Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt7e10
(702 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom... 80 3e-16
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 79 6e-16
SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces p... 77 2e-15
SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces pom... 77 3e-15
SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1 type|Schizosaccharom... 72 9e-14
SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces... 71 1e-13
SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr 2... 71 2e-13
SPCC63.13 |||DNAJ domain protein|Schizosaccharomyces pombe|chr 3... 68 2e-12
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 68 2e-12
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 67 3e-12
SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces ... 62 7e-11
SPBC1773.09c |mug184||meiotically upregulated gene Mug184|Schizo... 60 3e-10
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 60 3e-10
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 60 4e-10
SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein Cwf23|Schiz... 59 5e-10
SPAC1071.09c |||DNAJ domain protein, DNAJC9 family|Schizosacchar... 54 1e-08
SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyc... 50 3e-07
SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit ... 50 3e-07
SPAC926.05c |||diphthamide biosynthesis protein Dph4 |Schizosacc... 45 9e-06
SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces pom... 45 1e-05
SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces pomb... 42 9e-05
SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyc... 41 1e-04
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 26 4.5
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 26 4.5
SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharom... 26 6.0
SPAC22E12.02 |||RNA-binding protein|Schizosaccharomyces pombe|ch... 26 6.0
SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|c... 26 6.0
SPCC569.05c |||spermidine family transporter |Schizosaccharomyce... 25 7.9
SPBC83.16c |||conserved fungal protein|Schizosaccharomyces pombe... 25 7.9
>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 80.2 bits (189), Expect = 3e-16
Identities = 45/100 (45%), Positives = 61/100 (61%)
Frame = +2
Query: 248 EILNIVKEASASEIKKAYRRLALQWHPDKNLENLQEAKEQFQLVQNAYEVLSDPQERAWY 427
+IL + K+AS SEI+KAYR+L QWHPDKN N +EA+E+F + A+EVLSDP++R Y
Sbjct: 10 QILGVSKDASESEIRKAYRQLTKQWHPDKNPGN-EEAQEKFIEINKAHEVLSDPEQRKIY 68
Query: 428 DNHREQLLRGAGSSYNDDSLDVYPYFSPSCYKGFGDDPQG 547
D + E+ L G + +P GFG DP G
Sbjct: 69 DAYGEEGLNGQPGGPGGGPGEGFP------GGGFGFDPFG 102
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 79.0 bits (186), Expect = 6e-16
Identities = 48/110 (43%), Positives = 64/110 (58%), Gaps = 1/110 (0%)
Frame = +2
Query: 230 KMKCHYEILNIVKEASASEIKKAYRRLALQWHPDKNLENLQEAKEQFQLVQNAYEVLSDP 409
K K HY+IL + KEA+ EIKKAYR+LAL +HPDKN NL EA+ +F+ V AY +LSDP
