Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt7f24
         (611 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    25   1.5  
L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier prot...    25   2.5  
L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier prot...    25   2.5  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    25   2.5  
AY227001-1|AAO32818.2|  301|Anopheles gambiae ADP/ATP translocas...    25   2.5  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    24   4.4  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   7.8  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   7.8  

>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 4/45 (8%)
 Frame = +1

Query: 451 TVAVVIAHPFHVVSVRMMASFIGERR----TLQLAVGRYSLYLXG 573
           TV      P H V V  + SF GER     T    VG Y + L G
Sbjct: 410 TVIATDGEPVHPVQVNTIISFSGERYDFVITADQPVGAYWIQLRG 454


>L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 232 IKYIKASDGFFGCYRGLSARMLGLI 306
           +K    SDG  G YRG +  + G+I
Sbjct: 163 LKKTVKSDGIIGLYRGFNVSVQGII 187


>L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 232 IKYIKASDGFFGCYRGLSARMLGLI 306
           +K    SDG  G YRG +  + G+I
Sbjct: 163 LKKTVKSDGIIGLYRGFNVSVQGII 187


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 9/35 (25%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = +1

Query: 349 IDLPEINDPPNIVTD-DEPKVEDYIKLGRRDMIMQ 450
           ++LPE+++P N + +  + +  + ++  R +M+MQ
Sbjct: 577 VELPEVDNPSNTINERHDQRYANTLQELRNEMVMQ 611


>AY227001-1|AAO32818.2|  301|Anopheles gambiae ADP/ATP translocase
           protein.
          Length = 301

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 232 IKYIKASDGFFGCYRGLSARMLGLI 306
           +K    SDG  G YRG +  + G+I
Sbjct: 163 LKKTVKSDGIIGLYRGFNVSVQGII 187


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 4/45 (8%)
 Frame = +1

Query: 451 TVAVVIAHPFHVVSVRMMASFIGERR----TLQLAVGRYSLYLXG 573
           TV      P H   V  + SF GER     T    VG Y + L G
Sbjct: 410 TVIATDGEPVHPAQVNTIISFSGERYDFVITADQPVGAYWIQLRG 454


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 6/43 (13%)
 Frame = +1

Query: 157 EPLAPRRSTTLFGRPAMILPNVF-----QYIKYIKAS-DGFFG 267
           +PL P   T     P + LPN F     +Y++Y     + FFG
Sbjct: 417 QPLNPHAGTVELSIPLIELPNAFGVSVRKYVQYKNIPFESFFG 459


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +2

Query: 524  EEHYSSLLGAIVSIYXDDGILGFL 595
            E +  S++ A V +Y DD ++GF+
Sbjct: 2554 ENNAPSVVRATVFVYADDRLVGFV 2577


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 676,388
Number of Sequences: 2352
Number of extensions: 14658
Number of successful extensions: 34
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59711994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)