Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt7e14
(547 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1323 + 32644956-32645096,32645488-32646126,32646701-326469... 30 1.0
04_03_0588 + 17595299-17596151,17597519-17597665,17598562-175988... 30 1.0
05_05_0070 + 22148595-22148907,22148988-22149104,22149196-221493... 28 4.2
01_06_1346 - 36478844-36479266,36479369-36479728,36479820-364801... 28 4.2
07_03_0944 + 22787933-22789906 27 7.4
05_01_0212 + 1601861-1603600 27 7.4
03_05_0799 + 27809301-27811550 27 7.4
01_05_0473 - 22549178-22549532,22549612-22550576 27 7.4
12_01_0079 + 644754-645932,645966-646061,646193-647122 27 9.8
11_01_0078 + 609005-610183,610217-610312,610444-611373 27 9.8
06_03_1445 - 30209354-30209396,30209798-30209875,30210220-302102... 27 9.8
06_03_1433 - 30129184-30129226,30129628-30129705,30130050-301301... 27 9.8
06_03_1416 + 30027066-30027663,30027739-30027848,30027927-300280... 27 9.8
01_07_0251 + 42289617-42291241,42291424-42292156 27 9.8
01_06_0030 + 25756294-25756575,25756977-25757101,25757276-257573... 27 9.8
>04_04_1323 +
32644956-32645096,32645488-32646126,32646701-32646907,
32647020-32647100,32647686-32648566,32648641-32648932,
32649657-32650673,32651334-32651605,32651992-32652493
Length = 1343
Score = 30.3 bits (65), Expect = 1.0
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +1
Query: 349 YVVIGSVAIFMLY-FCVLREESDIDREFDKTLYDRIKGLEKEQL 477
Y+ IG + + ++ C L + + D +FD Y IKG+EK++L
Sbjct: 289 YINIGRLPVMVMSNLCWLHKLKESDCQFDSGGYFLIKGMEKDEL 332
>04_03_0588 +
17595299-17596151,17597519-17597665,17598562-17598837,
17599108-17599805
Length = 657
Score = 30.3 bits (65), Expect = 1.0
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1
Query: 388 FCVLREESDIDREFDKTLYDRIKGLEKEQLLQSYRYNKEHGKSVIEIEE 534
F + ++ SDI R+ K + + KGL EQL+ S + K + +EE
Sbjct: 354 FLIRKQRSDIQRQLRKKYFQKNKGLLLEQLISSDERASDSTK-IFSLEE 401
>05_05_0070 +
22148595-22148907,22148988-22149104,22149196-22149350,
22149987-22150061,22150179-22150469,22150942-22151292,
22151390-22151794
Length = 568
Score = 28.3 bits (60), Expect = 4.2
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 439 LYDRIKGLEKEQLLQS-YRYNKEHGKSVIEIEERLLE 546
L R GL + L S +YNK+ GKS++E R+LE
Sbjct: 413 LKQRFPGLTQTSLDTSKIQYNKDVGKSILESYSRVLE 449
>01_06_1346 -
36478844-36479266,36479369-36479728,36479820-36480110,
36480193-36480267,36482292-36482446,36482549-36482665,
36482757-36482976
Length = 546
Score = 28.3 bits (60), Expect = 4.2
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 439 LYDRIKGLEKEQL-LQSYRYNKEHGKSVIEIEERLLE 546
L R GL + L + +YN++ GKS++E R+LE
Sbjct: 385 LKQRFPGLTQTSLDMSKIQYNRDVGKSILESYSRVLE 421
>07_03_0944 + 22787933-22789906
Length = 657
Score = 27.5 bits (58), Expect = 7.4
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -3
Query: 509 PCSLLYLYDWRSCSFSKP 456
PCS Y +DW C F P
Sbjct: 244 PCSRAYSHDWTECPFVHP 261
>05_01_0212 + 1601861-1603600
Length = 579
Score = 27.5 bits (58), Expect = 7.4
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -3
Query: 509 PCSLLYLYDWRSCSFSKP 456
PCS Y +DW C F P
Sbjct: 200 PCSRAYSHDWTECPFVHP 217
>03_05_0799 + 27809301-27811550
Length = 749
Score = 27.5 bits (58), Expect = 7.4
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -3
Query: 509 PCSLLYLYDWRSCSFSKP 456
PCS Y +DW C F P
Sbjct: 276 PCSRAYSHDWTECPFVHP 293
>01_05_0473 - 22549178-22549532,22549612-22550576
Length = 439
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +1
Query: 217 IRFKSSNVEINENEPVKFSTSR--AASRGPVPLISKINDDM 333