Sbjct: 346 KRKDHYKILGVSKEATDIEIKKAYRKLALVYHPDKNAGNL-EAEARFKEVGEAYTILSDP 404
Query: 410 QERAWYDNHREQLLRGAGSSYNDDSLDVY-PYFSPSCYKGFGDDPQGFYG 556
+ R +D+ + L G D D+ Y + + G G GF G
Sbjct: 405 ESRRRFDSGVD-LEPGMEGGAGMDPFDILRAYQAGGSFPGGGFPGGGFPG 453
>SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 77.4 bits (182), Expect = 2e-15
Identities = 35/63 (55%), Positives = 47/63 (74%)
Frame = +2
Query: 242 HYEILNIVKEASASEIKKAYRRLALQWHPDKNLENLQEAKEQFQLVQNAYEVLSDPQERA 421
+Y+ILNI +A IKK+YRRLA+ +HPDKN EN + A+E+FQ + AY+VLSDP+ R
Sbjct: 10 YYDILNISVDADGDTIKKSYRRLAILYHPDKNRENPEAAREKFQKLAEAYQVLSDPKLRE 69
Query: 422 WYD 430
YD
Sbjct: 70 KYD 72
>SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 76.6 bits (180), Expect = 3e-15
Identities = 37/87 (42%), Positives = 58/87 (66%)
Frame = +2
Query: 245 YEILNIVKEASASEIKKAYRRLALQWHPDKNLENLQEAKEQFQLVQNAYEVLSDPQERAW 424
YE+LN+ AS +E+KKAYR+LAL++HPDKN A ++F+ + AYE+L+D ++RA
Sbjct: 8 YEVLNVDVTASQAELKKAYRKLALKYHPDKN----PNAGDKFKEISRAYEILADEEKRAT 63
Query: 425 YDNHREQLLRGAGSSYNDDSLDVYPYF 505
YD E+ L+G G+ + D++ F
Sbjct: 64 YDRFGEEGLQGGGADGGMSADDLFASF 90
>SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 71.7 bits (168), Expect = 9e-14
Identities = 31/63 (49%), Positives = 48/63 (76%)
Frame = +2
Query: 242 HYEILNIVKEASASEIKKAYRRLALQWHPDKNLENLQEAKEQFQLVQNAYEVLSDPQERA 421
+Y++L I +A+A +IKKAYR+LA+++HPDKN ++ Q A E+FQ + AY+VL D + R+
Sbjct: 9 YYDLLGISTDATAVDIKKAYRKLAVKYHPDKNPDDPQGASEKFQKISEAYQVLGDEKLRS 68
Query: 422 WYD 430
YD
Sbjct: 69 QYD 71
>SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 403
Score = 71.3 bits (167), Expect = 1e-13
Identities = 44/99 (44%), Positives = 61/99 (61%), Gaps = 5/99 (5%)
Frame = +2
Query: 227 IKMKCH--YEILNIVKEASASEIKKAYRRLALQWHPDKNLENLQEAKEQFQLVQNAYEVL 400
IK K H YEIL++ K + +EIKK+Y++LALQ HPDKN + A E F++V A++VL
Sbjct: 107 IKYKNHQYYEILDLKKTCTDTEIKKSYKKLALQLHPDKN--HAPSADEAFKMVSKAFQVL 164
Query: 401 SDPQERAWYDN---HREQLLRGAGSSYNDDSLDVYPYFS 508
SDP RA YD E A SS++ ++ +P FS
Sbjct: 165 SDPNLRAHYDRTGMDPESRASAASSSFSSNA-GGHPGFS 202
>SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 413
Score = 70.5 bits (165), Expect = 2e-13
Identities = 34/63 (53%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Frame = +2
Query: 245 YEILNIVKEASASEIKKAYRRLALQWHPDK-NLENLQEAKEQFQLVQNAYEVLSDPQERA 421
Y+IL + EASA EIKK+Y+RLAL HPDK + +EA E+F+ VQ AY++L DP+ R
Sbjct: 8 YDILEVHFEASAEEIKKSYKRLALLHHPDKAPIHEKEEAAERFRGVQEAYDILKDPESRE 67
Query: 422 WYD 430
YD
Sbjct: 68 MYD 70
>SPCC63.13 |||DNAJ domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 208
Score = 67.7 bits (158), Expect = 2e-12
Identities = 36/66 (54%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Frame = +2
Query: 236 KCHYEILNIVKEASASEIKKAYRRLALQWHPDKNLENLQ-EAKEQFQLVQNAYEVLSDPQ 412
K +Y ILNI +ASA EIK AY++ AL+ HPD+ + + A EQFQLV AY VLSD
Sbjct: 3 KDYYAILNITPKASAEEIKYAYKKAALETHPDRVSPSARARATEQFQLVNEAYYVLSDNS 62
Query: 413 ERAWYD 430
RA YD
Sbjct: 63 RRAQYD 68
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 67.7 bits (158), Expect = 2e-12
Identities = 32/64 (50%), Positives = 45/64 (70%)
Frame = +2
Query: 245 YEILNIVKEASASEIKKAYRRLALQWHPDKNLENLQEAKEQFQLVQNAYEVLSDPQERAW 424
Y+ L + EAS +E+KKAYR+LAL++HPDKN +++F+ + AYEVLSDPQ R
Sbjct: 8 YDCLEVRPEASEAELKKAYRKLALKYHPDKN----PNGEKKFKEISLAYEVLSDPQRRKL 63
Query: 425 YDNH 436
YD +
Sbjct: 64 YDQY 67
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 66.9 bits (156), Expect = 3e-12
Identities = 31/71 (43%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Frame = +2
Query: 245 YEILNIVKEASASEIKKAYRRLALQWHPDKNLENLQEA-KEQFQLVQNAYEVLSDPQERA 421
Y L + K+A++ +IK++Y RL+ +HPD++ + + A +E+FQ++Q+AYEVLSDP ++
Sbjct: 10 YLALGLPKDATSDQIKESYYRLSRLFHPDRHTADQKAAAEEKFQIIQHAYEVLSDPSKKE 69
Query: 422 WYDNHREQLLR 454
YDN EQ L+
Sbjct: 70 IYDNFGEQGLK 80
>SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 528
Score = 62.1 bits (144), Expect = 7e-11
Identities = 29/64 (45%), Positives = 45/64 (70%)
Frame = +2
Query: 245 YEILNIVKEASASEIKKAYRRLALQWHPDKNLENLQEAKEQFQLVQNAYEVLSDPQERAW 424
Y+ L + K ASASEIK AY +LA Q+HPD N + + A+++F ++ AYEVL DP+++
Sbjct: 88 YKTLGVSKSASASEIKSAYYKLAKQYHPDANPD--KAAQDKFVEIKQAYEVLQDPKKKKA 145
Query: 425 YDNH 436
+D +
Sbjct: 146 FDTY 149
>SPBC1773.09c |mug184||meiotically upregulated gene
Mug184|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 60.1 bits (139), Expect = 3e-10
Identities = 29/63 (46%), Positives = 43/63 (68%)
Frame = +2
Query: 242 HYEILNIVKEASASEIKKAYRRLALQWHPDKNLENLQEAKEQFQLVQNAYEVLSDPQERA 421
+Y IL + K A+ +I+K Y LALQ+HPD+N + + A ++FQ +Q A+EVLSD +R
Sbjct: 13 YYAILKLQKNATFQQIRKQYLFLALQYHPDRNPGDEERAVKRFQRLQLAHEVLSDATKRL 72
Query: 422 WYD 430
YD
Sbjct: 73 IYD 75
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 60.1 bits (139), Expect = 3e-10
Identities = 33/85 (38%), Positives = 48/85 (56%)
Frame = +2
Query: 233 MKCHYEILNIVKEASASEIKKAYRRLALQWHPDKNLENLQEAKEQFQLVQNAYEVLSDPQ 412
M C YEIL + ++ EIK YR+LALQ+HPD+N +++ E F + AY +LS+
Sbjct: 8 MDC-YEILQVNHDSDLQEIKANYRKLALQYHPDRN-PGIEDYNEIFSQINAAYNILSNDD 65
Query: 413 ERAWYDNHREQLLRGAGSSYNDDSL 487
+R W H + LR S +D L
Sbjct: 66 KRKW---HEKDYLRNQYSVQIEDVL 87
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 59.7 bits (138), Expect = 4e-10
Identities = 28/66 (42%), Positives = 40/66 (60%)
Frame = +2
Query: 242 HYEILNIVKEASASEIKKAYRRLALQWHPDKNLENLQEAKEQFQLVQNAYEVLSDPQERA 421
+Y IL +S EI++ Y +L L++HPD+N E QFQL+Q A+EVL DP+ R
Sbjct: 13 YYTILGAESTSSYVEIRQQYLKLVLRYHPDRNPGREAEVLPQFQLIQKAHEVLKDPKLRE 72
Query: 422 WYDNHR 439
+D R
Sbjct: 73 LFDQRR 78
>SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein
Cwf23|Schizosaccharomyces pombe|chr 3|||Manual
Length = 289
Score = 59.3 bits (137), Expect = 5e-10
Identities = 29/66 (43%), Positives = 44/66 (66%)
Frame = +2
Query: 242 HYEILNIVKEASASEIKKAYRRLALQWHPDKNLENLQEAKEQFQLVQNAYEVLSDPQERA 421
+YE+L I ++A EI +A+R+ +L++HPDKN N +A E+F ++Q AY L D Q R
Sbjct: 10 YYELLGINEDAQDQEIHRAWRKTSLKYHPDKN-PNDPKAAEKFHMLQLAYNALIDVQLRK 68
Query: 422 WYDNHR 439
YD+ R
Sbjct: 69 AYDSER 74
>SPAC1071.09c |||DNAJ domain protein, DNAJC9
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 282
Score = 54.4 bits (125), Expect = 1e-08
Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Frame = +2
Query: 245 YEILNIVKEASASEIKKAYRRLALQWHPDK--NLENLQEAKEQFQLVQNAYEVLSDPQER 418
Y +L + K+AS I++AYR+ ALQ HPD+ + E EA+ +F V AY VLSD + R
Sbjct: 33 YSVLGVEKDASDELIRRAYRKKALQHHPDRIHDEEKKVEARIEFDKVAIAYGVLSDKKRR 92
Query: 419 AWYD 430
YD
Sbjct: 93 KHYD 96
>SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 442
Score = 50.0 bits (114), Expect = 3e-07
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Frame = +2
Query: 224 EIKMKCHYEILNIVK---EASASEIKKAYRRLALQWHPDKNLENLQEAKEQF-QLVQNAY 391
E K + HY +L + K +A +IKKA+ + L+ HPDK + + F + +Q AY
Sbjct: 92 EWKQQDHYAVLGLSKYRYKADTEQIKKAHLKKVLKHHPDKKAASGNINDDSFFKCIQKAY 151
Query: 392 EVLSDPQERAWYDN 433
E+LSDP R +D+
Sbjct: 152 EILSDPVRRRQFDS 165
>SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit
Sec63 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 50.0 bits (114), Expect = 3e-07
Identities = 24/65 (36%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Frame = +2
Query: 245 YEILNIVKEASASEIKKAYRRLALQWHPDK--NLENL--QEAKEQFQLVQNAYEVLSDPQ 412
YEIL I K S ++++ Y+RL++++HPDK N+ N +E ++ + + NAY L+D +
Sbjct: 100 YEILGIAKGTSVDDVRRHYKRLSIKFHPDKVRNMVNTTREEVEKHYIEITNAYRALTDDK 159
Query: 413 ERAWY 427
R Y
Sbjct: 160 TRENY 164
>SPAC926.05c |||diphthamide biosynthesis protein Dph4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 139
Score = 45.2 bits (102), Expect = 9e-06
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = +2
Query: 242 HYEILNIV--KEASASEIKKAYRRLALQWHPDKNLENLQEAKEQFQLVQNAYEVLSDPQE 415
HY +LN+ K + EIK+AYR+ L +HPDK E V+ AY+VLS ++
Sbjct: 3 HYSVLNLKDGKTYTDDEIKEAYRKALLLFHPDKCKEK-PSVVYTIDQVKEAYQVLSSEKD 61
Query: 416 RAWYDNHREQ 445
R Y +E+
Sbjct: 62 RQQYQIKQEE 71
>SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 303
Score = 44.8 bits (101), Expect = 1e-05
Identities = 22/62 (35%), Positives = 37/62 (59%)
Frame = +2
Query: 245 YEILNIVKEASASEIKKAYRRLALQWHPDKNLENLQEAKEQFQLVQNAYEVLSDPQERAW 424
YE+L + +AS EI +AYR+ ++ +HPDKN ++KE + L+ +L + + R
Sbjct: 42 YELLEVPTKASIKEINRAYRKKSILYHPDKN----PKSKELYTLLGLIVNILRNTETRKR 97
Query: 425 YD 430
YD
Sbjct: 98 YD 99
>SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 209
Score = 41.9 bits (94), Expect = 9e-05
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Frame = +2
Query: 245 YEILNIVKEASASEIKKAYRRLALQWHPDKNLENLQEAKEQFQLVQNAYEVLSDPQER-- 418
Y++L+I+ S +I+ YR+ +L HPDKN +N +A + F +++ A L + + R
Sbjct: 33 YDVLDILPGMSVDDIRNLYRKKSLMIHPDKNRDN-PKAADAFDILKKAESDLVNDKIRES 91
Query: 419 --AWYDNHREQLLRGAGSSYNDDSL 487
+ Y R QLL+ S N + +
Sbjct: 92 LDSAYTAARNQLLKEKKLSPNSEDV 116
>SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 41.1 bits (92), Expect = 1e-04
Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 16/130 (12%)
Frame = +2
Query: 221 NEIKMKCHYEILNIVKEASASEIKKAYRRLALQWHPD--KNLENL----------QEAKE 364
+E+K YEIL + + +A++IK+ Y L + HPD KN L + +E
Sbjct: 26 SELKSLTPYEILELPRTCTANDIKRKYIELVKKHHPDKMKNASQLAPTESPPEINKHNEE 85
Query: 365 QFQLVQNAYEVLSDPQERAWYDN---HREQLLRGAGSSYNDDSLDVYPYFSPSCYK-GFG 532
F+L+ A +LSD + R YD H Q S + S YP +S S G G
Sbjct: 86 YFRLLLAANALLSDKRRREEYDRFGIHWNQPSHPTHPSPQNWSQARYPTYSRSRRSAGMG 145
Query: 533 DDPQGFYGVY 562
+ +Y Y
Sbjct: 146 SWEEYYYNSY 155
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 26.2 bits (55), Expect = 4.5
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
Frame = +2
Query: 344 NLQEAKEQFQLVQNAYEVL---SDPQERAW 424
+L+E K+ FQ+V+N+Y +L + P E W
Sbjct: 969 DLEEKKQAFQMVKNSYLLLFASAKPDEDFW 998
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 26.2 bits (55), Expect = 4.5
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +2
Query: 242 HYEILNIVKEASASEIKKAYRRLALQWHPDKNLENLQEAKEQFQ-LVQNAYEVLSDP 409
H EI N V S+++I++ DK+ EAK Q + + N +S+P
Sbjct: 503 HIEITNSVGHLSSTKIQEMIENADKFKQQDKDFAKKLEAKSQLESYISNIETTISEP 559
>SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1016
Score = 25.8 bits (54), Expect = 6.0
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -3
Query: 106 EEQYELRQQPPFIYTINT*YLISFYFEDF*RKL 8
++ Y R QPP+I ++N+ ++ E+F R+L
Sbjct: 948 DDIYHKRTQPPYIPSLNSPTDTKYFDEEFTREL 980
>SPAC22E12.02 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 25.8 bits (54), Expect = 6.0
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = +2
Query: 392 EVLSDPQERAWYDNHREQLLRGAGSSYNDDSLDVYPYFS--PSCYK 523
+V DP W NH + G+ ND+SL Y FS PS K
Sbjct: 15 QVWEDPTLLEWDPNHFRLFVGNLGNDVNDESL--YQAFSEYPSLVK 58
>SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1687
Score = 25.8 bits (54), Expect = 6.0
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 4/36 (11%)
Frame = +2
Query: 242 HYEIL----NIVKEASASEIKKAYRRLALQWHPDKN 337
H+E+L N++KEAS +E + + L+LQ D +
Sbjct: 550 HHEVLLISLNLIKEASDTEFENEFLDLSLQGFKDNS 585
>SPCC569.05c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 576
Score = 25.4 bits (53), Expect = 7.9
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -3
Query: 298 GFFYLRCAGFFNYVQYFVMTL 236
G F+L +G+++YV + V TL
Sbjct: 459 GIFWLSWSGYYSYVHWIVPTL 479
>SPBC83.16c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 563
Score = 25.4 bits (53), Expect = 7.9
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 464 SSYNDDSLDVYPYFSPSCY 520
SS ND S +Y YF+ +C+
Sbjct: 340 SSLNDSSTALYSYFAAACF 358
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,920,793
Number of Sequences: 5004
Number of extensions: 61919
Number of successful extensions: 234
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 222
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 325165428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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