Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt7e17
(618 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory recept... 26 0.22
AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory recept... 26 0.22
AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory recept... 26 0.22
AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory recept... 25 0.51
AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory recept... 25 0.51
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 23 1.6
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 23 2.1
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 23 2.1
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 23 2.1
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 23 2.1
AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory recept... 23 2.1
AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory recept... 23 2.1
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 23 2.7
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 23 2.7
>AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory receptor
candidate 30 protein.
Length = 394
Score = 26.2 bits (55), Expect = 0.22
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +2
Query: 47 FIFTLNNIFVTAKKSEFAYKFTKI 118
FI+ N++FV + AY+FT++
Sbjct: 225 FIWVFNDVFVMLLSTALAYRFTQV 248
>AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory receptor
candidate 29 protein.
Length = 429
Score = 26.2 bits (55), Expect = 0.22
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +2
Query: 47 FIFTLNNIFVTAKKSEFAYKFTKI 118
FI+ N++FV + AY+FT++
Sbjct: 225 FIWVFNDVFVMLLSTALAYRFTQV 248
>AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory receptor
candidate 7 protein.
Length = 429
Score = 26.2 bits (55), Expect = 0.22
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +2
Query: 47 FIFTLNNIFVTAKKSEFAYKFTKI 118
FI+ N++FV + AY+FT++
Sbjct: 225 FIWVFNDVFVMLLSTALAYRFTQV 248
>AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory receptor
candidate 9 protein.
Length = 408
Score = 25.0 bits (52), Expect = 0.51
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 41 VHFIFTLNNIFVTAKKSEFAYKFTKI 118
+ FI+T N++FV + AY+F +I
Sbjct: 221 ITFIWTYNDLFVMLISTALAYRFGQI 246
>AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory receptor
candidate 2 protein.
Length = 587
Score = 25.0 bits (52), Expect = 0.51
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 41 VHFIFTLNNIFVTAKKSEFAYKFTKI 118
+ FI+T N++FV + AY+F +I
Sbjct: 221 ITFIWTYNDLFVMLISTALAYRFGQI 246
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 23.4 bits (48), Expect = 1.6
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -1
Query: 528 YYFHSCHKLPHFHLPFECLLV 466
YYF+S + HL F C+L+
Sbjct: 213 YYFYSAFIIFTIHLLFYCVLI 233
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 23.0 bits (47), Expect = 2.1
Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Frame = -2
Query: 425 NISSFISCG--SDRDIFSFEYATISFFYCFLCT 333
++ F+ G SD D S E + F C LCT
Sbjct: 1091 SLLGFLQSGGTSDDDEGSIEISLAGLFKCMLCT 1123
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 23.0 bits (47), Expect = 2.1
Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Frame = -2
Query: 425 NISSFISCG--SDRDIFSFEYATISFFYCFLCT 333
++ F+ G SD D S E + F C LCT
Sbjct: 1091 SLLGFLQSGGTSDDDEGSIEISLAGLFKCMLCT 1123
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 23.0 bits (47), Expect = 2.1
Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Frame = -2
Query: 425 NISSFISCG--SDRDIFSFEYATISFFYCFLCT 333
++ F+ G SD D S E + F C LCT
Sbjct: 1091 SLLGFLQSGGTSDDDEGSIEISLAGLFKCMLCT 1123
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 23.0 bits (47), Expect = 2.1
Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Frame = -2
Query: 425 NISSFISCG--SDRDIFSFEYATISFFYCFLCT 333
++ F+ G SD D S E + F C LCT
Sbjct: 1091 SLLGFLQSGGTSDDDEGSIEISLAGLFKCMLCT 1123
>AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory receptor
candidate 39 protein.
Length = 427
Score = 23.0 bits (47), Expect = 2.1
Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = +2
Query: 5 RHTARY-KHTCTYVHFIFTLNNIFVTAKKSEFAY 103
R T R+ T Y +FIF IFVT E Y
Sbjct: 75 RTTFRWLSSTSIYAYFIFGAETIFVTMVFKERLY 108
>AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory receptor
candidate 10 protein.
Length = 437
Score = 23.0 bits (47), Expect = 2.1
Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = +2
Query: 5 RHTARY-KHTCTYVHFIFTLNNIFVTAKKSEFAY 103
R T R+ T Y +FIF IFVT E Y
Sbjct: 75 RTTFRWLSSTSIYAYFIFGAETIFVTMVFKERLY 108
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 22.6 bits (46), Expect = 2.7
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -3
Query: 382 FPLNTLPLAFFIASCALDSS 323
F N LP+A FI CA SS
Sbjct: 920 FYWNLLPIAVFILVCATCSS 939
Score = 21.8 bits (44), Expect = 4.7
Identities = 7/30 (23%), Positives = 14/30 (46%)
Frame = -2
Query: 422 ISSFISCGSDRDIFSFEYATISFFYCFLCT 333
+ +F+ + D E++ F C +CT
Sbjct: 1062 VLTFLGANAQDDEGGLEFSVNKLFKCMICT 1091
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 22.6 bits (46), Expect = 2.7
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -3
Query: 382 FPLNTLPLAFFIASCALDSS 323
F N LP+A FI CA SS
Sbjct: 920 FYWNLLPIAVFILVCATCSS 939
Score = 21.8 bits (44), Expect = 4.7
Identities = 7/30 (23%), Positives = 14/30 (46%)
Frame = -2
Query: 422 ISSFISCGSDRDIFSFEYATISFFYCFLCT 333
+ +F+ + D E++ F C +CT
Sbjct: 1062 VLTFLGANAQDDEGGLEFSVNKLFKCMICT 1091
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,088
Number of Sequences: 336
Number of extensions: 3273
Number of successful extensions: 19
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -