Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt7e19
(691 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70753-11|CAA94766.1| 244|Caenorhabditis elegans Hypothetical p... 56 3e-08
Z70753-10|CAD44125.1| 296|Caenorhabditis elegans Hypothetical p... 47 1e-05
Z70753-1|CAD44126.1| 296|Caenorhabditis elegans Hypothetical pr... 47 1e-05
U28740-4|AAA68319.2| 276|Caenorhabditis elegans Temporarily ass... 29 2.4
U23147-2|AAC46688.1| 918|Caenorhabditis elegans Hypothetical pr... 29 3.1
U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical pr... 29 4.1
AF039052-4|AAF98630.1| 981|Caenorhabditis elegans Proteasome re... 29 4.1
AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical ... 28 7.2
Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z83218-3|CAB05688.1| 330|Caenorhabditis elegans Hypothetical pr... 27 9.6
U00065-8|AAL02473.1| 501|Caenorhabditis elegans Hypothetical pr... 27 9.6
U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical pr... 27 9.6
U00065-6|AAL02472.1| 1051|Caenorhabditis elegans Hypothetical pr... 27 9.6
AF039053-9|AAN84838.1| 131|Caenorhabditis elegans Hypothetical ... 27 9.6
AF039053-8|AAC25878.1| 178|Caenorhabditis elegans Hypothetical ... 27 9.6
>Z70753-11|CAA94766.1| 244|Caenorhabditis elegans Hypothetical
protein F40F9.2 protein.
Length = 244
Score = 55.6 bits (128), Expect = 3e-08
Identities = 21/66 (31%), Positives = 41/66 (62%)
Frame = +1
Query: 493 FTEKSIRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVCL 672
F+ +++R AF+RKV+ ++ +T F + + P + WV N +++++A IV +V
Sbjct: 22 FSSQTVRAAFVRKVFMLVTIMFAITAAFCVIPMVSEPFQDWVKNNFWVYFIAIIVFLVVA 81
Query: 673 IAMACC 690
IA++CC
Sbjct: 82 IALSCC 87
>Z70753-10|CAD44125.1| 296|Caenorhabditis elegans Hypothetical
protein F40F9.1a protein.
Length = 296
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/74 (25%), Positives = 41/74 (55%)
Frame = +1
Query: 469 DGEVKGFDFTEKSIRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVA 648
DG+ F F++K++R AF+RKV++++ L + + H T V +N ++ +
Sbjct: 67 DGKYS-FQFSDKTVRAAFVRKVFSLVFIMLCIVAAVTVIPWVHDDTMRMVRRNSALYLGS 125
Query: 649 FIVLIVCLIAMACC 690
+++ V +++ CC
Sbjct: 126 YVIFFVTYLSLVCC 139
>Z70753-1|CAD44126.1| 296|Caenorhabditis elegans Hypothetical
protein F40F9.1b protein.
Length = 296
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/74 (25%), Positives = 41/74 (55%)
Frame = +1
Query: 469 DGEVKGFDFTEKSIRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVA 648
DG+ F F++K++R AF+RKV++++ L + + H T V +N ++ +
Sbjct: 67 DGKYS-FQFSDKTVRAAFVRKVFSLVFIMLCIVAAVTVIPWVHDDTMRMVRRNSALYLGS 125
Query: 649 FIVLIVCLIAMACC 690
+++ V +++ CC
Sbjct: 126 YVIFFVTYLSLVCC 139
>U28740-4|AAA68319.2| 276|Caenorhabditis elegans Temporarily
assigned gene nameprotein 132 protein.
Length = 276
Score = 29.5 bits (63), Expect = 2.4
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +1
Query: 460 VGEDGEVKG-FDFTEKSIRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFM 636
V DG + G + IR AF+RKV I+ QL+ T+G A +Y+ P + Q
Sbjct: 52 VDADGILPGCVGKANRMIRIAFLRKVLGIVGFQLLFTIGICAA-IYNIPNSNQLLQK--H 108
Query: 637 FWVAF 651
W+ F
Sbjct: 109 AWIVF 113
>U23147-2|AAC46688.1| 918|Caenorhabditis elegans Hypothetical
protein C18H9.3 protein.
Length = 918
Score = 29.1 bits (62), Expect = 3.1
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Frame = +2
Query: 254 TRKVDRTRKVDRTHRVEVTRKVELTL-----QEERIPRVEHTRRADMRPLSLASNLHMAA 418
+++V T+ +VE +K E TL +EER +VE + A ++ ASN+ AA
Sbjct: 718 SKEVKHTKTAPWAAKVEAPQKSEKTLLEIQKEEERKFKVEQEKNAKLKAKEQASNITSAA 777
Query: 419 LVTVNRA 439
+ +++
Sbjct: 778 AIAGDKS 784
>U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical protein
F42C5.10 protein.
