Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt7f16
(627 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 46 3e-06
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 45 8e-06
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 42 7e-05
SPBC9B6.09c |mdl1||mitochondrial peptide-transporting ATPase|Sch... 42 1e-04
SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|ch... 41 1e-04
SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces po... 36 0.004
SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit Caf16|Schizos... 35 0.011
SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|... 32 0.059
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 32 0.059
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 32 0.078
SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family |Schizosa... 32 0.078
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 31 0.18
SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces po... 31 0.18
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 30 0.24
SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch... 30 0.24
SPAPB2B4.04c ||pmc1, pmc1|P-type ATPase, calcium transporting Pm... 30 0.24
SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe... 29 0.42
SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces po... 29 0.55
SPAC2G11.11c |prh1||ATP-dependent RNA helicase Prh1|Schizosaccha... 29 0.73
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 28 0.96
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 28 0.96
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 28 1.3
SPCC794.10 |||UTP-glucose-1-phosphate uridylyltransferase |Schiz... 28 1.3
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 28 1.3
SPAC222.05c |mss1||COX RNA-associated protein|Schizosaccharomyce... 28 1.3
SPBC31E1.01c |atg2|mug36, SPBC660.18c|autophagy associated prote... 27 1.7
SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces p... 27 1.7
SPAC343.15 |||tRNA isopentenyltransferase|Schizosaccharomyces po... 27 2.2
SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr... 27 2.2
SPBP35G2.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr... 27 2.2
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 27 2.2
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 27 2.2
SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pomb... 27 2.2
SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase Prp16|... 27 2.9
SPAC56F8.06c |alg10||dolichyl-phosphate-glucose-glycolipid alpha... 27 2.9
SPCC162.11c |||uridine kinase |Schizosaccharomyces pombe|chr 3||... 26 3.9
SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces pom... 26 3.9
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 26 3.9
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 26 5.1
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 26 5.1
SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1 |Sc... 25 6.8
SPBC3E7.10 |fma1||methionine aminopeptidase Fma1 |Schizosaccharo... 25 6.8
SPAC144.06 |apl5||AP-3 adaptor complex subunit Apl5 |Schizosacch... 25 6.8
SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr 1|... 25 9.0
SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyc... 25 9.0
SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyce... 25 9.0
SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr 1|||Ma... 25 9.0
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 46.4 bits (105), Expect = 3e-06
Identities = 23/83 (27%), Positives = 44/83 (53%)
Frame = +3
Query: 174 KPKTVIIDNVSACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLT 353
+P+ +++DN S G+ A++G SG+GK+T ++ L + P G V ++G+++R L
Sbjct: 432 RPEVLVLDNFSLVCPSGKITALVGASGSGKST-IIGLVERFYDPIGGQVFLDGKDLRTLN 490
Query: 354 GAEIVPQFDVFTDSLTVMEQLVF 422
A + Q + + VF
Sbjct: 491 VASLRNQISLVQQEPVLFATTVF 513
Score = 35.1 bits (77), Expect = 0.008
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = +3
Query: 189 IIDNVSACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRD 347
++ ++ ++ G+F A +G SG GK+T + L + G V ++G NVRD
Sbjct: 1136 VLRGLNLTVKPGQFVAFVGSSGCGKST-TIGLIERFYDCDNGAVLVDGVNVRD 1187
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transporter
Bfr1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1530
Score = 45.2 bits (102), Expect = 8e-06
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 9/155 (5%)
Frame = +3
Query: 189 IIDNVSACIREGEFAAIIGPSGAGKTTFLVSLAGKC-TLPFEGTVTINGRNVRDL--TGA 359
+++ V + G+ A++G SGAGKTT L LA + T G + +NGR +
Sbjct: 900 LLNGVQGFVVPGKLTALMGESGAGKTTLLNVLAQRVDTGVVTGDMLVNGRGLDSTFQRRT 959
Query: 360 EIVPQFDVFTDSLTVMEQLVFMTEMKLGNSTKQPNK-SILNTVIEEFKLSAHVE----TX 524
V Q DV TV E L F ++ S K + +VI+ ++ ++ E T
Sbjct: 960 GYVQQQDVHIGESTVREALRFSAALRQPASVPLSEKYEYVESVIKLLEMESYAEAIIGTP 1019
Query: 525 XXXXXXXXXXXXXXATSFLSNPQILI-CDEPTTGL 626
+ P +L+ DEPT+GL
Sbjct: 1020 GSGLNVEQRKRATIGVELAAKPALLLFLDEPTSGL 1054
Score = 28.7 bits (61), Expect = 0.73
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Frame = +3
Query: 189 IIDNVSACIREGEFAAIIGPSGAGKTTFLVSLAGKCT--LPFEGTVTINGRNVRDLT--- 353
I+ + A GE ++G G+G +TFL S+ EGT +G + D+
Sbjct: 176 ILSHCHALANAGELVMVLGQPGSGCSTFLRSVTSDTVHYKRVEGTTHYDGIDKADMKKFF 235
Query: 354 GAEIV--PQFDVFTDSLTVMEQLVFMTEMKLGNS 449
+++ + DV SLT E L F + + N+
Sbjct: 236 PGDLLYSGENDVHFPSLTTAETLDFAAKCRTPNN 269
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 41.9 bits (94), Expect = 7e-05
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 11/154 (7%)
Frame = +3
Query: 198 NVSACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDL----TGAEI 365
NVS I GE IIGPSG+GK+TF +SL + P G + ++ + ++ G+ I
Sbjct: 454 NVSVFIPFGELVHIIGPSGSGKSTF-ISLLLRYFSPTYGNIYLDDFPLEEIDEHVLGSTI 512
Query: 366 --VPQFDVFTDSLTVMEQLVFMTEMKLGNSTKQPNKSILN-TVIEEFKL----SAHVETX 524
V Q V D +T+ E ++ E N+++ + + +++EF L S
Sbjct: 513 TLVCQQPVIFD-MTIRENIIMRNE----NASESDFEEVCRLALVDEFALTFDQSYDTPCK 567
Query: 525 XXXXXXXXXXXXXXATSFLSNPQILICDEPTTGL 626
A + L + +ILI DEPT+ L
Sbjct: 568 EASLSGGQQQRIALARALLRDTEILILDEPTSAL 601
Score = 39.5 bits (88), Expect = 4e-04
Identities = 44/153 (28%), Positives = 69/153 (45%), Gaps = 8/153 (5%)
Frame = +3
Query: 192 IDNVSACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRD------LT 353
++NVS I E AI+G SG+GK+T LV L K T P E + I+G + + L
Sbjct: 1118 LNNVSLSIEAREKVAIVGISGSGKST-LVELLRK-TYPSE-DIYIDGYPLTNIDTNWLLK 1174
Query: 354 GAEIVPQFDVFTDSLTVMEQLVFMTEMKLGNSTKQPNKSILNTVIEEFK--LSAHVETXX 527
IV Q S T++E L++ + + + +K+ + VI+ L +
Sbjct: 1175 KVAIVDQKPHLLGS-TILESLLYGVDRDINSVMDALDKTYMTEVIQNLPNGLDTPLLEFS 1233
Query: 528 XXXXXXXXXXXXXATSFLSNPQILICDEPTTGL 626
A + L NP++LI DE T+ L
Sbjct: 1234 KNFSGGQIQRLAFARALLRNPRLLILDECTSAL 1266
>SPBC9B6.09c |mdl1||mitochondrial peptide-transporting
ATPase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 726
Score = 41.5 bits (93), Expect = 1e-04
Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 9/160 (5%)
Frame = +3
Query: 174 KPKTVIIDNVSACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLT 353
+P I DN+S I G AI+ PSG GK+T + L + P G + +G ++
Sbjct: 494 RPSASIFDNLSFDIHPGTNVAIVAPSGGGKST-ISQLLLRFYAPSSGKILADGVDISTYN 552
Query: 354 GAEIVPQFDVFTD-----SLTVMEQLVF----MTEMKLGNSTKQPNKSILNTVIEEFKLS 506
+ F + S T+ E + + ++ ++ ++ K+ N S + + E K S
Sbjct: 553 VHQWRSHFGLVGQEPVLFSGTIGENIAYGKSNASQEEIEDAAKRANCSFVLSFPE--KWS 610
Query: 507 AHVETXXXXXXXXXXXXXXXATSFLSNPQILICDEPTTGL 626
V T A + L NP LI DE T+ L
Sbjct: 611 TQVGTRGLQLSGGQKQRIAIARALLRNPAFLILDEATSAL 650
>SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 487
Score = 41.1 bits (92), Expect = 1e-04
Identities = 35/159 (22%), Positives = 69/159 (43%), Gaps = 13/159 (8%)
Frame = +3
Query: 189 IIDNVSACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIV 368
++ +++ IREGE A+ G +G+GKTT L + G F + G+++ TG I
Sbjct: 279 VLSDINWTIREGERWALTGSNGSGKTTLLAYVVGDHPKLFASNIKFFGKSIGPGTGISIF 338
Query: 369 ----------PQF-DVFTDSLTVMEQLV--FMTEMKLGNSTKQPNKSILNTVIEEFKLSA 509
P+ + F T E L+ + T + T + + +++++EEF+L
Sbjct: 339 DIQENIGHCSPEIHNHFPKQHTCFEALLSAWSTTFTIPKLT-ETRLAAISSILEEFELKD 397
Query: 510 HVETXXXXXXXXXXXXXXXATSFLSNPQILICDEPTTGL 626
+ + + P++++ DEP G+
Sbjct: 398 IKDKPLSSISVGMQRFILFCRAIVKQPRLVVLDEPFQGV 436
Score = 29.1 bits (62), Expect = 0.55
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 189 IIDNVSACIREGEFAAIIGPSGAGKTTFLVSLAGKCT 299
+ NVS + + AIIG +G+G+TTFL + G T
Sbjct: 19 LFKNVSFELARKQNWAIIGNTGSGRTTFLRCIQGSFT 55
>SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1057
Score = 36.3 bits (80), Expect = 0.004
Identities = 21/50 (42%), Positives = 31/50 (62%)
Frame = +3
Query: 171 AKPKTVIIDNVSACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTV 320
AK K+ +DNV+ + AI+GP+GAGK+T + L G+ +P EG V
Sbjct: 704 AKKKS--LDNVTVGLSLSSRVAILGPNGAGKSTLIKVLIGE-VIPQEGKV 750
Score = 25.0 bits (52), Expect = 9.0
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 567 ATSFLSNPQILICDEPTTGL 626
A +NPQ+L+ DEPT L
Sbjct: 922 AACLWNNPQLLVLDEPTNFL 941
>SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit
Caf16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 280
Score = 34.7 bits (76), Expect = 0.011
Identities = 16/49 (32%), Positives = 32/49 (65%)
Frame = +3
Query: 192 IDNVSACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRN 338
+D+V+ + +G ++G +GAGK+T L L+GK +L G +++ G++
Sbjct: 20 LDHVTLDLPKGSRTLLVGANGAGKSTLLKLLSGK-SLAKAGHISVGGKD 67
>SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase
Abc4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1469
Score = 32.3 bits (70), Expect = 0.059
Identities = 17/54 (31%), Positives = 31/54 (57%)
Frame = +3
Query: 189 IIDNVSACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDL 350
I+ +V+ I E A++G +G+GK+T ++L + T G + INGR + +
Sbjct: 1228 ILKDVNLHINPSEKVAVVGRTGSGKSTLGLTLL-RFTHRISGEIYINGRETQSV 1280
Score = 29.1 bits (62), Expect = 0.55
Identities = 11/48 (22%), Positives = 26/48 (54%)
Frame = +3
Query: 159 WRKVAKPKTVIIDNVSACIREGEFAAIIGPSGAGKTTFLVSLAGKCTL 302
W P + +++ + + +IGP+G+GK++ + +L G+ +L
Sbjct: 620 WVSNPSPGDFCLRDLNIVFPRNKLSIVIGPTGSGKSSLISALLGELSL 667
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 32.3 bits (70), Expect = 0.059
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Frame = -3
Query: 412 CSITVKLSVNTSNWGTISAPVRSLTFLPLIVTVPSN---GNVHFPANDTRNVVFPAPLGP 242
CS+ V +NT N ++SA L FLP + +N ++ FP D R FP P
Sbjct: 68 CSLDVNNQINTINITSVSAGTNEL-FLPTLSHAHANDREASLFFPYTDIRYNGFPEPSN- 125
Query: 241 MIAANSPSLIHAETLSII 188
+S S++ T+ +I
Sbjct: 126 ---TDSTSILSFNTIRLI 140
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 31.9 bits (69), Expect = 0.078
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = -3
Query: 442 PSFISVIKTSCSITVKLSVNTSNWGTISAPVRSLTFLPLIVTVPSNGNVHFPANDTRNVV 263
PS I+++ TS V T+NW + S+ S + P+ + S+G + +N + N V
Sbjct: 182 PSIITLVSTSYVSEVVTPTTTNNWNSSSSFTSSTSSTPISSSYSSSGTLPSKSNKSSNHV 241
>SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 618
Score = 31.9 bits (69), Expect = 0.078
Identities = 12/36 (33%), Positives = 25/36 (69%)
Frame = +3
Query: 186 VIIDNVSACIREGEFAAIIGPSGAGKTTFLVSLAGK 293
++I+N + + G+ ++G +G+GK+TFL S+A +
Sbjct: 89 LLIENATIELNHGQRYGLLGDNGSGKSTFLESVAAR 124
Score = 29.5 bits (63), Expect = 0.42
Identities = 36/136 (26%), Positives = 54/136 (39%), Gaps = 5/136 (3%)
Frame = +3
Query: 234 AIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQFDVFTDSL----T 401
AI+G +G GK+T L + G +P EG NV +G ++ D L +
Sbjct: 420 AIVGKNGTGKSTLLNLITG-LLIPIEG-------NVSRYSGLKMAKYSQHSADQLPYDKS 471
Query: 402 VMEQLVFMTEMKLGNSTKQPNKSILNTVIEEFKLSA-HVETXXXXXXXXXXXXXXXATSF 578
+E ++ + K Q +S+L +F LS H + A
Sbjct: 472 PLEYIMDTYKPKFPERELQQWRSVLG----KFGLSGLHQTSEIRTLSDGLKSRVVFAALA 527
Query: 579 LSNPQILICDEPTTGL 626
L P IL+ DEPT L
Sbjct: 528 LEQPHILLLDEPTNHL 543
>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1427
Score = 30.7 bits (66), Expect = 0.18
Identities = 15/57 (26%), Positives = 34/57 (59%)
Frame = +3
Query: 180 KTVIIDNVSACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDL 350
+ ++++++ I E AI+G +G+GK+T ++L + T+ G V ++G ++ L
Sbjct: 1193 QAAVLEDINLEILPKEKIAIVGRTGSGKSTMGLTLL-RFTMIMSGAVEVDGIDINSL 1248
Score = 29.9 bits (64), Expect = 0.31
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = +3
Query: 72 NKVLLDEFENKDAIIVRNLKV-WTPEEKSIWRKVAKPKTVI--IDNVSACIREGEFAAII 242
N V E+ D+ + N + W+P P T + + N++ I +F ++
Sbjct: 564 NMVNDSSIESSDSFVFENTSLSWSPT----------PSTALFQLKNLNFTIPRNQFTLVV 613
Query: 243 GPSGAGKTTFLVSLAGK 293
G +G+GK+T ++L G+
Sbjct: 614 GSTGSGKSTLAMALLGE 630
>SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1396
Score = 30.7 bits (66), Expect = 0.18
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Frame = +3
Query: 180 KTVIIDNVSACIREGEFAAIIGPSGAGKTTFLVSLAGK-CTLPFEGTVTING----RNVR 344
K I+ NVS +++ A++G + +GK+ L L+ + EG +T++G +N+R
