Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt7e02
(600 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 208 3e-54
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 208 3e-54
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 102 2e-22
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 102 2e-22
AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical... 101 4e-22
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 100 2e-21
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 87 9e-18
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 86 2e-17
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 85 3e-17
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 84 8e-17
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 82 3e-16
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 72 3e-13
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 67 1e-11
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 66 2e-11
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 65 4e-11
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 64 7e-11
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 64 7e-11
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 61 7e-10
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 61 7e-10
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 60 9e-10
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 56 2e-08
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 54 1e-07
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 52 2e-07
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 43 2e-04
Z98877-7|CAB63403.1| 292|Caenorhabditis elegans Hypothetical pr... 31 0.83
AF100307-11|AAC68929.1| 304|Caenorhabditis elegans Hypothetical... 29 2.5
AL032639-9|CAA21633.1| 303|Caenorhabditis elegans Hypothetical ... 28 4.4
Z82059-12|CAB04880.1| 622|Caenorhabditis elegans Hypothetical p... 28 5.9
U20783-1|AAC46845.1| 535|Caenorhabditis elegans unknown protein. 28 5.9
AL032665-2|CAA21772.1| 622|Caenorhabditis elegans Hypothetical ... 28 5.9
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 208 bits (507), Expect = 3e-54
Identities = 91/98 (92%), Positives = 95/98 (96%)
Frame = +3
Query: 306 MALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 485
MALKRI +ELQDLGRDPPAQCSAGP G+DLFHWQATIMGP +SPYQGGVFFLTIHFPTDY
Sbjct: 1 MALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDY 60
Query: 486 PFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALT 599
PFKPPKVAFTTRIYHPNINSNGSICLDILR+QWSPALT
Sbjct: 61 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALT 98
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 208 bits (507), Expect = 3e-54
Identities = 91/98 (92%), Positives = 95/98 (96%)
Frame = +3
Query: 306 MALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 485
MALKRI +ELQDLGRDPPAQCSAGP G+DLFHWQATIMGP +SPYQGGVFFLTIHFPTDY
Sbjct: 1 MALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDY 60
Query: 486 PFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALT 599
PFKPPKVAFTTRIYHPNINSNGSICLDILR+QWSPALT
Sbjct: 61 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALT 98
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 102 bits (245), Expect = 2e-22
Identities = 40/92 (43%), Positives = 64/92 (69%)
Frame = +3
Query: 315 KRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFK 494
+R+ R+ + L DPPA S P +++ W+A I GP ++P++ G F L++ F +YP K
Sbjct: 7 RRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNK 66
Query: 495 PPKVAFTTRIYHPNINSNGSICLDILRAQWSP 590
PP V F ++++HPN+ ++GSICLDIL+ +WSP
Sbjct: 67 PPTVKFISKMFHPNVYADGSICLDILQNRWSP 98
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 102 bits (245), Expect = 2e-22
Identities = 40/92 (43%), Positives = 64/92 (69%)
Frame = +3
Query: 315 KRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFK 494
+R+ R+ + L DPPA S P +++ W+A I GP ++P++ G F L++ F +YP K
Sbjct: 7 RRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNK 66
Query: 495 PPKVAFTTRIYHPNINSNGSICLDILRAQWSP 590
PP V F ++++HPN+ ++GSICLDIL+ +WSP
Sbjct: 67 PPTVKFISKMFHPNVYADGSICLDILQNRWSP 98
>AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical
protein F52C6.12 protein.
Length = 78
Score = 101 bits (242), Expect = 4e-22
Identities = 43/54 (79%), Positives = 48/54 (88%)
Frame = +3
Query: 306 MALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTI 467
MALKRI +EL DLGRDPPAQCS G G+DL+HWQATIMGP +SPYQGG+FFLTI
Sbjct: 1 MALKRIQKELHDLGRDPPAQCSTGSVGDDLYHWQATIMGPPESPYQGGIFFLTI 54
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 99.5 bits (237), Expect = 2e-21
Identities = 47/94 (50%), Positives = 59/94 (62%)
Frame = +3
Query: 315 KRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFK 494
+RI +E Q L DP SA P + ++ I GP DSP+ GGVF L + P +YP
Sbjct: 7 RRIIKETQRLLADPVPGISANPDESNARYFHVMIAGPDDSPFAGGVFKLELFLPEEYPMA 66
Query: 495 PPKVAFTTRIYHPNINSNGSICLDILRAQWSPAL 596
PKV F T+IYHPNI+ G ICLDIL+ +WSPAL
Sbjct: 67 APKVRFMTKIYHPNIDKLGRICLDILKDKWSPAL 100
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 87.0 bits (206), Expect = 9e-18
Identities = 41/91 (45%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Frame = +3
Query: 309 ALKRINRELQDLGRDPPAQCSAGPHGED-LFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 485
ALKR+ E ++L PP A P ED F W+ I GP ++ + GVF I FP DY
Sbjct: 5 ALKRLMTEYKELTTRPPEGIIAAPIDEDNFFEWECLITGPEETCFANGVFPARITFPQDY 64
Query: 486 PFKPPKVAFTTRIYHPNINSNGSICLDILRA 578
P PPK+ FT I+HPNI ++G +C+ IL A
Sbjct: 65 PLSPPKMRFTCGIFHPNIYADGRVCISILHA 95
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 85.8 bits (203), Expect = 2e-17
Identities = 36/93 (38%), Positives = 57/93 (61%)
Frame = +3
Query: 300 SQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPT 479
S AL+ + EL++L P + + ++LF W I GP + YQGG F +I FP+
Sbjct: 8 SSGALRALTMELKNLQSQPVEGFTIDVNEDNLFVWTVGIYGPPKTLYQGGYFKASIRFPS 67
Query: 480 DYPFKPPKVAFTTRIYHPNINSNGSICLDILRA 578
+YP+ PP + FTT+++HPN+ NG +C+ IL +
Sbjct: 68 NYPYSPPSMKFTTKVWHPNVYENGDLCISILHS 100
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 85.4 bits (202), Expect = 3e-17
Identities = 38/72 (52%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Frame = +3
Query: 387 EDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSICL 563
E+L + I GP D+PY GG+F L I P YPF PP V F+T+I+HPN++S G ICL
Sbjct: 34 ENLTEIKGHIRGPPDTPYAGGMFDLDIKIPDQYPFSPPNVKFSTKIWHPNVSSQTGVICL 93
Query: 564 DILRAQWSPALT 599
DIL+ QW+ +LT
Sbjct: 94 DILKDQWAASLT 105
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 83.8 bits (198), Expect = 8e-17
Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Frame = +3
Query: 321 INRELQDLGRDPPAQCSAG-PHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKP 497
+ ++L D+ R P SAG D++ W+ ++GP D+ Y+GG F + FP DYP KP
Sbjct: 8 LKKQLADMRRVPVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKP 67
Query: 498 PKVAFTTRIYHPNINSNGSICLDIL 572
PK+ F + I+HPNI+ G++C+ IL
Sbjct: 68 PKMKFISEIWHPNIDKEGNVCISIL 92
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 82.2 bits (194), Expect = 3e-16
Identities = 42/97 (43%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
Frame = +3
Query: 309 ALKRINRELQDLGR-DPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 485
A +R+ +EL DL A + +L W ++ P PY G F + I FP DY
Sbjct: 3 ATRRLQKELGDLKNCGVKAYENVECEETNLLKWTVLLI-PDKEPYNKGAFKVGITFPVDY 61
Query: 486 PFKPPKVAFTTRIYHPNINSNGSICLDILRAQ-WSPA 593
PFKPPKVAF T+IYHPN++ G CL I+ A+ W PA
Sbjct: 62 PFKPPKVAFETKIYHPNVDEEGKFCLPIVTAENWKPA 98
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 72.1 bits (169), Expect = 3e-13
Identities = 45/120 (37%), Positives = 64/120 (53%), Gaps = 20/120 (16%)
Frame = +3
Query: 300 SQMALKRINRELQDLGRDPPAQCSAGPHGE----DLFHWQATIMGPVDSPYQGGVFFLTI 467
S +AL R+ R+ +++ AG H E +L + I GP +PY GG F + +
Sbjct: 16 SNLALARVTRKCKEVANASDIT-EAGIHVEIKENNLMDIKGFIKGPEGTPYAGGTFEIKV 74
Query: 468 HFPTDYPFKPPKVA---------------FTTRIYHPNINSN-GSICLDILRAQWSPALT 599
P YPF+PPKV F TRI+HPNI+S G+ICLDIL+ +W+ +LT
Sbjct: 75 DIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRIWHPNISSQTGTICLDILKDKWTASLT 134
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 66.9 bits (156), Expect = 1e-11
Identities = 39/104 (37%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Frame = +3
Query: 300 SQMALKRINRELQDLGRDPPAQCSAG--PHGEDLFHWQATIMGPVDSPYQGGVFFLTIHF 473
S A +R+ +EL L + P DL W+ ++G + Y G VF L F
Sbjct: 2 SDAATRRLMKELAQLKSEAPEGLLVDNTSTSNDLKQWKIGVVGAEGTLYAGEVFMLQFTF 61
Query: 474 PTDYPFKPPKVAFT--TRIYHPNINSNGSICLDILRAQWSPALT 599
YPF P+V F T HP+I SNG ICL IL W+PAL+
Sbjct: 62 GPQYPFNSPEVMFVGETIPAHPHIYSNGHICLSILSDDWTPALS 105
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 65.7 bits (153), Expect = 2e-11
Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Frame = +3
Query: 300 SQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPT 479
S +AL+R+ ++ Q L ++P A P ++ W+ I+G +PY+GG++ + FP
Sbjct: 6 STVALQRLKKDYQRLLKEPVPFMKAAPLETNILEWRYIIIGAPKTPYEGGIYMGKLLFPK 65
Query: 480 DYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQ---WSPALT 599
D+PFKPP + T + +N +CL I W+PA T
Sbjct: 66 DFPFKPPAILMLTP--NGRFQTNTRLCLSISDYHPDTWNPAWT 106
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 64.9 bits (151), Expect = 4e-11
Identities = 23/57 (40%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Frame = +3
Query: 420 GPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN-SNGSICLDILRAQWS 587
GP D+ Y+ GV+ + + P YPFK P + F +I+HPNI+ ++G++CLD++ W+
Sbjct: 41 GPKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGTVCLDVINQAWT 97
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 64.1 bits (149), Expect = 7e-11
Identities = 24/72 (33%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Frame = +3
Query: 390 DLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDI 569
+LF+W+ I G D+ ++GG++ + + F D+P PPK F ++HPN+ +G++CL +
Sbjct: 37 NLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSL 96
Query: 570 L--RAQWSPALT 599
L W P+++
Sbjct: 97 LDENKDWKPSIS 108
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 64.1 bits (149), Expect = 7e-11
Identities = 24/72 (33%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Frame = +3
Query: 390 DLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDI 569
+LF+W+ I G D+ ++GG++ + + F D+P PPK F ++HPN+ +G++CL +
Sbjct: 37 NLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSL 96
Query: 570 L--RAQWSPALT 599
L W P+++
Sbjct: 97 LDENKDWKPSIS 108
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 60.9 bits (141), Expect = 7e-10
Identities = 28/67 (41%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Frame = +3
