Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt7e13
         (693 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    25   0.44 
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    24   1.4  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          24   1.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.5  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   7.2  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   7.2  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   7.2  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   9.6  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 25.4 bits (53), Expect = 0.44
 Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
 Frame = +1

Query: 382 MPHRC--RHKRKFPNLRSTPYLLPKT*RNCRACYC 480
           +P +C    +  FP  R  P+L+P    +C  C C
Sbjct: 745 VPQKCIFNGQAYFPGSRFHPFLIPTGFDSCTVCTC 779


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = +3

Query: 240 NFCALPEGCQAQYLRNPVSNHGYVRPGMDQFDNTKTELRHSFNITTLN 383
           N  A P+ CQ  Y + P S+   V+    Q+D   TE  + FN    N
Sbjct: 168 NNSASPKACQFLYNQFPGSSQVVVKDETCQYD---TESSYQFNDPQFN 212


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = +3

Query: 240 NFCALPEGCQAQYLRNPVSNHGYVRPGMDQFDNTKTELRHSFNITTLN 383
           N  A P+ CQ  Y + P S+   V+    Q+D   TE  + FN    N
Sbjct: 188 NNSASPKACQFLYNQFPGSSQVVVKDETCQYD---TESSYQFNDPQFN 232


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -2

Query: 644 MYHITLAARTLVFRWDRRVVQQT 576
           + HITL A  ++   D+RVV +T
Sbjct: 3   LLHITLCAFLILTPTDQRVVTRT 25



 Score = 21.8 bits (44), Expect = 5.5
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 585  YYPPVPPEDEGP 620
            ++PP+PP  E P
Sbjct: 1374 WHPPIPPTSEKP 1385


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 561 NPSIMRLLYYPPVPPEDEGPCC 626
           N +I++ L     P E  GPCC
Sbjct: 316 NHAIVQSLVNSMKPKEVPGPCC 337


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +2

Query: 395 AGTRGSSRIYEARRTSCPRPDETVARATASS 487
           A  +GS    E +    PRP  T  RAT  S
Sbjct: 709 AFAQGSDAAVECKADGFPRPVVTWKRATGVS 739


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = +3

Query: 288 PVSNHGYVRPGMDQFDNTKTELRHSFNITTLNAASMP 398
           PVS   ++      +   +T  +H FN    NA + P
Sbjct: 20  PVSKSAFIELQQHGYGPLRTSYQHHFNSPAGNAHTGP 56


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +1

Query: 265 VKRNIFVTLSATMAMFVL 318
           V RN+F +L ATM  +++
Sbjct: 392 VNRNLFKSLLATMVTYLV 409


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,516
Number of Sequences: 336
Number of extensions: 3953
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)