Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt7d24
         (544 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY193727-1|AAO24698.1|  492|Anopheles gambiae cytochrome P450 pr...    24   2.8  
AF487780-1|AAL96667.1|  490|Anopheles gambiae cytochrome P450 CY...    24   2.8  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    23   8.6  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   8.6  
AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax home...    23   8.6  
AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax home...    23   8.6  

>AY193727-1|AAO24698.1|  492|Anopheles gambiae cytochrome P450
           protein.
          Length = 492

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +2

Query: 71  YV*TLYVA*LKMQLVLRYFRGPWDTRAPYHWKPSI 175
           +V TL +    + LVLRY    W+     H KP I
Sbjct: 2   FVYTLALVAAVIFLVLRYIYSHWERHGLPHLKPEI 36


>AF487780-1|AAL96667.1|  490|Anopheles gambiae cytochrome P450
           CYP6Z2 protein protein.
          Length = 490

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +2

Query: 71  YV*TLYVA*LKMQLVLRYFRGPWDTRAPYHWKPSI 175
           +V TL +    + LVLRY    W+     H KP I
Sbjct: 2   FVYTLALVAAVIFLVLRYIYSHWERHGLPHLKPEI 36


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
            gambiae RT2 retroposon. ).
          Length = 1222

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +2

Query: 236  QDSYRYRNWIYHTVPALG 289
            QD+ R+  W +  +P++G
Sbjct: 948  QDASRHTRWTHRVIPSVG 965


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 289 PGGQNVNKVHTKVDLR 336
           PGG +V  VH K+D++
Sbjct: 767 PGGGDVKIVHQKLDIK 782


>AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax
           homeotic protein IVa protein.
          Length = 310

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
 Frame = +1

Query: 178 NSSLKLTTPAFKPD----GNEKFSGFIPIQKLDISYSASSGPGGQNVNK 312
           NSS+ +   A  PD    G    SG  P+ +   + +A+  PG  N N+
Sbjct: 134 NSSVPVRPSACTPDSRVGGYIDASGGSPVSRAGSAAAATGVPGSWNTNQ 182


>AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax
           homeotic protein IIa protein.
          Length = 327

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
 Frame = +1

Query: 178 NSSLKLTTPAFKPD----GNEKFSGFIPIQKLDISYSASSGPGGQNVNK 312
           NSS+ +   A  PD    G    SG  P+ +   + +A+  PG  N N+
Sbjct: 134 NSSVPVRPSACTPDSRVGGYIDASGGSPVSRAGSAAAAAGVPGSWNTNQ 182


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 546,421
Number of Sequences: 2352
Number of extensions: 10102
Number of successful extensions: 22
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50040333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)