Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt7f07
         (576 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U12966-1|AAA20615.3|  510|Caenorhabditis elegans Aldehyde dehydr...   147   6e-36
AF106575-1|AAC78174.2|  537|Caenorhabditis elegans Aldehyde dehy...   134   3e-32
U12966-2|AAN63391.1|  422|Caenorhabditis elegans Aldehyde dehydr...    91   5e-19
Z68760-14|CAA92998.2|  908|Caenorhabditis elegans Hypothetical p...    76   2e-14
Z68748-13|CAA92957.2|  908|Caenorhabditis elegans Hypothetical p...    76   2e-14
Z81538-1|CAB04383.1|  569|Caenorhabditis elegans Hypothetical pr...    49   3e-06
U46673-3|AAC48151.1|  506|Caenorhabditis elegans Aldehyde dehydr...    48   4e-06
AC006814-2|AAP46269.1|  430|Caenorhabditis elegans Aldehyde dehy...    38   0.005
AC006814-1|AAP46268.1|  499|Caenorhabditis elegans Aldehyde dehy...    38   0.005
Z49127-3|CAA88946.1|  523|Caenorhabditis elegans Hypothetical pr...    34   0.083
U00051-9|AAM29693.1|  503|Caenorhabditis elegans Aldehyde dehydr...    33   0.19 
U00051-8|AAA91356.1|  687|Caenorhabditis elegans Aldehyde dehydr...    33   0.19 
AL132860-13|CAB60509.1|  292|Caenorhabditis elegans Hypothetical...    29   2.4  
Z81489-1|CAB04005.2|  266|Caenorhabditis elegans Hypothetical pr...    27   7.2  
Z71259-1|CAA95789.1|  360|Caenorhabditis elegans Hypothetical pr...    27   7.2  
Z81119-4|CAB03335.2|  389|Caenorhabditis elegans Hypothetical pr...    27   9.5  

>U12966-1|AAA20615.3|  510|Caenorhabditis elegans Aldehyde
           dehydrogenase protein1, isoform a protein.
          Length = 510

 Score =  147 bits (356), Expect = 6e-36
 Identities = 69/118 (58%), Positives = 84/118 (71%)
 Frame = +3

Query: 222 YTGLFINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRT 401
           YTG+FINNE+V +  GKTF+T NPANG+V+A+V                  F++GS WR 
Sbjct: 29  YTGIFINNEFVPAKSGKTFETINPANGKVLAQVAEGDKTDVNIAVKAAQNAFRIGSEWRR 88

Query: 402 MDASERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWA 575
           MDAS+RG L+N+LADL+ERDR  LASLE+LDNGKPY  +Y  DL  SIK LRYYAGWA
Sbjct: 89  MDASQRGVLLNRLADLMERDRVILASLESLDNGKPYAVAYNADLPLSIKTLRYYAGWA 146


>AF106575-1|AAC78174.2|  537|Caenorhabditis elegans Aldehyde
           dehydrogenase protein 2 protein.
          Length = 537

 Score =  134 bits (325), Expect = 3e-32
 Identities = 65/115 (56%), Positives = 80/115 (69%)
 Frame = +3

Query: 231 LFINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMDA 410
           LFINNE+V +  GKTF+  NPANG+++A+V                  FK+GS WR MDA
Sbjct: 59  LFINNEFVDAKSGKTFEFVNPANGKLLAKVAEGNRDDVDIAVEAAKKAFKIGSEWRRMDA 118

Query: 411 SERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWA 575
           S RG L+N+LADL+ERDR  LASLE+LDNGKPYK++Y  DL  SIK  RYYAG+A
Sbjct: 119 SHRGVLLNRLADLMERDRVILASLESLDNGKPYKEAYNIDLPISIKTFRYYAGYA 173


>U12966-2|AAN63391.1|  422|Caenorhabditis elegans Aldehyde
           dehydrogenase protein1, isoform b protein.
          Length = 422

 Score = 91.1 bits (216), Expect = 5e-19
 Identities = 42/58 (72%), Positives = 48/58 (82%)
 Frame = +3

Query: 402 MDASERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWA 575
           MDAS+RG L+N+LADL+ERDR  LASLE+LDNGKPY  +Y  DL  SIK LRYYAGWA
Sbjct: 1   MDASQRGVLLNRLADLMERDRVILASLESLDNGKPYAVAYNADLPLSIKTLRYYAGWA 58


>Z68760-14|CAA92998.2|  908|Caenorhabditis elegans Hypothetical
           protein F36H1.6 protein.
          Length = 908

 Score = 76.2 bits (179), Expect = 2e-14
 Identities = 45/113 (39%), Positives = 61/113 (53%)
 Frame = +3

Query: 234 FINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMDAS 413
           FI+ ++V SSDG+TFKT NPA  + I E+                  F+ G  WR M A 
Sbjct: 431 FIDGKFVGSSDGRTFKTINPATEKPICELPLATVADVDRAVRAAKKAFERGE-WRQMSAR 489

Query: 414 ERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGW 572
           ERG  + KLA+L+E  +  LA+LE+LD G  Y  +    +  SI   RY+AGW
Sbjct: 490 ERGKRLYKLAELMEEHKEELATLESLDAGAVYTLALKTHVGMSIDVWRYFAGW 542


>Z68748-13|CAA92957.2|  908|Caenorhabditis elegans Hypothetical
           protein F36H1.6 protein.
          Length = 908

 Score = 76.2 bits (179), Expect = 2e-14
 Identities = 45/113 (39%), Positives = 61/113 (53%)
 Frame = +3

Query: 234 FINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMDAS 413
           FI+ ++V SSDG+TFKT NPA  + I E+                  F+ G  WR M A 
Sbjct: 431 FIDGKFVGSSDGRTFKTINPATEKPICELPLATVADVDRAVRAAKKAFERGE-WRQMSAR 489

Query: 414 ERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGW 572
           ERG  + KLA+L+E  +  LA+LE+LD G  Y  +    +  SI   RY+AGW
Sbjct: 490 ERGKRLYKLAELMEEHKEELATLESLDAGAVYTLALKTHVGMSIDVWRYFAGW 542


>Z81538-1|CAB04383.1|  569|Caenorhabditis elegans Hypothetical
           protein F45H10.1 protein.
          Length = 569

 Score = 48.8 bits (111), Expect = 3e-06
 Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 1/115 (0%)
 Frame = +3

Query: 234 FINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPW-RTMDA 410
           +I  +W  S  G +F   NP N +V+    +                F     W  T  A
Sbjct: 21  YIGGKWTASETGNSFDVLNPFNNEVVDRATNCTVKDAEKAVHSALEGF---DKWAHTYSA 77

Query: 411 SERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWA 575
            +RGA+++K  +++ +  T LA+L T + GKP  ++  G++  S     +YAG A
Sbjct: 78  KQRGAILHKWFEILVQRETELATLLTKEQGKPLAEAR-GEIQYSAAYFDWYAGEA 131


>U46673-3|AAC48151.1|  506|Caenorhabditis elegans Aldehyde
           dehydrogenase protein 10 protein.
          Length = 506

 Score = 48.4 bits (110), Expect = 4e-06
 Identities = 33/114 (28%), Positives = 52/114 (45%)
 Frame = +3

Query: 234 FINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMDAS 413
           FI NE+ +S   K   + NP+ G+   ++                  FK    W+     
Sbjct: 31  FIGNEFARSE--KLMDSVNPSTGKPWIKIPDGTAREVDQAVEAAKEAFKT---WKKTTVQ 85

Query: 414 ERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWA 575
           +R AL+NK+A+LIE     +A LE+ D GKP   +   D+   ++N R +A  A
Sbjct: 86  QRSALLNKVANLIEEFNDDIAILESRDQGKPIGLAKVMDIPRCVQNFRDFANAA 139


>AC006814-2|AAP46269.1|  430|Caenorhabditis elegans Aldehyde
           dehydrogenase protein12, isoform b protein.
          Length = 430

 Score = 37.9 bits (84), Expect = 0.005
 Identities = 29/114 (25%), Positives = 46/114 (40%)
 Frame = +3

Query: 234 FINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMDAS 413
           F+N +       +TF    P  GQV+A+                       S W    A 
Sbjct: 15  FLNGKRTTIESTETFDVIEPRIGQVVAKCPKATADIVDQYVKAAADA---QSAWGETTAL 71

Query: 414 ERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWA 575
           +RG +++K+ADLI      +A  E   NGKP  ++   D+ +S     ++ G A
Sbjct: 72  DRGKVLHKVADLIREHAEEIAIWEVKTNGKPIYEARC-DIASSADTFDFFGGIA 124


>AC006814-1|AAP46268.1|  499|Caenorhabditis elegans Aldehyde
           dehydrogenase protein12, isoform a protein.
          Length = 499

 Score = 37.9 bits (84), Expect = 0.005
 Identities = 29/114 (25%), Positives = 46/114 (40%)
 Frame = +3

Query: 234 FINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMDAS 413
           F+N +       +TF    P  GQV+A+                       S W    A 
Sbjct: 15  FLNGKRTTIESTETFDVIEPRIGQVVAKCPKATADIVDQYVKAAADA---QSAWGETTAL 71