Sbjct: 773 KKQILTNVSGYLKKNTLTALLGENKSGKSVLLRILSQRGIAGSVEGEITLSGLKNPKNLR 832
Query: 345 DLTGAEIVPQFDVFTDSLTVMEQL 416
G V + +F TV E L
Sbjct: 833 KRIG--YVRKNPLFISEYTVRETL 854
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 30.3 bits (65), Expect = 0.24
Identities = 14/55 (25%), Positives = 32/55 (58%)
Frame = +3
Query: 186 VIIDNVSACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDL 350
++++++S I+ E I+G +GAGK+T ++L + P G + ++ N+ +
Sbjct: 1239 LVLNDISVNIKPQEKIGIVGRTGAGKSTLTLALF-RLIEPTSGDIQLDDINITSI 1292
Score = 25.4 bits (53), Expect = 6.8
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 162 RKVAKPKTVIIDNVSACIREGEFAAIIGPSGAGKTTFLVSLAG 290
+ A+P ID V+ R GE I+G G GK++ L + G
Sbjct: 592 QNAAEPTLRDIDFVA---RRGELCCIVGKVGMGKSSLLEACLG 631
>SPCC417.08 |tef3||translation elongation factor
eEF3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1047
Score = 30.3 bits (65), Expect = 0.24
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +3
Query: 192 IDNVSACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTV 320
++++S + A+IGP+GAGK+T + L G+ LP G +
Sbjct: 690 LNDISFQVSLSSRIAVIGPNGAGKSTLIKVLTGE-LLPTVGEI 731
>SPAPB2B4.04c ||pmc1, pmc1|P-type ATPase, calcium transporting Pmc1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1292
Score = 30.3 bits (65), Expect = 0.24
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = +3
Query: 279 SLAGKCTLPFEGTVTINGRNVRDLTGA---EIVPQFDVFTDSLTVMEQLVFMTEMKLGN 446
++A +C + E +++ G R L+ EI+P+ DV S + +QL+ KLGN
Sbjct: 816 AIASQCGIYTEDGISMEGPEFRSLSDEKRLEILPKLDVLARSSPLDKQLLIEGLQKLGN 874
>SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1465
Score = 29.5 bits (63), Expect = 0.42
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +3
Query: 192 IDNVSACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNV 341
++N++ I E I+G +GAGK+T ++L + P EG + I+ ++
Sbjct: 1243 LNNINIEISPREKIGIVGRTGAGKSTLAMALF-RIIEPTEGKIEIDNEDI 1291
>SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 449
Score = 29.1 bits (62), Expect = 0.55
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +3
Query: 237 IIGPSGAGKTTFLVSLAGK 293
+ GP G+GKT+FL +LAG+
Sbjct: 247 LYGPPGSGKTSFLYALAGE 265
>SPAC2G11.11c |prh1||ATP-dependent RNA helicase
Prh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 719
Score = 28.7 bits (61), Expect = 0.73
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +3
Query: 195 DNVSACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTI 326
D + I++ ++G +G+GK+T + +C EG V I
Sbjct: 103 DTLCQQIQDNRVIVVVGETGSGKSTQIPQFLNECPYAQEGCVAI 146
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 28.3 bits (60), Expect = 0.96
Identities = 27/102 (26%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Frame = +3
Query: 225 EFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQFD--VFTDSL 398
+F +IIGP+GAGK+ + +++ L + + + NV++L + Q D FTDS
Sbjct: 26 DFTSIIGPNGAGKSNLMDAIS--FVLGVKSS-HLRSTNVKELIYRGKILQRDNTDFTDSS 82
Query: 399 TVMEQLV-FMTEMKLGNSTKQPNKSILNTVIEEFKLSAHVET 521
V M E+ G ++ ++I + E+K+ + T
Sbjct: 83 NPTTAYVKLMYELDNGEQ-REYKRAITPSGATEYKIDEEIVT 123
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 28.3 bits (60), Expect = 0.96
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +3
