Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt7f20
(741 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1039.07c |||4-aminobutyrate aminotransferase |Schizosaccharo... 132 4e-32
SPBC21C3.08c |||ornithine aminotransferase|Schizosaccharomyces p... 126 4e-30
SPAC27F1.05c |||aminotransferase class-III, unknown specificty|S... 102 6e-23
SPBC1773.03c |||aminotransferase class-III, unknown specificty|S... 94 2e-20
SPCC777.09c |arg1||acetylornithine aminotransferase|Schizosaccha... 89 6e-19
SPAC19D5.07 |uga1||4-aminobutyrate aminotransferase |Schizosacch... 70 4e-13
SPCC417.11c |||glutamate-1-semialdehyde 2,1-aminomutaseaminotran... 30 0.30
SPBC713.12 |erg1||squalene monooxygenase Erg1 |Schizosaccharomyc... 30 0.30
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 30 0.40
SPBC13G1.10c |mug81||ATP-dependent RNA helicase Slh1|Schizosacch... 29 0.53
SPBC15C4.02 |||ABC1 kinase family protein|Schizosaccharomyces po... 29 0.53
SPBC4C3.05c |nuc1|rpa1|DNA-directed RNA polymerase I complex lar... 29 0.70
SPBPB8B6.06c ||SPAPB8B6.06c, SPAPB8B6.06c|conserved fungal prote... 27 2.8
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 27 2.8
SPAC977.11 |||conserved fungal protein|Schizosaccharomyces pombe... 27 2.8
SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomy... 27 3.7
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 26 4.9
SPBC336.01 |fbh1|fdh1, fdh|DNA helicase I|Schizosaccharomyces po... 26 4.9
SPCC126.01c ||SPCC576.18c|conserved fungal protein|Schizosacchar... 26 4.9
SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyce... 25 8.6
>SPAC1039.07c |||4-aminobutyrate aminotransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 132 bits (320), Expect = 4e-32
Identities = 71/208 (34%), Positives = 118/208 (56%), Gaps = 5/208 (2%)
Frame = +2
Query: 2 GYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKPDIVTMAKGIGNGFPLAA 181
GYLK ++ ++ G L + DE QTG GRTG F FE HG+ PDI+T++K +G G LAA
Sbjct: 232 GYLKALKKKCEERGMLLIIDEAQTGIGRTGSMF-SFEHHGIVPDILTLSKSLGAGTALAA 290
Query: 182 VVTTKEI--AANHAKAAYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEYFIRQLM 355
V+T++EI ++ T +P+ + +G VL+V++ + L + +K+ GE L+
Sbjct: 291 VITSEEIEKVCYDNGFVFYTTHASDPLPAAIGSTVLKVVKRDNLVEKAKISGELLRSDLL 350
Query: 356 DLQKQHPVIGDVRGQGLMIGVEL---VEPGTKTPLTTSKVNDIHENIKDNGVLIARGGRF 526
L+ +HP+I DVRG GL+ G+E+ +P + + + D + N ++ G
Sbjct: 351 RLKDKHPLIVDVRGLGLLQGIEIASCTDPSKPSDFLGTVIGDKCLELGMNCNIVHLRG-I 409
Query: 527 NNVFRIKPPMCITKQDVDFGISIINDAI 610
VFRI PP+ +T +++ I I + A+
Sbjct: 410 GGVFRIAPPLTVTDEEIHKAIEIFDSAL 437
>SPBC21C3.08c |||ornithine aminotransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 438