Query: 405 QATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSICL-DILRA 578
Q I G ++PY+GG+F L I YPFK P V F T+I+HP+++ +G+ICL D+
Sbjct: 382 QGIIKGVEETPYEGGIFELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGTICLHDVDNG 441
Query: 579 QWSPALT 599
W ++T
Sbjct: 442 VWPVSMT 448
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 60.9 bits (141), Expect = 7e-10
Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 5/58 (8%)
Frame = +3
Query: 414 IMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTR-----IYHPNINSNGSICLDIL 572
I GP D+PY G+F I FPT YPF PPK AF T ++PN+ ++G ICL IL
Sbjct: 449 ISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSIL 506
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 60.5 bits (140), Expect = 9e-10
Identities = 32/100 (32%), Positives = 50/100 (50%)
Frame = +3
Query: 270 VESQYNST*NSQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGG 449
+ QYN+ ++R+ +E +L R P A P ++LF W TI G + + ++GG
Sbjct: 1 MSEQYNT---KNAGVRRLMKEAMEL-RQPTEMYHAQPMEDNLFEWHFTIRGTLGTDFEGG 56
Query: 450 VFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDI 569
++ I FP DYP KPP + T + N +CL I
Sbjct: 57 IYHGRIIFPADYPMKPPNLILLTP--NGRFELNKKVCLSI 94
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 56.0 bits (129), Expect = 2e-08
Identities = 25/51 (49%), Positives = 32/51 (62%)
Frame = +3
Query: 423 PVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR 575
P + Y+GG F I P +Y PP V T+++HPNIN +GSICL ILR
Sbjct: 67 PQEGIYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILR 117
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Frame = +3
Query: 384 GEDLF-HWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSIC 560
G D++ W T+ GP SP++GG + ++++F +P PP F T ++HPN++ GSI
Sbjct: 64 GADIWCSWICTVPGPRGSPWEGGEYEVSVNFHK-WPIIPPICEFKTPLHHPNVDLRGSIY 122
Query: 561 LDILRAQ-WS 587
L +L + WS
Sbjct: 123 LKMLEQEHWS 132
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 52.4 bits (120), Expect = 2e-07
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Frame = +3
Query: 300 SQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPT 479
S A++R+ ++ L +DP A P+ +++ W + G D+P+ GG ++ + F
Sbjct: 17 SSSAVRRLQKDYAKLMQDPVDGIKALPNEDNILEWHYCLRGSPDTPFYGGYYWGKVIFKE 76
Query: 480 DYPFKPPKVAFTTRIYHPNINSNGSICL---DILRAQWSPALT 599
++P+ PP + T + +N +CL D W+P T
Sbjct: 77 NFPWSPPAITMITP--NGRFQTNTRLCLSISDYHPESWNPGWT 117
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +3
Query: 393 LFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN-SNGSI 557
L W A+I+GP +PY+ ++ L I +YP +PP V FTT+++ +N SNG I
Sbjct: 38 LTRWTASIIGPPRTPYESRIYNLQIQCGGNYPREPPTVRFTTKVHMVGVNQSNGVI 93
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 46.8 bits (106), Expect = 1e-05
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Frame = +3
Query: 312 LKRINRELQDLGRDPPAQCSAGPHGE---DLFHWQATIMGPVDSPYQGGVFFLTIHFPTD 482
L RI +E+ DL ++ E D+F ++ G + Y+ +F LT+ +
Sbjct: 15 LSRIRKEIADLAKNKRRFIKDFRKIEKCKDIFQFKIIGDGVL---YKNMIFTLTLDVNVE 71
Query: 483 YPFKPPKVAFTTRIYHPNINS-NGSICLD-ILRAQWSPALT 599
YPFKPP + F +YHPN++ +C +L+ W P T
Sbjct: 72 YPFKPPYLKFCHNVYHPNVDPVTCELCSPMLLQENWKPETT 112
>Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical
protein F26H9.7 protein.