+RFKS ++ EN+ F TS A+S + ++ +NDD+
Sbjct: 202 VRFKSDDLNNEENQESFFKTSELVASSTMSLVVVELVNDDI 242
>12_01_0079 + 644754-645932,645966-646061,646193-647122
Length = 734
Score = 27.1 bits (57), Expect = 9.8
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 403 EESDIDREFDKTLYDRIKGLEKEQLLQSYRYNKEHGKSVIEIEERL 540
EES +++ K R+ LEKE L + R +E ++E RL
Sbjct: 207 EESRVEKAKRKAEEKRLARLEKEMLEEEERKQREEMAKLVEERRRL 252
>11_01_0078 + 609005-610183,610217-610312,610444-611373
Length = 734
Score = 27.1 bits (57), Expect = 9.8
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 403 EESDIDREFDKTLYDRIKGLEKEQLLQSYRYNKEHGKSVIEIEERL 540
EES +++ K R+ LEKE L + R +E ++E RL
Sbjct: 207 EESRVEKAKRKAEEKRLARLEKEMLEEEERKQREEMAKLVEERRRL 252
>06_03_1445 - 30209354-30209396,30209798-30209875,30210220-30210285,
30212275-30212322,30212408-30212571,30212726-30213581,
30213673-30213786,30213853-30213996,30214075-30214304,
30214584-30214724,30214810-30214887,30214972-30215053,
30215130-30215184,30215284-30215407,30215548-30215641,
30215718-30215794,30215873-30215982,30216058-30216655
Length = 1033
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = +1
Query: 391 CVLREESDIDREFDKTLYDRIKGLEKEQLLQSY 489
C++ + D +DK +YDR+ G +++L++Y
Sbjct: 933 CLILHKDDYHHMYDKDIYDRVLGW-IDEILENY 964
>06_03_1433 - 30129184-30129226,30129628-30129705,30130050-30130115,
30132105-30132152,30132238-30132401,30132556-30133411,
30133503-30133616,30133683-30133826,30133905-30134134,
30134414-30134554,30134640-30134717,30134802-30134883,
30134958-30135012,30135112-30135235,30135376-30135469,
30135546-30135622,30135701-30135810,30135886-30136483
Length = 1033
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = +1
Query: 391 CVLREESDIDREFDKTLYDRIKGLEKEQLLQSY 489
C++ + D +DK +YDR+ G +++L++Y
Sbjct: 933 CLILHKDDYHHMYDKDIYDRVLGW-IDEILENY 964
>06_03_1416 + 30027066-30027663,30027739-30027848,30027927-30028003,
30028080-30028173,30028314-30028437,30028537-30028591,
30028666-30028747,30028832-30028909,30028995-30029135,
30029416-30029645,30029724-30029867,30029934-30030047,
30030139-30030994,30031149-30031312,30031398-30031445,
30033435-30033500,30033845-30033922,30034324-30034366
Length = 1033
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = +1
Query: 391 CVLREESDIDREFDKTLYDRIKGLEKEQLLQSY 489
C++ + D +DK +YDR+ G +++L++Y
Sbjct: 933 CLILHKDDYHHMYDKDIYDRVLGW-IDEILENY 964
>01_07_0251 + 42289617-42291241,42291424-42292156
Length = 785
Score = 27.1 bits (57), Expect = 9.8
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +1
Query: 166 KMLRNLNYLRHCFRVSGIRFKSSNVEINENEPVKFSTSRAAS 291
++++NL R C + KS N EI +P++F R S
Sbjct: 737 RVMKNLRVCRDCHSTMKLISKSENREIILRDPIRFHHFRDGS 778
>01_06_0030 +
25756294-25756575,25756977-25757101,25757276-25757313,
25757501-25757611,25757703-25757782,25758264-25758318,
25758465-25758851,25759080-25759223,25759630-25759671,
25759755-25759837
Length = 448
Score = 27.1 bits (57), Expect = 9.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 460 LEKEQLLQSYRYNKEHGKSVIE 525
L+ E +LQ+ Y KEHGK + E
Sbjct: 394 LQVEMILQALEYEKEHGKVLDE 415
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,650,153
Number of Sequences: 37544
Number of extensions: 201435
Number of successful extensions: 440
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 440
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1222086348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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