Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt7e18
         (680 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75711-2|CAB00033.2|  425|Caenorhabditis elegans Hypothetical pr...    58   8e-09
Z46381-9|CAI58660.1|  807|Caenorhabditis elegans Hypothetical pr...    31   0.76 
Z46381-8|CAA86517.2|  808|Caenorhabditis elegans Hypothetical pr...    31   0.76 
Z81061-1|CAB02934.3|  436|Caenorhabditis elegans Hypothetical pr...    29   2.3  
Z75526-4|CAA99770.1|  360|Caenorhabditis elegans Hypothetical pr...    29   3.1  
EF409995-1|ABN58742.1|  410|Caenorhabditis elegans reduced folat...    29   3.1  
Z99102-2|CAB11775.1|  499|Caenorhabditis elegans Hypothetical pr...    28   5.4  
Z70754-9|CAA94777.2|   70|Caenorhabditis elegans Hypothetical pr...    28   5.4  
AC006713-1|AAK68407.2|  310|Caenorhabditis elegans Hypothetical ...    28   5.4  
U41106-2|AAA82410.1|  797|Caenorhabditis elegans Hypothetical pr...    28   7.1  
Z82261-5|CAH60756.1|  304|Caenorhabditis elegans Hypothetical pr...    27   9.4  
Z82085-2|CAB04982.1|  247|Caenorhabditis elegans Hypothetical pr...    27   9.4  

>Z75711-2|CAB00033.2|  425|Caenorhabditis elegans Hypothetical
           protein K02B12.3 protein.
          Length = 425

 Score = 57.6 bits (133), Expect = 8e-09
 Identities = 34/97 (35%), Positives = 55/97 (56%), Gaps = 8/97 (8%)
 Frame = +3

Query: 204 LLAKVDFPLYTLQTLTNRHVIVAGGGGASNTGVANGFE--IFEL--SHNGKRFVAEEVMR 371
           L+ +   P Y L+T+ +RH++VAGGGGAS TGV N  +  +F    ++    F ++ V +
Sbjct: 14  LIGESGIPAYCLKTIGSRHILVAGGGGASKTGVLNEIQTHLFTTGSANQDVGFQSKCVGK 73

Query: 372 HETGP----NVVMTCSVRSIQNRTYLTAGQESHCQLY 470
            +TG     N+ + C+   I  +  + AGQE+ C LY
Sbjct: 74  FDTGSMATMNMDVACAFDEISAKYVIAAGQENLCALY 110


>Z46381-9|CAI58660.1|  807|Caenorhabditis elegans Hypothetical
           protein M01F1.4b protein.
          Length = 807

 Score = 31.1 bits (67), Expect = 0.76
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = -2

Query: 646 LSQGLISNDILFSVLLTLFFFDILSFSETVRLLRLTS 536
           LS  ++   + FS + ++FFF      ETV L+RLTS
Sbjct: 396 LSSVIVMALLAFSAIFSVFFFGFQLHGETVHLVRLTS 432


>Z46381-8|CAA86517.2|  808|Caenorhabditis elegans Hypothetical
           protein M01F1.4a protein.
          Length = 808

 Score = 31.1 bits (67), Expect = 0.76
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = -2

Query: 646 LSQGLISNDILFSVLLTLFFFDILSFSETVRLLRLTS 536
           LS  ++   + FS + ++FFF      ETV L+RLTS
Sbjct: 397 LSSVIVMALLAFSAIFSVFFFGFQLHGETVHLVRLTS 433


>Z81061-1|CAB02934.3|  436|Caenorhabditis elegans Hypothetical
           protein F14H8.1 protein.
          Length = 436

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +3

Query: 315 EIFELSHNGKRFVAEEVMRH 374
           E FEL  NG RF+AE+V  H
Sbjct: 127 ETFELERNGVRFLAEQVSHH 146


>Z75526-4|CAA99770.1|  360|Caenorhabditis elegans Hypothetical
           protein C06H2.4 protein.
          Length = 360

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 19/70 (27%), Positives = 31/70 (44%)
 Frame = -2

Query: 379 VSWRITSSATNLFPLCDSSNISNPFATPVFDAPPPPATMTCRFVKVWSV*SGKSTLANNP 200
           +SWR T++   L+        + PF TP   +P    T+   + +V+   +    LA  P
Sbjct: 1   MSWRTTTAILCLYGAVKEFRPATPFLTPFLASPEKNITLDELYSQVYPYWTYSYMLALIP 60

Query: 199 SDL*GDILSY 170
             +  DIL Y
Sbjct: 61  MFILTDILRY 70


>EF409995-1|ABN58742.1|  410|Caenorhabditis elegans reduced folate
           carrier protein.
          Length = 410

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 19/70 (27%), Positives = 31/70 (44%)
 Frame = -2

Query: 379 VSWRITSSATNLFPLCDSSNISNPFATPVFDAPPPPATMTCRFVKVWSV*SGKSTLANNP 200
           +SWR T++   L+        + PF TP   +P    T+   + +V+   +    LA  P
Sbjct: 1   MSWRTTTAILCLYGAVKEFRPATPFLTPFLASPEKNITLDELYSQVYPYWTYSYMLALIP 60

Query: 199 SDL*GDILSY 170
             +  DIL Y
Sbjct: 61  MFILTDILRY 70


>Z99102-2|CAB11775.1|  499|Caenorhabditis elegans Hypothetical
           protein B0331.1 protein.
          Length = 499

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = -2

Query: 619 ILFSVLLTLFFFDILSFSETVRLLR 545
           IL  V L L F  +LSF +T+RL+R
Sbjct: 3   ILIPVALALLFVYLLSFYDTIRLMR 27


>Z70754-9|CAA94777.2|   70|Caenorhabditis elegans Hypothetical
           protein F58E6.7 protein.
          Length = 70

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -1

Query: 473 LVQLTVALLSRCEVRPVLDAPYGTRHHDIR 384
           ++ L + L+S  E+RPV+ + Y   HH  R
Sbjct: 12  IILLFIFLISNVELRPVMKSGYSKNHHLFR 41


>AC006713-1|AAK68407.2|  310|Caenorhabditis elegans Hypothetical
           protein Y119D3A.4 protein.
          Length = 310

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 9/28 (32%), Positives = 21/28 (75%)
 Frame = +1

Query: 256 DMSLLLEEEEHRTQVSQMDLKYLNCHIM 339
           D+S++L+E+  R Q+ ++++ Y NC ++
Sbjct: 51  DLSVVLDEDSVRIQLDRIEIIYRNCSLL 78


>U41106-2|AAA82410.1|  797|Caenorhabditis elegans Hypothetical
           protein W06A11.2 protein.
          Length = 797

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 15/51 (29%), Positives = 23/51 (45%)
 Frame = +3

Query: 312 FEIFELSHNGKRFVAEEVMRHETGPNVVMTCSVRSIQNRTYLTAGQESHCQ 464
           +EI +L  +G+ F A E +R         +C +R     +YL    E  CQ
Sbjct: 430 YEIRDLLESGQHFNASEFLRKIINLIETSSCPIRKKHGISYLIELAEHQCQ 480


>Z82261-5|CAH60756.1|  304|Caenorhabditis elegans Hypothetical
           protein C35D6.9a protein.
          Length = 304

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = -2

Query: 613 FSVLLTLFFFDILSFSETVRLLRLTSPFSARKLPRLISA-ASTMRMFTLY 467
           F  +  + FF    FS    +L +   FS RKL  L+S   ST + F L+
Sbjct: 169 FKTIYIVIFFTFNIFSILSAILHVPMYFSVRKLSNLVSVKRSTPQRFILW 218


>Z82085-2|CAB04982.1|  247|Caenorhabditis elegans Hypothetical
           protein ZK218.3 protein.
          Length = 247

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = -2

Query: 394 TTLGPVSWRITSSATNLFPLCDSSNISNPFATPVFDAPPPPATMTCRFVKVWS 236
           TT+ PV +  T  ATN       S  ++ +A    +  P P T T R +K ++
Sbjct: 33  TTVDPVDFVYTPGATNCVNAYADSTCASLYAITTDEPAPVPGTSTPRPLKCFT 85


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,135,705
Number of Sequences: 27780
Number of extensions: 320311
Number of successful extensions: 1124
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1122
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)