Length = 1292
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/54 (24%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = -2
Query: 690 TARHRDETDYQHYEGHPEHEGILGHPD-FGRSVVQEQSDETHRHHQLTHQDRVH 532
T++H + +Y G H G + + + G+ V D+ H H+ H H
Sbjct: 896 TSQHSNAQEYSTVHGSQTHRGSVVYDEPHGQVVYDIPHDQEHHHYDTVHVQHHH 949
>AF039052-4|AAF98630.1| 981|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 1 protein.
Length = 981
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 274 GTVHLAGTPRPEGTVRLDSDTCSRNLVGPSSLVFP 170
G V++AGTP P GT + R+L G +S P
Sbjct: 651 GNVNVAGTPAPTGTPAVAPAAPRRDLPGAASAATP 685
>AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical
protein ZK973.9 protein.
Length = 233
Score = 27.9 bits (59), Expect = 7.2
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -2
Query: 591 QEQSDETHRHHQLTHQDRVHLSD 523
Q ++DE +H QL H++ +HLS+
Sbjct: 32 QSRADEAIKHQQLLHRNLLHLSN 54
>Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical
protein H13N06.5 protein.
Length = 462
Score = 27.5 bits (58), Expect = 9.6
Identities = 20/77 (25%), Positives = 27/77 (35%), Gaps = 3/77 (3%)
Frame = -2
Query: 687 ARHRDETDYQHYEGHPEHEGILGHPDFGRSVVQEQSDE---THRHHQLTHQDRVHLSDES 517
A H + H GH G H G S +E+ H HH +H+D H
Sbjct: 74 AAHDHGHAHDHDHGHAHDHGH-AHDHHGHSHDEEEDHHHGHAHDHHGHSHEDHGHSHGAE 132
Query: 516 PAYRFFSEIETLDFAIF 466
A + E + F F
Sbjct: 133 SAKQVGDEYQYTGFLSF 149
>Z83218-3|CAB05688.1| 330|Caenorhabditis elegans Hypothetical
protein C31A11.6 protein.
Length = 330
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +1
Query: 535 YAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVC 669
Y I MC + V M F+ RPT V +F+ +F++LI+C
Sbjct: 96 YFIPMC-VSVLMTMNRFFIVIRPTDQRVFGQRRIFFYSFLILILC 139
>U00065-8|AAL02473.1| 501|Caenorhabditis elegans Hypothetical
protein D1044.2b protein.
Length = 501
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +1
Query: 628 PFMFWVAFIVLIVCLIAMACC 690
P M +A++V++VC+ A+ CC
Sbjct: 412 PVMIILAWLVILVCIGAVVCC 432
>U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical protein
D1044.2c protein.
Length = 1090
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +1
Query: 628 PFMFWVAFIVLIVCLIAMACC 690
P M +A++V++VC+ A+ CC
Sbjct: 962 PVMIILAWLVILVCIGAVVCC 982
>U00065-6|AAL02472.1| 1051|Caenorhabditis elegans Hypothetical protein
D1044.2a protein.
Length = 1051
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +1
Query: 628 PFMFWVAFIVLIVCLIAMACC 690
P M +A++V++VC+ A+ CC
Sbjct: 962 PVMIILAWLVILVCIGAVVCC 982
>AF039053-9|AAN84838.1| 131|Caenorhabditis elegans Hypothetical
protein C45H4.14b protein.
Length = 131
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/75 (18%), Positives = 35/75 (46%)
Frame = +2
Query: 257 RKVDRTRKVDRTHRVEVTRKVELTLQEERIPRVEHTRRADMRPLSLASNLHMAALVTVNR 436
+K+D +K + HR + R+ + +E+ + + + + + L ++ R
Sbjct: 19 KKLDEKKKTEEKHRAKQERQAQKKGAKEQAKKEKAELKKEAKELLKKEKAEERKKESLKR 78
Query: 437 AISHRTTQSAKMAKS 481
+S ++ +AK AK+
Sbjct: 79 KLSEKSEPAAKKAKA 93
>AF039053-8|AAC25878.1| 178|Caenorhabditis elegans Hypothetical
protein C45H4.14a protein.
Length = 178
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/75 (18%), Positives = 35/75 (46%)
Frame = +2
Query: 257 RKVDRTRKVDRTHRVEVTRKVELTLQEERIPRVEHTRRADMRPLSLASNLHMAALVTVNR 436
+K+D +K + HR + R+ + +E+ + + + + + L ++ R
Sbjct: 66 KKLDEKKKTEEKHRAKQERQAQKKGAKEQAKKEKAELKKEAKELLKKEKAEERKKESLKR 125
Query: 437 AISHRTTQSAKMAKS 481
+S ++ +AK AK+
Sbjct: 126 KLSEKSEPAAKKAKA 140
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,098,292
Number of Sequences: 27780
Number of extensions: 348489
Number of successful extensions: 1215
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1211
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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