Query: 234 AIIGPSGAGKTTFLVSLAGKCTLPFEGTV 320
A++GP+GAGKTT L+ L + P G+V
Sbjct: 624 ALVGPNGAGKTT-LIKLILEKVQPSTGSV 651
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 27.9 bits (59), Expect = 1.3
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +3
Query: 189 IIDNVSACIREGEFAAIIGPSGAGKTTFLVSLAG 290
+++ ++A ++ E ++G +G GKTT + LAG
Sbjct: 456 LLEQLAAGVQTNEPLLLVGETGTGKTTTIQLLAG 489
Score = 25.0 bits (52), Expect = 9.0
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +3
Query: 141 PEEKSIWRKVAKPKTVIIDNVSACIREGEFAAIIGPSGAGKTTFLVSLA 287
P K +W +P + V C+ E ++G +G GKTT LA
Sbjct: 1162 PLSKVVW---TRPMIRLFCLVWRCLLAKEPVLLVGDTGCGKTTVCQILA 1207
>SPCC794.10 |||UTP-glucose-1-phosphate uridylyltransferase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 499
Score = 27.9 bits (59), Expect = 1.3
Identities = 19/73 (26%), Positives = 35/73 (47%)
Frame = -3
Query: 538 DNDPMRVSTCALSLNSSMTVFRIDLFGCFVLLPSFISVIKTSCSITVKLSVNTSNWGTIS 359
+N+P R+ ++ S+++ F+ G V P FISV +S V+ + + G++
Sbjct: 350 NNEPARIIEFTTAIGSAISQFK-KTEGIRVSRPRFISVKNSSDLFLVRCDLYNVDHGSLK 408
Query: 358 APVRSLTFLPLIV 320
L F P +V
Sbjct: 409 IEESRLGFPPPVV 421
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 27.9 bits (59), Expect = 1.3
Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Frame = +3
Query: 234 AIIGPSGAGKTTFLVSLA---GKCTL-PFEGTVTINGRNVRDLTGAEIVPQFDVFTDSLT 401
A++GP G GK+T + SL K T+ G +T+ R +T E D
Sbjct: 78 AVMGPPGTGKSTLIKSLVRRYSKYTISQITGPITVVAGKKRRITFLECPNDLSSMIDVAK 137
Query: 402 VMEQLVFMTEMKLG 443
+ + ++ + + G
Sbjct: 138 IADLVLLLIDANFG 151
>SPAC222.05c |mss1||COX RNA-associated protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 27.9 bits (59), Expect = 1.3
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 213 IREGEFAAIIGPSGAGKTTFLVSLAGK 293
+R+G AI+GPS AGK++ + LA +
Sbjct: 236 LRKGINVAILGPSNAGKSSLINLLANR 262
>SPBC31E1.01c |atg2|mug36, SPBC660.18c|autophagy associated protein
Mug36|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1646
Score = 27.5 bits (58), Expect = 1.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -3
Query: 520 VSTCALSLNSSMTVFRIDLFGCFVLLPS 437
V +C L++NS + F + L+G F+ PS
Sbjct: 338 VPSCVLNINSQVIAFLLYLYGYFLPAPS 365
>SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 773
Score = 27.5 bits (58), Expect = 1.7
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 231 AAIIGPSGAGKTTFLVSLAGKCTLPF 308
A + GP G GKT + AG+ +PF
Sbjct: 332 AILSGPPGTGKTLLAKATAGEANVPF 357
>SPAC343.15 |||tRNA isopentenyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 434
Score = 27.1 bits (57), Expect = 2.2
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +3
Query: 237 IIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQFDVFTDSLTVMEQ 413
+IG +GAGK+ V LA + G+ IN +++ G FD T+ +TV EQ
Sbjct: 8 VIGTTGAGKSDLAVQLAKRF-----GSQVINADSMQIYRG------FDTITNKITVEEQ 55
>SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 593
Score = 27.1 bits (57), Expect = 2.2
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 216 REGEFAAIIGPSGAGKTTFLVSLAGK 293
R G+ ++G +G GK+T L L+GK
Sbjct: 101 RPGQVLGLVGTNGIGKSTALKILSGK 126
>SPBP35G2.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1060
Score = 27.1 bits (57), Expect = 2.2