Query: 414 ERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWA 575
           +RG +++K+ADLI      +A  E   NGKP  ++   D+ +S     ++ G A
Sbjct: 72  DRGKVLHKVADLIREHAEEIAIWEVKTNGKPIYEARC-DIASSADTFDFFGGIA 124


>Z49127-3|CAA88946.1|  523|Caenorhabditis elegans Hypothetical
           protein F13D12.4a protein.
          Length = 523

 Score = 33.9 bits (74), Expect = 0.083
 Identities = 26/96 (27%), Positives = 40/96 (41%)
 Frame = +3

Query: 231 LFINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMDA 410
           L+I+ + V+S      +  NPA  +VIA V +                F   + W+    
Sbjct: 32  LWIDGQAVESKTTDFVELTNPATNEVIAMVPNATQAEMQAAVDSAKNAF---NTWKNTSP 88

Query: 411 SERGALINKLADLIERDRTYLASLETLDNGKPYKDS 518
             R   + KL  LI+RD   LA   T++ GK   D+
Sbjct: 89  LTRQQCMFKLQALIKRDMKKLAESITIEQGKTLPDA 124


>U00051-9|AAM29693.1|  503|Caenorhabditis elegans Aldehyde
           dehydrogenase protein11, isoform b protein.
          Length = 503

 Score = 32.7 bits (71), Expect = 0.19
 Identities = 17/66 (25%), Positives = 30/66 (45%)
 Frame = +3

Query: 378 KLGSPWRTMDASERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLR 557
           K    W      ER  ++ K  DL++     +A  E + NGKP  ++   D+ + +    
Sbjct: 70  KAQKQWAKSSWMERSEILKKTGDLLKTHCNDIAYWECISNGKPIAEAK-ADVLSCVDTFY 128

Query: 558 YYAGWA 575
           +Y+G A
Sbjct: 129 FYSGIA 134


>U00051-8|AAA91356.1|  687|Caenorhabditis elegans Aldehyde
           dehydrogenase protein11, isoform a protein.
          Length = 687

 Score = 32.7 bits (71), Expect = 0.19
 Identities = 17/66 (25%), Positives = 30/66 (45%)
 Frame = +3

Query: 378 KLGSPWRTMDASERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLR 557
           K    W      ER  ++ K  DL++     +A  E + NGKP  ++   D+ + +    
Sbjct: 254 KAQKQWAKSSWMERSEILKKTGDLLKTHCNDIAYWECISNGKPIAEAK-ADVLSCVDTFY 312

Query: 558 YYAGWA 575
           +Y+G A
Sbjct: 313 FYSGIA 318


>AL132860-13|CAB60509.1|  292|Caenorhabditis elegans Hypothetical
           protein Y56A3A.15 protein.
          Length = 292

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 15/40 (37%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
 Frame = -3

Query: 121 FNIFICSKVHRQNNLLQL-PAQVCLGVFSMLLNSQIM*HN 5
           F + I S   + ++LL+L P+   LGV+++ +N+QI+ HN
Sbjct: 145 FGVKIASSEIQSSHLLELFPSLSNLGVYNVPINTQILTHN 184


>Z81489-1|CAB04005.2|  266|Caenorhabditis elegans Hypothetical
           protein C55A1.1 protein.
          Length = 266

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +3

Query: 450 IERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYA 566
           I  + T L+  E+     PYKD +FG   A + N  YYA
Sbjct: 23  IVSETTVLSIKESFVVVVPYKDRFFGRNTAMVLNCIYYA 61


>Z71259-1|CAA95789.1|  360|Caenorhabditis elegans Hypothetical
           protein F13G3.1 protein.
          Length = 360

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 14/24 (58%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
 Frame = -1

Query: 555 VGFLLKHTDH-RNTSPCMVCRCPA 487
           V  L  H  H  NTSPC VCRC A
Sbjct: 192 VSVLNSHVSHLHNTSPC-VCRCGA 214


>Z81119-4|CAB03335.2|  389|Caenorhabditis elegans Hypothetical
           protein T10H4.5 protein.
          Length = 389

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 8/34 (23%), Positives = 23/34 (67%)
 Frame = -3

Query: 127 NIFNIFICSKVHRQNNLLQLPAQVCLGVFSMLLN 26
           N+++ F C+ ++++ +++     +CL  F++L+N
Sbjct: 16  NLYDNFHCADIYKKISMVLSDINICLQFFTVLIN 49


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,077,694
Number of Sequences: 27780
Number of extensions: 271165
Number of successful extensions: 628
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 621
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)