVSDE 326
Query: 358 YSTDEEEIDKNLATTDLDELVMNAANAENPEAQL 459
S ++EE + + T + + LV+ ++ P +L
Sbjct: 327 ESDEDEEEFEIIGTPEREALVLREHSSTPPPEEL 360
>Z79755-7|CAB02103.1| 466|Caenorhabditis elegans Hypothetical
protein F43G9.10 protein.
Length = 466
Score = 28.7 bits (61), Expect = 4.2
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = +1
Query: 241 KNAGKDVDEMRRRRNEVTVE--LRKNKREETLQKRRNV--PISYSTDEEEIDKNLATTDL 408
+ +D D RRRR E + E R+++R E +RR V P E+E +N ++
Sbjct: 69 RETDRDDDRRRRRRRESSDEEDRRRHRRHEDYGRRRQVEKPEVLGKVEDESSENEQESEE 128
Query: 409 DE 414
DE
Sbjct: 129 DE 130
>U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1
preproprotein protein.
Length = 1042
Score = 28.7 bits (61), Expect = 4.2
Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 2/79 (2%)
Frame = -1
Query: 638 CADVPEAMFVKAQAVSNCNAGLSALERH*TRMGSIPAAMSSSIGGFLSHESSFLHCCTAA 459
C + A +NC +G + M S+ +A + S HC T A
Sbjct: 626 CKSIASAAVGLTSDGTNCASGRVCVAGSCVEMSSVSSATACPTNNLALLCSGHGHCTTTA 685
Query: 458 NCA--SGFSALAAFITSSS 408
C +G+S +A I S+S
Sbjct: 686 RCVCFNGWSGVACDIRSNS 704
>AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical
protein Y37D8A.13 protein.
Length = 1042
Score = 28.7 bits (61), Expect = 4.2
Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 2/79 (2%)
Frame = -1
Query: 638 CADVPEAMFVKAQAVSNCNAGLSALERH*TRMGSIPAAMSSSIGGFLSHESSFLHCCTAA 459
C + A +NC +G + M S+ +A + S HC T A
Sbjct: 626 CKSIASAAVGLTSDGTNCASGRVCVAGSCVEMSSVSSATACPTNNLALLCSGHGHCTTTA 685
Query: 458 NCA--SGFSALAAFITSSS 408
C +G+S +A I S+S
Sbjct: 686 RCVCFNGWSGVACDIRSNS 704
>L23645-8|AAK26133.1| 282|Caenorhabditis elegans Peroxisome
assembly factor protein19 protein.
Length = 282
Score = 28.3 bits (60), Expect = 5.5
Identities = 21/80 (26%), Positives = 31/80 (38%)
Frame = +1
Query: 241 KNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTDLDELV 420
+ A KD +M + + E K + + P+ D E + A L E
Sbjct: 56 QKAAKDFQKMLEQMVTLQEEAMKKAGADPSEGEGEQPLD-PNDPEALAMMDALKQLMECS 114
Query: 421 MNAANAENPEAQLAAVQQCR 480
N ANA NPE +A + R
Sbjct: 115 SNVANASNPEEFMAGLDMLR 134
>Z82278-10|CAC15860.2| 390|Caenorhabditis elegans Hypothetical
protein Y116F11B.2 protein.
Length = 390
Score = 27.9 bits (59), Expect = 7.3
Identities = 20/83 (24%), Positives = 30/83 (36%), Gaps = 3/83 (3%)
Frame = +1
Query: 454 QLAAVQQCRK--LLSCDKNPPIDEL-IAAGILPILVQCLSRADNPALQFETAWALTNIAS 624
Q ++ QC S D P +E + AG+ P+ + C N + +
Sbjct: 109 QCSSTFQCPSGTFASFDYGEPTEESGVNAGMDPVTITCAETGANVGRWWYNRYDSVQTYL 168
Query: 625 GTSAQTKQSSPCRCSTCIPSALD 693
K SP CS C P+ D
Sbjct: 169 NKVTCRKTPSPTTCSVCAPTIYD 191
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
protein F36F2.3a protein.
Length = 1128
Score = 27.9 bits (59), Expect = 7.3
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +1
Query: 253 KDVDEMRR---RRNEVTVELRKNKREETLQKRRNVPISYSTDEEEID 384
+D D+ RR RR++V + R+ KREE ++ + S DE+EID
Sbjct: 585 RDRDDARRKDRRRDDVRKKERREKREEEDDDQKTKD-AESKDEDEID 630
>AL132943-14|CAC14395.2| 390|Caenorhabditis elegans Hypothetical
protein Y116F11B.2 protein.
Length = 390
Score = 27.9 bits (59), Expect = 7.3
Identities = 20/83 (24%), Positives = 30/83 (36%), Gaps = 3/83 (3%)
Frame = +1
Query: 454 QLAAVQQCRK--LLSCDKNPPIDEL-IAAGILPILVQCLSRADNPALQFETAWALTNIAS 624
Q ++ QC S D P +E + AG+ P+ + C N + +
Sbjct: 109 QCSSTFQCPSGTFASFDYGEPTEESGVNAGMDPVTITCAETGANVGRWWYNRYDSVQTYL 168
Query: 625 GTSAQTKQSSPCRCSTCIPSALD 693
K SP CS C P+ D
Sbjct: 169 NKVTCRKTPSPTTCSVCAPTIYD 191
>Z81546-3|CAB04451.1| 321|Caenorhabditis elegans Hypothetical
protein F53A2.3 protein.
Length = 321
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = -3
Query: 198 ICARCLDTVRGNYTKKQRINIKLLSSKLIKHVLRHYTSDGGLTS 67
+ RCL +V G +NI LL + + ++ H S G+T+
Sbjct: 265 LLVRCL-SVTGGDNSSNAVNISLLFKQHVSNLFNHARSKSGITN 307
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 27.5 bits (58), Expect = 9.7
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = -3
Query: 243 LEHMHAVFRLISR--HFICARCLDTVRGNYTKKQRINIKLLSSKLIKHVLRHYTSDGGLT 70
LEH F + + + IC R LD R YT N+ L +++I V DG L
Sbjct: 200 LEHSDCSFMVDNEAIYDICRRNLDLARPTYT-----NLNRLIAQVISSVTASLRFDGALN 254
Query: 69 SIFTKYST 46
T++ T
Sbjct: 255 VDLTEFQT 262
>AF047661-2|AAK71389.1| 886|Caenorhabditis elegans Hypothetical
protein M70.3b protein.
Length = 886
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1
Query: 520 LIAAGILPILVQCLSRADNPALQFETA 600
LI GIL I V C+S +P+ Q ETA
Sbjct: 6 LIIIGILLISVFCISSGSSPSKQSETA 32
>AC024791-8|AAF60652.1| 230|Caenorhabditis elegans Hypothetical
protein Y47G6A.9 protein.
Length = 230
Score = 27.5 bits (58), Expect = 9.7
Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 6/108 (5%)
Frame = +1
Query: 211 DQAKNRMHVFKNAGKDV--DEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEI- 381
D+ K + + N ++ +M NE+ +K +E+L KRR V S +E++
Sbjct: 95 DEIKRYLDKYSNIKREKLSIDMSHMPNELIWRRASSKSKESLAKRRKVANDDSMIKEKLK 154
Query: 382 ---DKNLATTDLDELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPID 516
+K D D+ A N ++ ++ +A ++ LS D N D
Sbjct: 155 KLEEKEAQNKDDDDDDEKADNDKDSGSEKSAAEEEENPLSDDDNQEED 202
>AC024761-2|AAF59463.1| 174|Caenorhabditis elegans Hypothetical
protein Y38C1AA.9 protein.
Length = 174
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/74 (21%), Positives = 32/74 (43%)
Frame = +1
Query: 256 DVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTDLDELVMNAAN 435
+VD++ + VE+ + EE K+R V + +E + + + A L E
Sbjct: 29 EVDDVGNKTISGEVEISDVEAEEKTDKKREVDANDIQEEVKAELDKAVESLKETAREREE 88
Query: 436 AENPEAQLAAVQQC 477
EN ++++ C
Sbjct: 89 EENSLLSRSSLESC 102
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,431,369
Number of Sequences: 27780
Number of extensions: 359081
Number of successful extensions: 1363
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1342
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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