Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt7f03
         (590 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles ...   178   1e-46
AJ973471-1|CAJ01518.1|  122|Anopheles gambiae hypothetical prote...    24   4.2  
AJ697731-1|CAG26924.1|  122|Anopheles gambiae putative chemosens...    24   4.2  
AJ697730-1|CAG26923.1|  122|Anopheles gambiae putative chemosens...    24   4.2  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   7.4  
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    23   9.8  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    23   9.8  

>U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles
           gambiae putativeribosomal protein S8 mRNA, complete cds.
           ).
          Length = 135

 Score =  178 bits (433), Expect = 1e-46
 Identities = 81/117 (69%), Positives = 101/117 (86%)
 Frame = +3

Query: 240 RKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAE 419
           RK RIIDVVYNASNNEL+RTKTLVKNAI+V+DA+PFRQWYESHY LPLG+K+  +L   E
Sbjct: 3   RKARIIDVVYNASNNELIRTKTLVKNAIIVIDASPFRQWYESHYLLPLGKKR--ELKAGE 60

Query: 420 EAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQCGRADGYIL 590
           E +++KKR++   RKY+ RQ+ AK++ A+EEQF+ GRLLAC++SRPGQ GRADGYIL
Sbjct: 61  EDVLSKKRTKSNLRKYVKRQKNAKIDPAVEEQFNAGRLLACISSRPGQVGRADGYIL 117


>AJ973471-1|CAJ01518.1|  122|Anopheles gambiae hypothetical protein
           protein.
          Length = 122

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 329 YNNCILDKGLCTHQ 288
           Y  C+LDKG CT +
Sbjct: 44  YLKCLLDKGPCTQE 57


>AJ697731-1|CAG26924.1|  122|Anopheles gambiae putative chemosensory
           protein CSP2 protein.
          Length = 122

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 329 YNNCILDKGLCTHQ 288
           Y  C+LDKG CT +
Sbjct: 44  YLKCLLDKGPCTQE 57


>AJ697730-1|CAG26923.1|  122|Anopheles gambiae putative chemosensory
           protein CSP1 protein.
          Length = 122

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 329 YNNCILDKGLCTHQ 288
           Y  C+LDKG CT +
Sbjct: 44  YLKCLLDKGPCTQE 57


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 118 LQTPGSALSESTPFVHVVEILSTV 189
           + TP  A++ STPF+    +LS +
Sbjct: 527 VNTPAGAINMSTPFIDSEIVLSAL 550


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 333 DATPFRQWYESHYTLP 380
           D TP   W+ SH T P
Sbjct: 43  DQTPAGSWWSSHLTEP 58


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 333 DATPFRQWYESHYTLP 380
           D TP   W+ SH T P
Sbjct: 43  DQTPAGSWWSSHLTEP 58


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 641,068
Number of Sequences: 2352
Number of extensions: 13075
Number of successful extensions: 37
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56768445
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)