Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt7f07
         (576 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   0.81 
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    23   1.9  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   1.9  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   1.9  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   2.5  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   3.3  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   5.7  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   7.5  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   9.9  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   9.9  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 24.2 bits (50), Expect = 0.81
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 170 CNSCFSGTGSPNKTGNFIH 226
           C+ C+S  G+ +K G  IH
Sbjct: 298 CDVCYSTIGTVSKAGELIH 316



 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +2

Query: 170 CNSCFSGTGSPNKTGNFIH 226
           C+ C+S     +K+G  IH
Sbjct: 926 CHVCYSTIQEVSKSGELIH 944


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 299 IGRVFSFEGLPIRRLH 252
           + +  SFE LP RRLH
Sbjct: 47  VSKPVSFESLPNRRLH 62


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +2

Query: 170 CNSCFSGTGSPNKTGNFIH 226
           C+ C+S     NK G  IH
Sbjct: 577 CDVCYSTIEEANKAGELIH 595


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +2

Query: 170 CNSCFSGTGSPNKTGNFIH 226
           C+ C+S     NK G  IH
Sbjct: 302 CDVCYSTIEEANKAGELIH 320


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 6/43 (13%)
 Frame = -3

Query: 124 IFNIFICSKVHRQNNLLQLPAQVC------LGVFSMLLNSQIM 14
           IF I I       +NL+Q    +C      LG+F    N Q++
Sbjct: 301 IFGIMITKACMSASNLIQRTPNICYKLLSNLGIFPKTTNEQLL 343


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -1

Query: 195 PVPLKQLLQNSLFAPEPICRRSATFLIYLYV 103
           P+PL  +   ++  P  IC  SA  LI++ V
Sbjct: 182 PLPLPPIFPPTMINPSAICE-SAAQLIFMNV 211


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -1

Query: 195 PVPLKQLLQNSLFAPEPICRRSATFL 118
           P+PL  +   ++  P  IC  +A  L
Sbjct: 182 PLPLPPIFAPTMINPSAICESAAQLL 207


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 359 LHSFVHICFVGMLDLSYNLAI 297
           LH F   C++ +L L  N+A+
Sbjct: 169 LHEFYGFCYLWVLILICNIAL 189


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -1

Query: 162 LFAPEPICRR 133
           +F PEP+C R
Sbjct: 234 VFRPEPLCER 243


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +3

Query: 396 RTMDASERGALINKLADLIERDRTYLASLETLDNG 500
           R MD   RG++  +   L  +  TY  ++    NG
Sbjct: 460 RGMDFQPRGSVFVRFTHLQHQPFTYKITVNNQSNG 494


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,010
Number of Sequences: 336
Number of extensions: 2964
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)