Score = 126 bits (303), Expect = 4e-30
Identities = 75/204 (36%), Positives = 121/204 (59%), Gaps = 1/204 (0%)
Frame = +2
Query: 2 GYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKPDIVTMAKGIGNG-FPLA 178
GYL++A +L K + L++ADEVQTG RTG E VKPD+V + K I G +P++
Sbjct: 227 GYLEEAYKLCKAHNVLFIADEVQTGVARTGKMLC-IEHSNVKPDVVILGKAISGGVYPVS 285
Query: 179 AVVTTKEIAANHAKAAYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEYFIRQLMD 358
AV++++EI N + +T+GGNP+ + V A LEV++EE L + + V+GE F L++
Sbjct: 286 AVLSSREIMLNFEPGTHGSTYGGNPLGAAVSIAALEVVKEEKLTERAAVLGEKFRTALIE 345
Query: 359 LQKQHPVIGDVRGQGLMIGVELVEPGTKTPLTTSKVNDIHENIKDNGVLIARGGRFNNVF 538
+ P++ VRG+GL+ V + E +KT T+ D+ ++ GVL N+
Sbjct: 346 CKS--PIVQKVRGRGLLNAVVIDE--SKTNGRTAW--DLCLIMRSRGVLAK--PTHGNII 397
Query: 539 RIKPPMCITKQDVDFGISIINDAI 610
R PP+ IT++D+ GI +I ++
Sbjct: 398 RFSPPLVITEEDLMKGIEVIKKSL 421
>SPAC27F1.05c |||aminotransferase class-III, unknown
specificty|Schizosaccharomyces pombe|chr 1|||Manual
Length = 484
Score = 102 bits (244), Expect = 6e-23
Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 10/215 (4%)
Frame = +2
Query: 2 GYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKPDIVTMAKGIGNG-FPLA 178
GYL KA+EL K V DE+QTG GRTG FW E + PD + AKG G P A
Sbjct: 257 GYLAKARELCTKYDTYLVLDEIQTGCGRTG-KFWACEYENIIPDCIAFAKGFSGGLIPFA 315
Query: 179 AVVTTKEI---AANHAKAAYFN--TFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEYFI 343
+ T+E+ A N + A+ + T+ N + G A ++ I + L + +G
Sbjct: 316 GYIATEELWNAAYNSLETAFLHTATYQENTLGLAAGVATIDYIVQNDLLSRCRKLGGIMF 375
Query: 344 RQLMDLQKQHP-VIGDVRGQGLMIGVEL--VEPGTKTPLTTSKVNDIHENIKDN-GVLIA 511
+L LQ + P V+ DVRG+G+++G+E + + I ++ D V +
Sbjct: 376 DRLNKLQTKFPHVMKDVRGRGMIVGIEFYPIPESVQEEFGEYYATPIVNDLADTYHVQVY 435
Query: 512 RGGRFNNVFRIKPPMCITKQDVDFGISIINDAIKK 616
+VFR PP+ I + D+D G+S + A+ K
Sbjct: 436 CSLNNPSVFRFLPPLTIPEADLDEGLSAVESAVAK 470
>SPBC1773.03c |||aminotransferase class-III, unknown
specificty|Schizosaccharomyces pombe|chr 2|||Manual
Length = 459
Score = 94.3 bits (224), Expect = 2e-20
Identities = 65/221 (29%), Positives = 110/221 (49%), Gaps = 14/221 (6%)
Frame = +2
Query: 2 GYLKKAQELIKKNGGLYVADEVQTGFGRTGD-HFWGFETHGVKPDIVTMAKGIGNGF-PL 175
GY K +++ K G ++ DEV +G GRTG H W E GV PDI ++AK +G G+ P+
Sbjct: 237 GYFKAMRKVCDKYGVIFYLDEVMSGIGRTGTMHAW--EQEGVTPDIQSIAKCLGGGYQPI 294
Query: 176 AAVVTTKEIA----ANHAKAAYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEYFI 343
+ + I A A F T+ +P+A + AV ++ + L + + +G+Y
Sbjct: 295 SGALVGHRIMNVFEQKDAAMAGFFTYQAHPIACSAALAVQTILRRDHLVERAAEMGKYLS 354
Query: 344 RQLMDLQKQHPVIGDVRGQGLMIGVELV-EPGTKTPLTTS-KVNDIHENIK-DNGVLIAR 514
+L + HP +G++RG+GL G+E+V + TK KV + I ++GV +
Sbjct: 355 EKLHETFDSHPNVGNIRGRGLFWGLEIVKDKATKECFPPEYKVGSLANKIGCEHGVFVYP 414
Query: 515 G-----GRFNNVFRIKPPMCITKQDVDFGISIINDAIKKVV 622
G G + + PP IT++ +D + ++ I V
Sbjct: 415 GMGTIDGTRGDHVLLAPPYIITREQIDELVEALSKTITSTV 455
>SPCC777.09c |arg1||acetylornithine
aminotransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 441
Score = 89.0 bits (211), Expect = 6e-19
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 3/206 (1%)
Frame = +2
Query: 5 YLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFET--HGVKPDIVTMAKGIGNGFPLA 178
+L ++ K G + DE+Q G GR+GD W PDI+T+AK + NG P+
Sbjct: 245 FLIALRKACDKVGASLIYDEIQCGLGRSGD-LWAHSIVKDVASPDIITVAKPLANGLPIG 303
Query: 179 AVVTTKEIAANHAKAAYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEYFIRQLMD 358
A + + +IAA + +TFGGNP+A VG + + + QN + + + D
Sbjct: 304 ATIVSSKIAAEIHPGEHGSTFGGNPVACRVGTFCVNELGSSKILQNVRKQHKALTSRFDD 363
Query: 359 LQKQHP-VIGDVRGQGLMIGVELVEPGTKTPLTTSKVNDIHENIKDNGVLIARGGRFNNV 535
++P +I G+GL++G++ EP K E + G+L+ GG NN
Sbjct: 364 FVAKYPNLIRGYAGRGLLLGLQFTEPPAK----------FIELARQQGLLLLPGG--NNN 411
Query: 536 FRIKPPMCITKQDVDFGISIINDAIK 613
R+ P + + + + G+ I+ +K
Sbjct: 412 TRVLPSLNVKDEVIAKGLDIMESTLK 437
>SPAC19D5.07 |uga1||4-aminobutyrate aminotransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 474
Score = 69.7 bits (163), Expect = 4e-13
Identities = 43/136 (31%), Positives = 72/136 (52%), Gaps = 3/136 (2%)
Frame = +2
Query: 5 YLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVK--PDIVTMAKGIGNGFPLA 178
+ K Q +KK+ ++ DEVQTG G TG W E + PD+VT +K A
Sbjct: 284 FFHKLQATLKKHDVKFIVDEVQTGVGSTGT-LWAHEQWNLPYPPDMVTFSKKFQ-----A 337
Query: 179 AVVTTKEIAANHAKAAYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVVGEYFIRQLMD 358
A + ++A +FNT+ G+P + + +L+ I+++ L N K VG++ L +
Sbjct: 338 AGIFYHDLALRPHAYQHFNTWMGDPFRAVQSRYILQEIQDKDLLNNVKSVGDFLYAGLEE 397
Query: 359 LQKQHP-VIGDVRGQG 403
L ++HP I ++RG+G
Sbjct: 398 LARKHPGKINNLRGKG 413
>SPCC417.11c |||glutamate-1-semialdehyde
2,1-aminomutaseaminotransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 435
Score = 30.3 bits (65), Expect = 0.30
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +2
Query: 5 YLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKPDIVTMAKGIGNGFPLAA 181
+++ Q +KN +++ DEV T G + + +KPD+ T+ K +G G P A
Sbjct: 225 FMQTIQLECEKNDIVFILDEVMTSRLSPGGLQ---QIYCLKPDLTTLGKYLGGGLPFGA 280
>SPBC713.12 |erg1||squalene monooxygenase Erg1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 457
Score = 30.3 bits (65), Expect = 0.30
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = -1
Query: 558 HIGGFILNT--LLKRPPRAMSTPLSLIFSWISLTLEVVSGVLVPGSTSSTPIMRPCPLTS 385
H G F++N L P T ++ T EV++GV+ S +P+ PLT
Sbjct: 105 HYGRFVMNLRKALTSTPNVTVTEATVNELLRDETGEVITGVVTSSKKSESPVEYKAPLTI 164
Query: 384 PITGC 370
GC
Sbjct: 165 VCDGC 169
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 29.9 bits (64), Expect = 0.40
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -1
Query: 561 MHIGGFILNTLLKRPPRAMSTPLSLIFSWISLTLEVVSGVLVPGSTSSTPIMRP-CPLTS 385
MHI +LN LK PP ++S S I S S T V + PG + S P+ P P++
Sbjct: 195 MHIINLLLNGSLKSPPVSISP--SFIASAAS-TSSVSAPSQYPGLSRSPPVQAPNIPVSD 251
Query: 384 P 382
P
Sbjct: 252 P 252
>SPBC13G1.10c |mug81||ATP-dependent RNA helicase
Slh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1935
Score = 29.5 bits (63), Expect = 0.53
Identities = 23/106 (21%), Positives = 49/106 (46%), Gaps = 5/106 (4%)
Frame = -3
Query: 616 FFDRIIDDRNAEVDV-----LFSDAHWRFYSEYIIKASTTSDEHSVVFDILMDIINFGSG 452
F DR++D+ NAEV + + W Y+ I+ + + +D L++ GS
Sbjct: 699 FTDRLVDNLNAEVSLGTVTNIDEAVSWLGYTYLYIRMRRNPLVYGIAYDELVEDPLLGSK 758
Query: 451 QRCLSSGFNKLHSDHEALSPDIANHWVLLLKIHQLPDEVFADYLTV 314
+R L S +D++ + + N +++ + ++ + +Y TV
Sbjct: 759 RRELVSVAAGRLADNQMIVYNKKNGYLIPKDLGRIASNYYINYQTV 804
>SPBC15C4.02 |||ABC1 kinase family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 594
Score = 29.5 bits (63), Expect = 0.53
Identities = 30/113 (26%), Positives = 46/113 (40%), Gaps = 12/113 (10%)
Frame = -3
Query: 508 DEHSVVFDIL-MDIIN------FGSGQR--CLSSGFNKLHSDHEALSPDIANHWVLLLK- 359
DEHS+ D++ +DI + FG G C G N L S N+ ++LL
Sbjct: 347 DEHSISRDLVSVDICHIFNEMIFGKGGHLHCDPHGGNVLIRSKPKNSKSPRNYEIVLLDH 406
Query: 358 --IHQLPDEVFADYLTVLLQSFFFNNLQYSFSNSRSHRVSTESVKVGSLRVIG 206
+P E+ DY + L FN F + VS E+ + + + G
Sbjct: 407 GLYRDIPHELQVDYANMWLNIINFNEKNLKFYAKKVANVSDENFPIFATAITG 459
>SPBC4C3.05c |nuc1|rpa1|DNA-directed RNA polymerase I complex large
subunit Nuc1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1689
Score = 29.1 bits (62), Expect = 0.70
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = -3
Query: 520 STTSDEHSVVFD---ILMDIINFGSGQRCLSSGFNKLHSDHEALSPDIANHWVLLL 362
S S+E SV+FD +L I++ S +S F +HS HE PDIA + +L
Sbjct: 776 SPDSEEGSVLFDDGELLCGILDKSSFG---ASAFGLVHSVHELYGPDIAGRLLSVL 828
>SPBPB8B6.06c ||SPAPB8B6.06c, SPAPB8B6.06c|conserved fungal
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 27.1 bits (57), Expect = 2.8
Identities = 19/70 (27%), Positives = 29/70 (41%)
Frame = +3
Query: 465 LMISMRISKTTECSSLVVDALIMYSE*NLQCASLNRTSTSAFRSSMMRSKKLSTKCVIEI 644
L I I + T C+ V +MY N CA L+ ST + M K+ C+I +
Sbjct: 230 LSIMYMIPQITHCTP--VSRSVMYGIQNGFCAVLSTLSTFSNELHTMPIKRAYIYCIISV 287
Query: 645 LARLKVFIFV 674
+ + V
Sbjct: 288 AISFSICVIV 297
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 27.1 bits (57), Expect = 2.8
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = +2
Query: 164 GFPLAAV-VTTKEIAA---NHAKAAYFNTFGGNPMASTVGKAVLEVIEEE 301
GFP+ V T+ I + N A+ A + G P+ S++GKA+LE+ EE
Sbjct: 436 GFPVGFVNAVTRHIPSPRENAARKASQSYIG--PINSSIGKAILEMSREE 483
>SPAC977.11 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 311
Score = 27.1 bits (57), Expect = 2.8
Identities = 19/70 (27%), Positives = 29/70 (41%)
Frame = +3
Query: 465 LMISMRISKTTECSSLVVDALIMYSE*NLQCASLNRTSTSAFRSSMMRSKKLSTKCVIEI 644
L I I + T C+ V +MY N CA L+ ST + M K+ C+I +
Sbjct: 230 LSIMYMIPQITHCTP--VSRSVMYGIQNGFCAVLSTLSTFSNELHTMPIKRAYIYCIISV 287
Query: 645 LARLKVFIFV 674
+ + V
Sbjct: 288 AISFSICVIV 297
>SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 559
Score = 26.6 bits (56), Expect = 3.7
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 704 YSNNLKQCILYKNKNFQTGKDFYYTL 627
Y NL Q ++ K F +GK+ Y+TL
Sbjct: 352 YGVNLNQSVILKAIGFSSGKNEYHTL 377
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 26.2 bits (55), Expect = 4.9
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = -3
Query: 520 STTSDEHSVVFDILMDIINFGSGQRCLSSGFNKLHSDHEALSPDIANHWVLLLKIHQL 347
S T+ +HS + + N G++ +SS + SD PD H L+ K +QL
Sbjct: 121 SVTAHDHSDTSPLPITSSNQKEGKKNVSSIDVSMVSDSSEFKPDSLQHEKLVKKCNQL 178
>SPBC336.01 |fbh1|fdh1, fdh|DNA helicase I|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 878
Score = 26.2 bits (55), Expect = 4.9
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = -3
Query: 580 VDVLFSDAHWRFYSEYIIKASTTSDEHSVVFDILMDII 467
V +LF D W F++ + +ST++ E + D + ++
Sbjct: 195 VGILFEDDLWYFFNTLYMLSSTSAIEFAYFLDSIFTVV 232
>SPCC126.01c ||SPCC576.18c|conserved fungal
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 369
Score = 26.2 bits (55), Expect = 4.9
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Frame = -1
Query: 447 GVLVPGSTSSTPIM-----RPCPLTSPITGCCF*RSINCLMKYSPTTLLFCCSPSSSI 289
G+L+ GST ++ I+ +P L +TG R I C+ + T + + C SSI
Sbjct: 145 GLLLSGSTDASLIVWDVSSQPSRLLYKLTGHS--RGIECITRQPNTDIFWTCGSESSI 200
>SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1610
Score = 25.4 bits (53), Expect = 8.6
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 4/28 (14%)
Frame = -2
Query: 713 FPKYSNNLK---QCILY-KNKNFQTGKD 642
F S NL Q +LY KN+NFQTG +
Sbjct: 493 FDSLSRNLSLTVQTVLYLKNRNFQTGNE 520
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,010,172
Number of Sequences: 5004
Number of extensions: 63812
Number of successful extensions: 226
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 211
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 351258950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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