Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt7f12
(487 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 44 2e-05
SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces ... 42 7e-05
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 42 7e-05
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 36 0.004
SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces pomb... 36 0.004
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 34 0.013
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 33 0.023
SPAC1A6.10 ||SPAC30D11.15c|Moeb/ThiF domain|Schizosaccharomyces ... 31 0.092
SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase Pl... 29 0.37
SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces pom... 29 0.49
SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme Fub2|Schiz... 27 1.5
SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual 27 2.0
SPAC1952.01 ||SPAC1B3.19|Pig-U|Schizosaccharomyces pombe|chr 1||... 26 2.6
SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 26 3.5
SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces po... 26 3.5
SPAC19A8.15 |trp2||tryptophan synthase|Schizosaccharomyces pombe... 25 4.6
SPAC22F3.12c |rgs1||regulator of G-protein signaling Rgs1|Schizo... 25 6.1
SPCC18.13 |||tRNA |Schizosaccharomyces pombe|chr 3|||Manual 25 8.0
SPCC1183.07 |||U3 snoRNP-associated protein Rrp5|Schizosaccharom... 25 8.0
SPAC30C2.02 |mmd1||deoxyhypusine hydroxylase |Schizosaccharomyce... 25 8.0
SPCC794.08 |||HEAT repeat protein, unknown biological role|Schiz... 25 8.0
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 43.6 bits (98), Expect = 2e-05
Identities = 38/133 (28%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
Frame = +2
Query: 20 MSEVNDKIVIVTGGANGIGAFSVEVFIENQAKHVAILDIDTISGF-KLEKHLNTTYGDGK 196
MS ++ K +++TG ++GIG S I AK IL S ++ K L + Y +
Sbjct: 1 MSRLDGKTILITGASSGIGK-STAFEIAKVAKVKLILAARRFSTVEEIAKELESKY-EVS 58
Query: 197 VKFYKCDVSIDDQLFGAFNKVLDSHGYIDVVVNNAAVSLENSLEGIRRLVDINV-TALVM 373
V K DVS + G + IDV++NNA ++L G +++D+N+ A+ M
Sbjct: 59 VLPLKLDVSDLKSIPGVIESLPKEFADIDVLINNAGLAL-----GTDKVIDLNIDDAVTM 113
Query: 374 STLKAIEIMRVDK 412
T + +M + +
Sbjct: 114 ITTNVLGMMAMTR 126
>SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 261
Score = 41.5 bits (93), Expect = 7e-05
Identities = 33/92 (35%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Frame = +2
Query: 38 KIVIVTGGANGIGAFSVEVFIENQAKHVAILDIDTISGFKLEKHLNTTYGDGKVKFY--K 211
K +V GGA GIG VF E A A + +T G K K + G VK Y K
Sbjct: 22 KNAVVFGGARGIGHAICSVFAEAGAN--AFIVYNTTPGEKAAKEIAQANG---VKTYTCK 76
Query: 212 CDVSIDDQLFGAFNKVLDSHGYIDVVVNNAAV 307
CDV+I ++ AF ++ ID+VV N +
Sbjct: 77 CDVTIPKEVEHAFAEIQKVFDTIDIVVPNNGI 108
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 41.5 bits (93), Expect = 7e-05
Identities = 30/100 (30%), Positives = 51/100 (51%)
Frame = +2
Query: 29 VNDKIVIVTGGANGIGAFSVEVFIENQAKHVAILDIDTISGFKLEKHLNTTYGDGKVKFY 208
V ++V++TG A GIG ++F E + + ID + K++ D +
Sbjct: 3 VEGRVVLITGAAGGIGKVLCKMFTELGDR---VAGIDIVDPSKVQ--------DAALAL- 50
Query: 209 KCDVSIDDQLFGAFNKVLDSHGYIDVVVNNAAVSLENSLE 328
+ DVS DQ+ A KV+ + G IDV++NNA ++ + E
Sbjct: 51 QADVSKADQIETAIEKVIQTLGPIDVLINNAGLADDTPFE 90
Score = 27.5 bits (58), Expect = 1.1
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = +3
Query: 411 KQGKGGTIINISSI 452
KQGKGG+I+NI S+
Sbjct: 121 KQGKGGSIVNIGSV 134
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 35.5 bits (78), Expect = 0.004
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Frame = +2
Query: 20 MSEVNDKIVIVTGGANGIGAFSVEVFIENQAKHVAILDIDTISGFKLEKHLNTTYGDGKV 199
M + K ++TGG+ GIG FS+ +V +L + L +G +
Sbjct: 4 MFSLKGKTTLITGGSGGIG-FSIAKAFAAAGSNVGLLYGRNKKALEYAAELRDKHG-VQA 61
Query: 200 KFYKCDVSIDDQLFGAFNKVLDS-HGYIDVVVNNAAVSLEN-SLE 328
K Y C + + N+ ++ G +DV++ NA +++ + SLE
Sbjct: 62 KAYSCPIENRSAVIETTNQAVEELGGRLDVMIANAGIAIPHLSLE 106
>SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 247
Score = 35.5 bits (78), Expect = 0.004
Identities = 31/134 (23%), Positives = 65/134 (48%), Gaps = 3/134 (2%)
Frame = +2
Query: 20 MSEVNDKIVIVTGGANGIGAFSVEVFIENQAKHVAILDIDT--ISGFKLEKHLNTTYGDG 193
M+E +K++++TG + GIG + E ++ +AK +A+ T + ++ + + G
Sbjct: 1 MAETAEKVILLTGSSKGIGLATAEA-LQKKAKVIAVSRSLTPELETLLIQNPDSFVHVKG 59
Query: 194 KV-KFYKCDVSIDDQLFGAFNKVLDSHGYIDVVVNNAAVSLENSLEGIRRLVDINVTALV 370
V + K + + FG + V+ + G ++ + A + + R+L DIN ++V
Sbjct: 60 DVTEVGKASIETAIKKFGKLDSVILNAGVLEPIAKIA----DADINEWRKLFDINFFSVV 115
Query: 371 MSTLKAIEIMRVDK 412
+ AI +R K
Sbjct: 116 ETVKYAIPHLRKTK 129
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 33.9 bits (74), Expect = 0.013
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 6/133 (4%)
Frame = +2
Query: 44 VIVTGGANGIGAFSVEVFIENQAKHVAILDI-DTISGFKLEKHLNTTYGDGKVKFYKCDV 220
V++TG + G+G V+V + +A DTI T K+ K DV
Sbjct: 8 VLITGSSKGLGYALVKVGLAQGYNVIACSRAPDTI-----------TIEHSKLLKLKLDV 56
Query: 221 SIDDQLFGAFNKVLDSHGYIDVVVNNAAVSL-----ENSLEGIRRLVDINVTALVMSTLK 385
+ + AF G +D+V+NNA L ++E + R +++N + T +
Sbjct: 57 TDVKSVETAFKDAKRRFGNVDIVINNAGYGLVGEFESYNIEEMHRQMNVNFWGVAYITKE 116
Query: 386 AIEIMRVDKTGER 424
A+ +MR G R
Sbjct: 117 ALNLMRESGKGGR 129
>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 339
Score = 33.1 bits (72), Expect = 0.023
Identities = 20/94 (21%), Positives = 43/94 (45%)
Frame = +2
Query: 26 EVNDKIVIVTGGANGIGAFSVEVFIENQAKHVAILDIDTISGFKLEKHLNTTYGDGKVKF 205
++ K+ +VTG + GIG + AK V + + K+ K ++ K++F
Sbjct: 39 DLTGKVALVTGSSGGIGYVTALELARKGAK-VYLAGRNEEKYQKVMKQIHDEVRHSKIRF 97
Query: 206 YKCDVSIDDQLFGAFNKVLDSHGYIDVVVNNAAV 307
+ D+ + ++ A + + ++VNNA +
Sbjct: 98 LRLDLLDFESVYQAAESFIAKEEKLHILVNNAGI 131
>SPAC1A6.10 ||SPAC30D11.15c|Moeb/ThiF domain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 485
Score = 31.1 bits (67), Expect = 0.092
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +2
Query: 20 MSEVNDKIVIVTGGANGIGAFSVEVFIENQAKHVAILDIDTISGFKLEKHLNTTYGD 190
M + + VIV G G+G++ + + + + + I+D D +S L +H T D
Sbjct: 121 MERLRNSFVIVVG-CGGVGSWVINMLARSGVQKIRIVDFDQVSLSSLNRHSIATLQD 176
>SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase
Plh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 623
Score = 29.1 bits (62), Expect = 0.37
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Frame = -1
Query: 154 ESGNCVDVQDGNM----LGLIFNKYFNTKRTDAISTARNNY 44
E+G +D DG + LGL+ NK + TKR + +T+ NY
Sbjct: 517 ENGIVMDDGDGTLPILALGLVCNKVWQTKRFNPANTSITNY 557
>SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 397
Score = 28.7 bits (61), Expect = 0.49
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 26 EVNDKIVIVTGGANGIGAFSVEVFIENQAKHVAIL 130
++N +V+VTGG++GIG VE A+ V +L
Sbjct: 72 KMNGMVVMVTGGSSGIGQVVVEKLASLGAQVVILL 106
>SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme
Fub2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 27.1 bits (57), Expect = 1.5
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 38 KIVIVTGGANGIGAFSVEVFIENQAKHVAILDIDTI 145
K+++V GA GIG ++ + + K V I+D+DTI
Sbjct: 27 KVLLV--GAGGIGCELLKNLLMSGVKEVHIIDLDTI 60
>SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1489
Score = 26.6 bits (56), Expect = 2.0