Identities = 31/93 (33%), Positives = 40/93 (43%), Gaps = 2/93 (2%)
Frame = -3
Query: 610 SSHINICGFDKNEVAKDNNLLSPPDNDPMRVSTCALSLNSSMTVFRIDLFGCFVLLPSFI 431
S+ NI ++E+ NNLL ND ST LS+ + F P+ I
Sbjct: 62 SNRSNISSSLRSEMEMSNNLLKNTQNDTW-TSTVGLSVPENQEAMN------FNEGPTGI 114
Query: 430 SVI--KTSCSITVKLSVNTSNWGTISAPVRSLT 338
S I K + SIT KL N SN S+ R T
Sbjct: 115 SSIASKNNSSITSKLQ-NNSNLSVTSSANRGRT 146
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 27.1 bits (57), Expect = 2.2
Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +3
Query: 243 GPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQF-DVFTDSLTVMEQLV 419
GP G GKT ++A +C+ F +++ G + + E D+F + +V
Sbjct: 538 GPPGTGKTLLAKAIANECSANF---ISVKGPELLSMWFGESESNVRDIFDKARAAAPCVV 594
Query: 420 FMTEM 434
F+ E+
Sbjct: 595 FLDEL 599
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 27.1 bits (57), Expect = 2.2
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 237 IIGPSGAGKTTFLVSLAGKCTLPF 308
+ GP G GKT ++AG+ +PF
Sbjct: 305 LTGPPGTGKTMLARAVAGEANVPF 328
>SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 779
Score = 27.1 bits (57), Expect = 2.2
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +3
Query: 243 GPSGAGKTTFLVSLAGKCTLPFEGTVTINGRN-VRDLTGAEIVPQFDVFTDSLTVMEQLV 419
GP G GKT +LA + +PF ++I+ + V ++G +VF ++ ++ L+
Sbjct: 215 GPPGCGKTMLANALANELGVPF---ISISAPSIVSGMSGESEKKVREVFEEAKSLAPCLM 271
Query: 420 FMTEM 434
F+ E+
Sbjct: 272 FIDEI 276
>SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase
Prp16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1173
Score = 26.6 bits (56), Expect = 2.9
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +3
Query: 177 PKTVIIDNVSACIREGEFAAIIGPSGAGKTTFL 275
P + + + + IR+ + ++G +G+GKTT L
Sbjct: 493 PAFAVREQLLSVIRDNQVLIVVGETGSGKTTQL 525
>SPAC56F8.06c |alg10||dolichyl-phosphate-glucose-glycolipid
alpha-glucosyltransferase Alg10|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 445
Score = 26.6 bits (56), Expect = 2.9
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -1
Query: 294 ISRLTTLEMLFFLLHSAR*LLQIPLPLYTLKHYRL 190
IS+L + FFLL S L +P PL +++ L
Sbjct: 357 ISKLQMTSLTFFLLISTTILTLVPAPLVEFRYFLL 391
>SPCC162.11c |||uridine kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 454
Score = 26.2 bits (55), Expect = 3.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 216 REGEFAAIIGPSGAGKTTFLVSLAGKCTLP 305
R+ F I GPSG+GKT+ + LP
Sbjct: 19 RKVRFIGIAGPSGSGKTSVAQLIVKALNLP 48
>SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 26.2 bits (55), Expect = 3.9
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 177 PKTVIIDNVSACIREGEFAAIIGPSGAGKTTFL 275
P I+ +V ++ ++GP+GAGK+T L
Sbjct: 529 PGHPILKHVDIDVQMDSRIGVVGPNGAGKSTML 561
Score = 25.4 bits (53), Expect = 6.8
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 579 LSNPQILICDEPTTGL 626
L NP ILI DEPT L
Sbjct: 652 LQNPHILILDEPTNHL 667
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 26.2 bits (55), Expect = 3.9
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 234 AIIGPSGAGKTTFLVSLAGK 293
A++GP+G GKT + LA +
Sbjct: 136 ALVGPAGVGKTAIMEGLASR 155
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 25.8 bits (54), Expect = 5.1
