Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt7e19
(691 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_1105 + 30438140-30438350,30438448-30438926 42 6e-04
07_01_0553 - 4119782-4119988,4120160-4120320,4120861-4121155 40 0.002
05_04_0254 - 19444409-19444621,19444724-19444887,19444974-194450... 39 0.004
11_06_0192 + 21128298-21128829,21129341-21129407,21131169-211312... 38 0.006
03_06_0292 - 32886148-32886354,32886997-32887154,32887265-328873... 36 0.030
01_07_0095 + 41053562-41053603,41054609-41054846,41055064-410553... 35 0.053
01_05_0710 + 24492337-24493053 33 0.21
07_03_1631 - 28258897-28259984,28260518-28260772,28260861-282609... 30 1.5
02_01_0302 - 2021221-2023305 30 1.5
04_04_0824 - 28399144-28399385,28400193-28400312,28400422-284004... 30 2.0
04_04_0662 - 27051508-27051828,27051878-27053438,27054333-27054733 29 2.6
09_03_0089 + 12265916-12267232 29 3.5
08_01_1022 + 10323158-10323393,10323486-10323531,10325887-103259... 29 3.5
03_05_0306 - 22956474-22956980 29 4.6
12_02_0065 - 13109652-13110746,13110843-13111762,13139462-131395... 28 6.1
10_08_0888 - 21317163-21317687,21318044-21318153,21318258-21318408 28 8.0
08_02_0969 - 23126389-23126670,23126764-23126947,23127017-231278... 28 8.0
08_01_0445 + 3942820-3943030,3943719-3943853,3943942-3944150,394... 28 8.0
05_05_0033 + 21737075-21737721,21737819-21738134,21738463-21739722 28 8.0
05_03_0122 - 8669422-8669609,8669759-8670111,8670669-8670824,867... 28 8.0
04_04_1400 - 33259716-33260069,33260172-33260219,33260471-332605... 28 8.0
>03_05_1105 + 30438140-30438350,30438448-30438926
Length = 229
Score = 41.5 bits (93), Expect = 6e-04
Identities = 20/60 (33%), Positives = 35/60 (58%)
Frame = +1
Query: 508 IRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVCLIAMAC 687
+R AF+RKVYAIL Q+++T+ ++ ++ RP ++ P F +I LI+ + C
Sbjct: 15 LRWAFVRKVYAILSIQMLLTIAVASVVVFVRPVALFFVSTPAGF-ALYIFLIILPFIVLC 73
>07_01_0553 - 4119782-4119988,4120160-4120320,4120861-4121155
Length = 220
Score = 39.5 bits (88), Expect = 0.002
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Frame = +1
Query: 457 SVGEDGEVKGFDFTEKSIRRAFIRKVYAILMCQLMVTMGFIALFLYHRPT--KVWVAQNP 630
+VG G + +R AFIRKVYAI+ QL+VT+ IA +Y P + ++A+ P
Sbjct: 25 AVGVAGVACTYMIERPELRWAFIRKVYAIVATQLVVTVA-IAAAVYSVPAIRRFFLARTP 83
Query: 631 FMFWVAFIVLIVCLIA 678
+V++ LIA
Sbjct: 84 ASLAAFVLVIVAPLIA 99
>05_04_0254 -
19444409-19444621,19444724-19444887,19444974-19445087,
19446086-19446395
Length = 266
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/66 (28%), Positives = 34/66 (51%)
Frame = +1
Query: 484 GFDFTEKSIRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLI 663
G E ++R F+RKVY IL QL++T AL + H ++ +P + V ++
Sbjct: 43 GISRGESALRWGFVRKVYGILAAQLLLTTAVSALTVLHPTLNATLSSSPTLALVLAVLPF 102
Query: 664 VCLIAM 681
V ++ +
Sbjct: 103 VLMVPL 108
>11_06_0192 +
21128298-21128829,21129341-21129407,21131169-21131211,
21131301-21131367,21131613-21131770,21131863-21132057
Length = 353
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +1
Query: 508 IRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVCLIAMAC 687
+R AF+RKVY IL Q VT + RP + A W+ ++ +++C C
Sbjct: 79 LRWAFVRKVYCILALQFAVTAAIAVVAWAVRPIPRFFAAGSLASWLVYLAILLCPFIGLC 138
>03_06_0292 -
32886148-32886354,32886997-32887154,32887265-32887378,
32887660-32887924
Length = 247
Score = 35.9 bits (79), Expect = 0.030
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +1