Length = 219
Score = 43.6 bits (98), Expect = 1e-04
Identities = 27/65 (41%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +3
Query: 393 LFHWQATIMGPVDSPYQGGVFFLTIHF-PTDYPFKPPKVAFTTRIYHPNINSNGSICLDI 569
LFH I GPV S Y+GG FF I+ P P+V F T I+HPN+ G+ D+
Sbjct: 63 LFH--VIIDGPVGSIYEGGTFFADINIQPYQNHSLIPRVCFHTFIFHPNLGKYGN--WDM 118
Query: 570 LRAQW 584
QW
Sbjct: 119 RGIQW 123
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Frame = +3
Query: 414 IMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN-SNGSICLD 566
I GP D+PY+ GVF + + FP +YP P++ F T I++ + S G + ++
Sbjct: 35 IAGPADTPYETGVFEVDLTFPDNYPNALPQIKFQTLIWNCAVEPSTGQVHIE 86
>Z98877-7|CAB63403.1| 292|Caenorhabditis elegans Hypothetical
protein Y69H2.6 protein.
Length = 292
Score = 30.7 bits (66), Expect = 0.83
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 4/83 (4%)
Frame = +3
Query: 330 ELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKP--PK 503
E ++ R P P + F W I + GG+F IH P ++P P+
Sbjct: 27 EFVEVCRAPIDGIFVSPSANNKFLWFGVIFVR-KGIFGGGIFRFNIHIPLEFPDASDLPR 85
Query: 504 VAF-TTRIYHPNI-NSNGSICLD 566
V F + ++HP I + +CL+
Sbjct: 86 VIFEQSNLFHPLICTKSKELCLN 108
>AF100307-11|AAC68929.1| 304|Caenorhabditis elegans Hypothetical
protein T12B5.3 protein.
Length = 304
Score = 29.1 bits (62), Expect = 2.5
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = -2
Query: 494 FERVVCREMYGKEENSSLIRTVNWA--HNCGLPMEQIF 387
FER+ C E + +N+ T W HNC +P+EQ+F
Sbjct: 185 FERLACLEQW---KNAKTFETP-WVLVHNCQIPIEQLF 218
>AL032639-9|CAA21633.1| 303|Caenorhabditis elegans Hypothetical
protein Y38F1A.8 protein.
Length = 303
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -1
Query: 300 YFMLSYTDFQLDNETVSQGPLIRDCKMAPCLNAKVPPKSFYVVIVKSQQ 154
YF+++YT + E VS +CK P +N +PP S+ + I + Q+
Sbjct: 59 YFVVAYT-YLFQFEKVSN---FTECKECPNMNITLPPVSYSIGIWQPQK 103
>Z82059-12|CAB04880.1| 622|Caenorhabditis elegans Hypothetical
protein T27E9.7 protein.
Length = 622
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = -3
Query: 121 IILTYNTKEIIIGTKHELIEIKHFSANGEQQTGKSTM 11
+ +T++ +EI++ TK EL + + G +GKST+
Sbjct: 87 LTITFHGREIVVDTKLELNRGRRYGLIGLNGSGKSTI 123
>U20783-1|AAC46845.1| 535|Caenorhabditis elegans unknown protein.
Length = 535
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = -3
Query: 121 IILTYNTKEIIIGTKHELIEIKHFSANGEQQTGKSTM 11
+ +T++ +EI++ TK EL + + G +GKST+
Sbjct: 86 LTITFHGREIVVDTKLELNRGRRYGLIGLNGSGKSTI 122
>AL032665-2|CAA21772.1| 622|Caenorhabditis elegans Hypothetical
protein T27E9.7 protein.
Length = 622
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = -3
Query: 121 IILTYNTKEIIIGTKHELIEIKHFSANGEQQTGKSTM 11
+ +T++ +EI++ TK EL + + G +GKST+
Sbjct: 87 LTITFHGREIVVDTKLELNRGRRYGLIGLNGSGKSTI 123
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,905,224
Number of Sequences: 27780
Number of extensions: 329351
Number of successful extensions: 860
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 851
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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