Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt7f21
         (675 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    25   2.2  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   6.7  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   6.7  

>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +1

Query: 541 KSSWLKFQKESLSPSNGEENHCLSVTG 621
           K  +L F++++ SPS  E+N  LS+ G
Sbjct: 660 KPFYLMFKRKNASPSLKEDNSLLSLIG 686


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -1

Query: 234 LKFLARAGRPFSRRVLVRP 178
           L FLAR GRP  + + VRP
Sbjct: 728 LHFLARVGRPGWKWMSVRP 746


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +3

Query: 141  STQVVANSLKPLVVVPTPSEKTVVLPLPKTSTVET 245
            ST  +A ++ P  V  +PS  T   P   TST  T
Sbjct: 928  STSAMAATIVPNPVQASPSPATAPAPAKTTSTDST 962


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 698,841
Number of Sequences: 2352
Number of extensions: 14856
Number of successful extensions: 37
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)