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +2
Query: 140 TISGFKLEKH-LNTTYGDGKVKFYKCDVSIDDQLFGAFNKVL 262
TIS ++ K L T KV +C++ +DD L +NKVL
Sbjct: 1422 TISADEVGKFILEATSPTVKVSSPRCELHLDDLLSAQYNKVL 1463
>SPAC1952.01 ||SPAC1B3.19|Pig-U|Schizosaccharomyces pombe|chr
1|||Manual
Length = 408
Score = 26.2 bits (55), Expect = 2.6
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 212 CDVSIDDQLFGAFNKVLDSHGYIDVVVNNAAV 307
CD+SI L FNKV D Y ++ NNA V
Sbjct: 311 CDLSIFLSLLPIFNKVQDRMRY-SLLTNNAIV 341
>SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 236
Score = 25.8 bits (54), Expect = 3.5
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 215 DVSIDDQLFGAFNKVLDSHGYIDVVVNNAAVSLENSLE 328
DV+ + + K + G IDV++NNA S+ + LE
Sbjct: 22 DVNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLE 59
>SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 236
Score = 25.8 bits (54), Expect = 3.5
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 215 DVSIDDQLFGAFNKVLDSHGYIDVVVNNAAVSLENSLE 328
DV+ + + K + G IDV++NNA S+ + LE
Sbjct: 22 DVNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLE 59
>SPAC19A8.15 |trp2||tryptophan synthase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 697
Score = 25.4 bits (53), Expect = 4.6
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +2
Query: 68 GIGAFSVEVFIENQAKHVAILDIDTISGFKLEKHL 172
G+G E+ N+A+ +A+ D + GF+ HL
Sbjct: 602 GVGPELSELKYTNRAEFIAVTDAQCLEGFRALCHL 636
>SPAC22F3.12c |rgs1||regulator of G-protein signaling
Rgs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 481
Score = 25.0 bits (52), Expect = 6.1
Identities = 12/32 (37%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = -3
Query: 365 RR*HLCQLVFEYLQENFPTKQQR-YSQLHQYN 273
R+ +L FE+L++NF + QR YS++ ++N
Sbjct: 350 RKPNLQTYFFEFLKKNFCDENQRFYSEVCEFN 381
>SPCC18.13 |||tRNA |Schizosaccharomyces pombe|chr 3|||Manual
Length = 421
Score = 24.6 bits (51), Expect = 8.0
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -3
Query: 479 TGTKLFERCYRRDV 438
TG K+FE CYR ++
Sbjct: 38 TGEKIFEHCYRDNI 51
>SPCC1183.07 |||U3 snoRNP-associated protein Rrp5|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1690
Score = 24.6 bits (51), Expect = 8.0
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 130 GHRHNFRIQIGKTFKYYIRRWK 195
GH R++IG+ F +I+ WK
Sbjct: 1167 GHNLIARVKIGELFDTFIKDWK 1188
>SPAC30C2.02 |mmd1||deoxyhypusine hydroxylase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 318
Score = 24.6 bits (51), Expect = 8.0
Identities = 16/69 (23%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Frame = +2
Query: 245 AFNKVLDSHGYIDVVVNNAAVSL-----ENSLEGIRRLVDINVTALVMSTLKAIEIMRVD 409
A KVL++ + +V + AA +L + L +++ +V + S + A++++ +
Sbjct: 244 ALIKVLENTEEVPMVRHEAAEALGGIANDECLPVLKKFSKDDVRVVAESCIVALDMIEYE 303
Query: 410 KTGERRYDY 436
K+G+ Y Y
Sbjct: 304 KSGDMEYAY 312
>SPCC794.08 |||HEAT repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 798
Score = 24.6 bits (51), Expect = 8.0
Identities = 11/21 (52%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Frame = -1
Query: 166 FFQFESG-NCVDVQDGNMLGL 107
FF+ G +CVD Q MLGL
Sbjct: 147 FFELSKGIDCVDPQQSKMLGL 167
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,034,583
Number of Sequences: 5004
Number of extensions: 41545
Number of successful extensions: 135
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 131
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 188065158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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