Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt7f07
(576 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_1105 + 9102059-9102167,9103770-9103907,9104125-9104267,910... 86 2e-17
06_03_0627 + 22903346-22903523,22906010-22906152,22906235-229066... 83 2e-16
01_05_0545 + 23109920-23110040,23113363-23113505,23113626-231140... 81 6e-16
02_05_0620 - 30412004-30412429,30412509-30412646,30412729-304128... 77 1e-14
01_05_0544 + 23098921-23098953,23099209-23099272,23099942-231000... 66 2e-11
04_04_0154 - 23146445-23146535,23146689-23146795,23146933-231469... 49 3e-06
02_01_0550 + 4044683-4044784,4044862-4044975,4045277-4045360,404... 39 1e-04
08_02_0717 + 20372728-20372836,20372936-20373078,20374131-203742... 37 0.010
01_01_0489 + 3608720-3608811,3609326-3609431,3609518-3609581,360... 31 0.50
05_05_0263 - 23673014-23673697,23673772-23674188 29 2.7
>06_01_1105 +
9102059-9102167,9103770-9103907,9104125-9104267,
9104362-9104515,9104610-9104839,9105382-9105471,
9105606-9105779,9105873-9106010,9106212-9106349,
9106450-9106511,9106744-9106972,9108531-9109364
Length = 812
Score = 86.2 bits (204), Expect = 2e-17
Identities = 46/121 (38%), Positives = 66/121 (54%)
Frame = +3
Query: 213 EILYTGLFINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSP 392
++ YT L I+ ++V S+ GKTF T +P G++IA V F G P
Sbjct: 65 QVNYTQLLIDGKFVDSASGKTFPTLDPRTGELIAHVAEGDAEDINRAVHAARKAFDEG-P 123
Query: 393 WRTMDASERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGW 572
W M A ER ++ + ADLIE+ +A+LET DNGKPY + ++ + +RYYAGW
Sbjct: 124 WPKMTAYERSRILLRFADLIEKHNDEIAALETWDNGKPYAQAANIEVPMVARLMRYYAGW 183
Query: 573 A 575
A
Sbjct: 184 A 184
>06_03_0627 +
22903346-22903523,22906010-22906152,22906235-22906618,
22906980-22907069,22907147-22907320,22907414-22907551,
22907719-22907856,22907958-22908019,22908240-22908513
Length = 526
Score = 83.0 bits (196), Expect = 2e-16
Identities = 48/121 (39%), Positives = 64/121 (52%)
Frame = +3
Query: 213 EILYTGLFINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSP 392
EI YT LFIN +V ++ GKTF+T +P G VIA V F G
Sbjct: 42 EIRYTKLFINGRFVDAASGKTFETRDPRTGDVIARVAEGDKEDVDLAVKAAREAFDHGE- 100
Query: 393 WRTMDASERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGW 572
W M SERG ++ K A+++ER LA+LE+LD GKP + D+ + LRY+AG
Sbjct: 101 WPRMSGSERGRVMAKYAEVVERHADELAALESLDAGKPLAAARAVDVGECVGILRYFAGA 160
Query: 573 A 575
A
Sbjct: 161 A 161
>01_05_0545 +
23109920-23110040,23113363-23113505,23113626-23114009,
23114106-23114219,23114310-23114483,23114608-23114745,
23114884-23115021,23115094-23115155,23115268-23115541
Length = 515
Score = 81.0 bits (191), Expect = 6e-16
Identities = 46/121 (38%), Positives = 64/121 (52%)
Frame = +3
Query: 213 EILYTGLFINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSP 392
EI +T LFIN E+V ++ GKTFKT +P G V+A + F+ G
Sbjct: 23 EIKFTKLFINGEFVDAASGKTFKTRDPRTGDVLAHIAEADKADVDLAVKAAREAFEHGK- 81
Query: 393 WRTMDASERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGW 572
W M ER ++NKLADL+E+ LA+L+ D GK D+ A+ + +RYYAG
Sbjct: 82 WPRMSGYERSRVMNKLADLVEQHADELAALDGADAGKLLTLGKIIDMPAAAQMMRYYAGA 141
Query: 573 A 575
A
Sbjct: 142 A 142
>02_05_0620 -
30412004-30412429,30412509-30412646,30412729-30412866,
30412966-30413139,30413211-30413684,30413775-30413917,
30414002-30414160,30414943-30415042
Length = 583
Score = 77.0 bits (181), Expect = 1e-14
Identities = 43/121 (35%), Positives = 61/121 (50%)
Frame = +3
Query: 213 EILYTGLFINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSP 392
++ YT L IN +V ++ GKTF T +P G VIA V F G P
Sbjct: 69 DVKYTKLLINGNFVDAASGKTFATVDPRTGDVIARVAEGDAEDVNRAVAAARRAFDEG-P 127
Query: 393 WRTMDASERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGW 572
W M A ER ++ + ADLIE+ +A+LET D GK + + ++ + +RYY GW
Sbjct: 128 WPRMTAYERCRVLLRFADLIEQHADEIAALETWDGGKTLEQTTGTEVPMVARYMRYYGGW 187
Query: 573 A 575
A
Sbjct: 188 A 188
>01_05_0544 +
23098921-23098953,23099209-23099272,23099942-23100084,
23100246-23100719,23100950-23101123,23101230-23101367,
23101489-23101589,23101910-23102183
Length = 466
Score = 66.1 bits (154), Expect = 2e-11