Query: 508 IRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVCLIAM 681
+R AFIRKVY I+ QL+VT+ P K + VA++++I+ + M
Sbjct: 32 LRWAFIRKVYVIVSVQLLVTVAVAGAVNLVEPIKTFFQARTPEVLVAYVIIIISPLIM 89
>01_07_0095 +
41053562-41053603,41054609-41054846,41055064-41055312,
41055419-41055469,41056044-41056256,41056305-41056367,
41056422-41056474,41056953-41057067,41057150-41057404,
41057531-41058618
Length = 788
Score = 35.1 bits (77), Expect = 0.053
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +1
Query: 493 FTEKSIRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVCL 672
FT S+R AFI +Y L+ Q M F++ + PT + + +FW F+V +
Sbjct: 297 FTSASVRLAFITIIYPCLILQYMGQAAFLSKNILDMPTGFYDSIPGPIFWPVFVVATLAA 356
Query: 673 I 675
+
Sbjct: 357 V 357
>01_05_0710 + 24492337-24493053
Length = 238
Score = 33.1 bits (72), Expect = 0.21
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = -2
Query: 450 RWDIARFTVTSAAICRLEARLRGRISALRVCSTRGIRSSWRVSSTLR 310
R D A F V A +CRLE R ++ALR + GIR+S ++ ++R
Sbjct: 153 RPDSATFAVAVAGLCRLEDP-RNALAALREMAVDGIRTSAKLRESVR 198
>07_03_1631 -
28258897-28259984,28260518-28260772,28260861-28260975,
28261097-28261149,28261238-28261498,28262122-28262175,
28262294-28262536,28262830-28263073,28263877-28263909
Length = 781
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/61 (24%), Positives = 28/61 (45%)
Frame = +1
Query: 493 FTEKSIRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVCL 672
FT SIR AF+ +Y L+ Q M F++ + + + +FW F++ +
Sbjct: 290 FTAASIRLAFVGAIYPCLVLQYMGQAAFLSRNMSAVEDSFYQSVPRSLFWPVFVIATLAA 349
Query: 673 I 675
+
Sbjct: 350 V 350
>02_01_0302 - 2021221-2023305
Length = 694
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/67 (29%), Positives = 25/67 (37%)
Frame = +3
Query: 189 GPTKLREHVSESRRTVPSGRGVPARWTVPARWTVPTGWRLPARWSLPSRRSVSPGWSIPA 368
G H S T PS P+ T P+ + P G P+ S PS + P S P
Sbjct: 476 GKPSTPSHPSPPGSTTPSYPSPPSSSTTPSYHSPPQGHTTPSHPSPPSSSTAPPSHSPPQ 535
Query: 369 GRICAPS 389
PS
Sbjct: 536 STPTHPS 542
>04_04_0824 -
28399144-28399385,28400193-28400312,28400422-28400453,
28400531-28400625,28400713-28400786,28400883-28401018,
28401096-28401333,28401508-28401555,28401593-28401780,
28401862-28401983,28402061-28402226,28402321-28402443,
28403068-28403139,28403244-28403351,28404212-28404328,
28404458-28404596,28404702-28404808,28404904-28405013,
28405141-28405274,28405348-28405497,28405571-28405791,
28405868-28406677,28410261-28410473
Length = 1254
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = +3
Query: 513 QGFHPKGVRDPDVSADGDDGFHRSVPVPPTDQSLGGPKSLHVLGG 647
QG H G P+ G G H PP Q GG S H GG
Sbjct: 150 QGSHHPGGGPPEYQGRGGPGSHHPGGGPPDYQGRGGSGSHHPGGG 194
>04_04_0662 - 27051508-27051828,27051878-27053438,27054333-27054733
Length = 760
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = -2
Query: 591 QEQSDETHRHHQLTHQDRVHLSDESPAYRFFSEIETLDFA 472
+E+ + H++++ T + R D +YRFF+E+E L A
Sbjct: 149 KEKFENVHKYYKRTKEGRAGRQD-GKSYRFFTELEALHAA 187
>09_03_0089 + 12265916-12267232
Length = 438
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +3
Query: 561 GDDGFHRSVPVPPTDQSLGGPKSLHVLGGLHSADSLSH 674
G H + P P + LGG SL GGL S+D+L H
Sbjct: 330 GGARLHDASPSPSFSEFLGGGISLTDGGGLMSSDALHH 367
>08_01_1022 +
10323158-10323393,10323486-10323531,10325887-10325941,
10326027-10326107,10326189-10326400
Length = 209
Score = 29.1 bits (62), Expect = 3.5
Identities = 27/98 (27%), Positives = 43/98 (43%)
Frame = +2
Query: 224 KADRTLRAGRTRKVDRTRKVDRTHRVEVTRKVELTLQEERIPRVEHTRRADMRPLSLASN 403
KA +L AGR ++ R VD L+L EE++ R E +A +RP + +
Sbjct: 66 KAAASLFAGR--QLSRCSGVDPDEHPIKKEFERLSLWEEKLNRFEDWDKAPLRPTTTVNT 123
Query: 404 LHMAALVTVNRAISHRTTQSAKMAKSRVSISLKNLYAG 517
AA + ++ H TT K + +S Y+G
Sbjct: 124 --QAAARFIGHSLPHLTTDQ-KRSMQAISRGEGGSYSG 158
>03_05_0306 - 22956474-22956980
Length = 168
Score = 28.7 bits (61), Expect = 4.6
Identities = 31/99 (31%), Positives = 39/99 (39%)
Frame = +3
Query: 198 KLREHVSESRRTVPSGRGVPARWTVPARWTVPTGWRLPARWSLPSRRSVSPGWSIPAGRI 377
K +EH + SRR P+ G P RW + R PT W + + S R GW G
Sbjct: 56 KAQEHGAWSRRASPASWGEP-RW-LARRPAFPT-WESSRKEASGSSRPGGMGWQKREGG- 111
Query: 378 CAPSAWLPTCIWRRWLR*TGLYPTERLSRRRWRSQGFRF 494
P W R L TG E + R S+ RF
Sbjct: 112 -DPGGWRRA---RPHLGDTGTEVGEEAAHRGGMSEAGRF 146
>12_02_0065 -
13109652-13110746,13110843-13111762,13139462-13139528,
13139607-13139675,13139877-13140020,13140100-13140171,
13140316-13140387,13140466-13140558,13140655-13140726,
13140809-13140925
Length = 906
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = +3
Query: 252 VPARWTVPARWTVPTGWRLPARWSLPSRRS 341
V A PAR P+ WR P R S PSRRS
Sbjct: 6 VAAAAAAPARSRWPS-WRTPPRSSTPSRRS 34
>10_08_0888 - 21317163-21317687,21318044-21318153,21318258-21318408
Length = 261
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +3
Query: 180 KLEGPTKLREHVSESRRTVPSGRGVPARW 266
+L+GP LR VSES +TV + + +PA W
Sbjct: 221 RLQGPFSLRM-VSESGQTVIAHQVIPANW 248
>08_02_0969 -
23126389-23126670,23126764-23126947,23127017-23127834,
23127953-23128642
Length = 657
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +3
Query: 531 GVRDPDVSADGDDGFHRSVPVPPTDQSLGGPKS 629
G DP AD +DG P PP+ G +S
Sbjct: 549 GTLDPMADADANDGSQMQTPAPPSPAGEGRRRS 581
>08_01_0445 +
3942820-3943030,3943719-3943853,3943942-3944150,
3944258-3944464
Length = 253
Score = 27.9 bits (59), Expect = 8.0
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +3
Query: 465 RRWRSQGFRFH*KIYTQGFHPKGVRDPDVSADGDDGFHRSVPVPPTD 605
RR +GFR F+P G D +S D DD P PPT+
Sbjct: 42 RRAAEEGFRLR-----VAFNPSGNFDLSLSTDQDDAPQVEPPPPPTE 83
>05_05_0033 + 21737075-21737721,21737819-21738134,21738463-21739722
Length = 740
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 445 GYSPVHRNQRRHMQVGSQAEGAHIRP 368
G + H +QRR Q Q +G H+RP
Sbjct: 156 GRAASHESQRRRQQQQQQLKGRHLRP 181
>05_03_0122 -
8669422-8669609,8669759-8670111,8670669-8670824,
8670999-8671168,8672133-8672297,8673190-8673384,
8673506-8673634,8673759-8673980
Length = 525
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 225 RRTVPSGRGVPARWTVPARWTVPTGWRLPARWSLPS 332
R+T PS P+ + +P R GW + W LPS
Sbjct: 28 RKTPPSPPPPPSSFGLPVRAVCLGGWLVTEGWILPS 63
>04_04_1400 -
33259716-33260069,33260172-33260219,33260471-33260596,
33260850-33260900,33260963-33261055,33261217-33261272,
33261465-33261522,33262306-33262365,33262513-33262623,
33263368-33263949,33264026-33264097
Length = 536
Score = 27.9 bits (59), Expect = 8.0
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Frame = +3
Query: 576 HRSVPVPPTDQ----SLGGPKSLHVLGGLHSADSLSHRDGVL 689
H++ P PP DQ SLG S L LH++ S S D +L
Sbjct: 17 HQASPPPPIDQQAAESLGKSPSASDLTALHASSSSSAADALL 58
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,188,090
Number of Sequences: 37544
Number of extensions: 428857
Number of successful extensions: 1446
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1439
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1756684372
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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