Identities = 18/70 (25%), Positives = 30/70 (42%)
Frame = -3
Query: 463 FGCFVLLPSFISVIKTSCSITVKLSVNTSNWGTISAPVRSLTFLPLIVTVPSNGNVHFPA 284
F F +L F+++ + +T ++GT+ T+ V V NG V A
Sbjct: 4 FQLFSILSYFVALFLLPMAFASGDDNSTESYGTVIGIDLGTTYS--CVAVMKNGRVEIIA 61
Query: 283 NDTRNVVFPA 254
ND N + P+
Sbjct: 62 NDQGNRITPS 71
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 25.8 bits (54), Expect = 5.1
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -3
Query: 331 PLIVTVPSNGNVHFPANDTRNVVFPAPLGPMIAANS 224
P + PSNG V P N + P + P I + S
Sbjct: 253 PPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTS 288
>SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1573
Score = 25.4 bits (53), Expect = 6.8
Identities = 16/58 (27%), Positives = 24/58 (41%)
Frame = +3
Query: 135 WTPEEKSIWRKVAKPKTVIIDNVSACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPF 308
W +S K+ +V D + I + +IG GAGKTT +A + F
Sbjct: 834 WDVLHQSFGVKLTGATSVASDPLKGSISKNASIILIGMRGAGKTTIGKIIAKQLNFKF 891
>SPBC3E7.10 |fma1||methionine aminopeptidase Fma1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 379
Score = 25.4 bits (53), Expect = 6.8
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 126 LKVWTPEEKSIWRKVAKPKTVIIDNVSACIREG 224
LK TP+E+ RKV + ++D +A +R G
Sbjct: 117 LKRLTPKEQEGMRKVCRLGREVLDAAAAAVRPG 149
>SPAC144.06 |apl5||AP-3 adaptor complex subunit Apl5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 834
Score = 25.4 bits (53), Expect = 6.8
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -3
Query: 478 FRIDLFGCFVLLPSFISVIKTSCSITVK 395
F +D+F +L PS++S T CS++ K
Sbjct: 445 FSVDIFSQAILDPSYVST--TDCSVSEK 470
>SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1402
Score = 25.0 bits (52), Expect = 9.0
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -3
Query: 550 LSPPDNDPMRVSTCALSLNSSM 485
L+ P +P+R+ T +L+L SSM
Sbjct: 1336 LATPKKEPLRLDTNSLTLTSSM 1357
>SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 735
Score = 25.0 bits (52), Expect = 9.0
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +3
Query: 324 INGRNVRDLTGAEIVPQFDVFTDSLTVMEQLVFMTEMKLG-NSTKQPNKSILNTVIEEFK 500
IN +NV+ E+ Q TD+L V E+KL +K+ N+ + +E+ +
Sbjct: 534 INSKNVQQSRSEELEQQISKLTDNLQEYRNTV--RELKLDLEKSKKKNEDLSKLEVEKVE 591
Query: 501 LSAHVE 518
A+++
Sbjct: 592 EIANLK 597
>SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1067
Score = 25.0 bits (52), Expect = 9.0
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +3
Query: 219 EGEFAAIIGPSGAGKTTFLVSLAGKCTLPF 308
+G+ ++GP G GKT+ S+A F
Sbjct: 570 QGKIMCLVGPPGVGKTSVGKSIASALNREF 599
>SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 193
Score = 25.0 bits (52), Expect = 9.0
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +3
Query: 237 IIGPSGAGKTTFLVSLAGK 293
+IGP+G+GKTT +++ K
Sbjct: 19 VIGPAGSGKTTMAKAVSEK 37
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,626,640
Number of Sequences: 5004
Number of extensions: 55023
Number of successful extensions: 236
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 235
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 277683324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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