Identities = 37/103 (35%), Positives = 52/103 (50%)
Frame = +3
Query: 267 GKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMDASERGALINKLAD 446
GKTF+T +P G+VIA++ F G PW M RG +++K AD
Sbjct: 33 GKTFETRDPRTGEVIAKIAEGDKADIDLAVKAAREAFDHG-PWPRMSGFARGRILHKFAD 91
Query: 447 LIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWA 575
L+E+ LA+L+T+D GK + D+ LRYYAG A
Sbjct: 92 LVEQHVEELAALDTVDAGKLFAMGKLVDIPGGANLLRYYAGAA 134
>04_04_0154 -
23146445-23146535,23146689-23146795,23146933-23146993,
23147070-23147221,23147306-23147383,23147696-23147809,
23147880-23147956,23148128-23148194,23148341-23148406,
23148528-23148651,23148733-23148825,23149446-23149594,
23149681-23149761,23150502-23150644,23150758-23150872
Length = 505
Score = 48.8 bits (111), Expect = 3e-06
Identities = 35/118 (29%), Positives = 47/118 (39%), Gaps = 2/118 (1%)
Frame = +3
Query: 228 GLFINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKL--GSPWRT 401
GLFI W + S G+ NPA I ++ F G W
Sbjct: 11 GLFIGGGWREPSLGRRLPVVNPATEATIGDIPAATAEDVELAVSAARDAFGRDGGRHWSR 70
Query: 402 MDASERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWA 575
+ R + +A I+ ++YLA LETLD+GKP D GD+ YYA A
Sbjct: 71 APGAVRAKYLKAIAAKIKDKKSYLALLETLDSGKPL-DEAAGDMEDVAACFEYYADLA 127
>02_01_0550 +
4044683-4044784,4044862-4044975,4045277-4045360,
4045818-4045917,4046923-4046971,4047071-4047158,
4047251-4047361,4047771-4047833,4047942-4048052,
4048517-4048582,4048689-4048766,4049553-4049630,
4049784-4049850,4049930-4050015,4050301-4050333,
4050426-4050458,4050754-4050854,4050986-4051071,
4051478-4051584,4051683-4051839,4051854-4051984
Length = 614
Score = 39.1 bits (87), Expect(2) = 1e-04
Identities = 27/97 (27%), Positives = 41/97 (42%)
Frame = +3
Query: 276 FKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMDASERGALINKLADLIE 455
+ +NPA G+ +A V F W + A+ER + K DLI
Sbjct: 99 YLVQNPATGETLANVSCMGSKETSDAIASAHSTFY---SWSKLTANERSKALRKWHDLII 155
Query: 456 RDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYA 566
+ LA L TL+ GKP K++ Y + + Y+A
Sbjct: 156 SHKEELALLMTLEQGKPMKEALVEVTYGA-SFIEYFA 191
Score = 23.4 bits (48), Expect(2) = 1e-04
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 216 ILYTGLFINNEWVKSSDGKTFKTEN 290
+L T I +WV + DGKT + N
Sbjct: 51 LLRTQGLIGGKWVDAYDGKTIEVVN 75
>08_02_0717 +
20372728-20372836,20372936-20373078,20374131-20374211,
20374307-20374510,20374789-20374796,20375153-20375245,
20375377-20375500,20375585-20375650,20375841-20375907,
20376600-20376676,20377032-20377145,20377546-20377623,
20377705-20377856,20377960-20378020,20378292-20378398,
20378497-20378562,20379099-20379177,20379671-20379967
Length = 641
Score = 37.1 bits (82), Expect = 0.010
Identities = 26/98 (26%), Positives = 37/98 (37%), Gaps = 2/98 (2%)
Frame = +3
Query: 231 LFINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKL--GSPWRTM 404
LF+ EW + G+ NPA I E+ K G W
Sbjct: 10 LFVAGEWRAPALGRRLPVVNPATESPIGEIPAGTAEDVDAAVAAAREALKRNRGRDWARA 69
Query: 405 DASERGALINKLADLIERDRTYLASLETLDNGKPYKDS 518
+ R + +A I ++ LA LETLD GKP ++
Sbjct: 70 PGAVRAKYLRAIAAKIIERKSELARLETLDCGKPLDEA 107
>01_01_0489 +
3608720-3608811,3609326-3609431,3609518-3609581,
3609905-3609965,3610017-3610144,3610236-3610385,
3610537-3610791,3611060-3611265,3611469-3611696,
3612161-3612259
Length = 462
Score = 31.5 bits (68), Expect = 0.50
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +3
Query: 435 KLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKN 551
K+ L R YLASL + D+ P KD F ++YA+ N
Sbjct: 287 KIYRLRNPSRKYLASLSSYDSSNPTKDWGFPNIYANSDN 325
>05_05_0263 - 23673014-23673697,23673772-23674188
Length = 366
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 381 LGSPWRTMDASERGALINKLADLIERDR 464
+ SPWR +DA G ++ +L L++R R
Sbjct: 1 MDSPWRDLDADVLGFILKRLPCLVDRRR 28
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,956,837
Number of Sequences: 37544
Number of extensions: 301435
Number of successful extensions: 770
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1340735508
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -