Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt7f16
(627 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29486-1|AAC46995.1| 695|Anopheles gambiae ATP-binding-cassette... 64 5e-12
U29485-1|AAC46994.1| 695|Anopheles gambiae ATP-binding-cassette... 64 5e-12
U29484-1|AAC47423.1| 673|Anopheles gambiae ATP-binding-cassette... 64 5e-12
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 33 0.006
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 25 1.5
M93689-1|AAA29368.1| 442|Anopheles gambiae protein ( Anopheles ... 25 2.0
AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking p... 24 4.5
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 23 6.0
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi... 23 6.0
EF426180-1|ABO26423.1| 133|Anopheles gambiae unknown protein. 23 7.9
AY578796-1|AAT07301.1| 437|Anopheles gambiae Gbb-60A protein. 23 7.9
AY146757-1|AAO12072.1| 246|Anopheles gambiae odorant-binding pr... 23 7.9
AJ618928-1|CAF02007.1| 285|Anopheles gambiae odorant-binding pr... 23 7.9
>U29486-1|AAC46995.1| 695|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 695
Score = 63.7 bits (148), Expect = 5e-12
Identities = 50/169 (29%), Positives = 76/169 (44%), Gaps = 14/169 (8%)
Frame = +3
Query: 162 RKVAKPKTVIIDNVSACIREGEFAAIIGPSGAGKTTFLVSLAGK----CTLPFEGTVTIN 329
RK P+ ++ NV+ + GE A++G SGAGKTT L +LA + + +N
Sbjct: 106 RKDFNPRKHLLKNVTGVAKSGELLAVMGSSGAGKTTLLNALAFRSPPGVKISPNAVRALN 165
Query: 330 G--RNVRDLTG-AEIVPQFDVFTDSLTVMEQLVFMTEMKLGNSTKQPNKS-ILNTVIEEF 497
G N L V Q D+F SLT E L+F +++G K + V++E
Sbjct: 166 GVPVNAEQLRARCAYVQQDDLFIPSLTTREHLLFQAMLRMGRDVPASVKQHRVQEVLQEL 225
Query: 498 KLSAHVET------XXXXXXXXXXXXXXXATSFLSNPQILICDEPTTGL 626
L +T A+ L++P +L+CDEPT+GL
Sbjct: 226 SLVKCADTIIGAPGRIKGLSGGERKRLAFASETLTDPHLLLCDEPTSGL 274
>U29485-1|AAC46994.1| 695|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 695
Score = 63.7 bits (148), Expect = 5e-12
Identities = 50/169 (29%), Positives = 76/169 (44%), Gaps = 14/169 (8%)
Frame = +3
Query: 162 RKVAKPKTVIIDNVSACIREGEFAAIIGPSGAGKTTFLVSLAGK----CTLPFEGTVTIN 329
RK P+ ++ NV+ + GE A++G SGAGKTT L +LA + + +N
Sbjct: 106 RKDFNPRKHLLKNVTGVAKSGELLAVMGSSGAGKTTLLNALAFRSPPGVKISPNAVRALN 165
Query: 330 G--RNVRDLTG-AEIVPQFDVFTDSLTVMEQLVFMTEMKLGNSTKQPNKS-ILNTVIEEF 497
G N L V Q D+F SLT E L+F +++G K + V++E
Sbjct: 166 GVPVNAEQLRARCAYVQQDDLFIPSLTTREHLLFQAMLRMGRDVPASVKQHRVQEVLQEL 225
Query: 498 KLSAHVET------XXXXXXXXXXXXXXXATSFLSNPQILICDEPTTGL 626
L +T A+ L++P +L+CDEPT+GL
Sbjct: 226 SLVKCADTIIGAPGRIKGLSGGERKRLAFASETLTDPHLLLCDEPTSGL 274
>U29484-1|AAC47423.1| 673|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 673
Score = 63.7 bits (148), Expect = 5e-12
Identities = 50/169 (29%), Positives = 76/169 (44%), Gaps = 14/169 (8%)
Frame = +3
Query: 162 RKVAKPKTVIIDNVSACIREGEFAAIIGPSGAGKTTFLVSLAGK----CTLPFEGTVTIN 329
RK P+ ++ NV+ + GE A++G SGAGKTT L +LA + + +N
Sbjct: 84 RKDFNPRKHLLKNVTGVAKSGELLAVMGSSGAGKTTLLNALAFRSPPGVKISPNAVRALN 143
Query: 330 G--RNVRDLTG-AEIVPQFDVFTDSLTVMEQLVFMTEMKLGNSTKQPNKS-ILNTVIEEF 497
G N L V Q D+F SLT E L+F +++G K + V++E
Sbjct: 144 GVPVNAEQLRARCAYVQQDDLFIPSLTTREHLLFQAMLRMGRDVPASVKQHRVQEVLQEL 203
Query: 498 KLSAHVET------XXXXXXXXXXXXXXXATSFLSNPQILICDEPTTGL 626
L +T A+ L++P +L+CDEPT+GL
Sbjct: 204 SLVKCADTIIGAPGRIKGLSGGERKRLAFASETLTDPHLLLCDEPTSGL 252
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 33.5 bits (73), Expect = 0.006
Identities = 23/96 (23%), Positives = 52/96 (54%)
Frame = +3
Query: 228 FAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQFDVFTDSLTVM 407
F+A+IGP+G+GK+ F+ +++ + E T ++ R + +L + + ++ +VM
Sbjct: 33 FSAVIGPNGSGKSNFMDAIS---FVMGEKTSSLRVRKLTELINGASIGR--PISNRASVM 87
Query: 408 EQLVFMTEMKLGNSTKQPNKSILNTVIEEFKLSAHV 515
+ + TE + G K +S++N E++++ V
Sbjct: 88 ARFIIKTEAE-GEVEKTFQRSVIN-ASSEYRINGSV 121
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 25.4 bits (53), Expect = 1.5
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = +3
Query: 228 FAAIIGPSGAGKTTFLVSL 284
F++IIGP+G+GK+ + S+
Sbjct: 96 FSSIIGPNGSGKSNVIDSM 114
>M93689-1|AAA29368.1| 442|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 442
Score = 25.0 bits (52), Expect = 2.0
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = -3
Query: 556 NLLSPPDNDPMRVSTCALSLNSSMTVFRIDLFGCFVLLPSFISVIKTSCSITVK-LSVNT 380
N+ S D MRV A+ ++ V+R+ G + L SFIS K S ++K L++ +
Sbjct: 260 NIKSHVSADDMRVWLKAVLPTDNIDVYRLTKKGANLDLMSFIS-FKVSIPKSLKDLALQS 318
Query: 379 SNWGTISAPVR 347
+ W +S VR
Sbjct: 319 TIW-PVSLTVR 328
>AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking
protein.
Length = 932
Score = 23.8 bits (49), Expect = 4.5
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 311 RHRYDQR*KCQGSDGCRDRAPVRRVHGQ 394
RH YD + C +DG DR+ +++ H Q
Sbjct: 714 RHAYDVQQNCDDADG--DRSNLQQQHVQ 739
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 23.4 bits (48), Expect = 6.0
Identities = 10/49 (20%), Positives = 25/49 (51%)
Frame = +3
Query: 99 NKDAIIVRNLKVWTPEEKSIWRKVAKPKTVIIDNVSACIREGEFAAIIG 245
N DA I +WTP+++ ++ + + +++D A + + + +G
Sbjct: 147 NLDATITCG--IWTPDDQQVYFGTTQGQIIVMDVHGAMVSQVPLGSDVG 193
>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
channel alpha subunitprotein.
Length = 2139
Score = 23.4 bits (48), Expect = 6.0
Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -3
Query: 193 IITVFGLATFLHIDFSSGV-QTFRFLTIIASL 101
I +FG++ F+H+ SG+ + F T S+
Sbjct: 1765 IFAIFGMSFFMHVKDKSGLDDVYNFKTFGQSM 1796
>EF426180-1|ABO26423.1| 133|Anopheles gambiae unknown protein.
Length = 133
Score = 23.0 bits (47), Expect = 7.9
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -2
Query: 290 PG*RH*KCCFSCSTRPDDCCKFPFP 216
PG R+ +C+T DCCK P
Sbjct: 55 PGARYLTLTHTCNTPWADCCKVDEP 79
>AY578796-1|AAT07301.1| 437|Anopheles gambiae Gbb-60A protein.
Length = 437
Score = 23.0 bits (47), Expect = 7.9
Identities = 12/55 (21%), Positives = 24/55 (43%)
Frame = -3
Query: 307 NGNVHFPANDTRNVVFPAPLGPMIAANSPSLIHAETLSIITVFGLATFLHIDFSS 143
+G +FP N N A + ++ N P+ + + + ++ HID S+
Sbjct: 366 SGECNFPLNAHMNATNHAIVQTLVHLNHPTKVPKPCCAPTKLIPISVLYHIDESN 420
>AY146757-1|AAO12072.1| 246|Anopheles gambiae odorant-binding
protein AgamOBP39 protein.
Length = 246
Score = 23.0 bits (47), Expect = 7.9
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -3
Query: 601 INICGFDKNEVAKDNNLLSPPDNDPMRVSTCA 506
+ G +N + + NN + P D D M + CA
Sbjct: 45 VKYLGICENRLHQYNNSVYPTDQDTMCMVRCA 76
>AJ618928-1|CAF02007.1| 285|Anopheles gambiae odorant-binding
protein OBPjj83a protein.
Length = 285
Score = 23.0 bits (47), Expect = 7.9
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -3
Query: 601 INICGFDKNEVAKDNNLLSPPDNDPMRVSTCA 506
+ G +N + + NN + P D D M + CA
Sbjct: 45 VKYLGICENRLHQYNNSVYPTDQDTMCMVRCA 76
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 652,173
Number of Sequences: 2352
Number of extensions: 13168
Number of successful extensions: 37
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61050630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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