Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt7d17
         (617 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071157-1|AAL48779.1|  166|Drosophila melanogaster RE19416p pro...   115   6e-26
AE013599-2022|AAF58161.2|  166|Drosophila melanogaster CG12954-P...   115   6e-26

>AY071157-1|AAL48779.1|  166|Drosophila melanogaster RE19416p
           protein.
          Length = 166

 Score =  115 bits (276), Expect = 6e-26
 Identities = 66/150 (44%), Positives = 84/150 (56%), Gaps = 1/150 (0%)
 Frame = +3

Query: 87  KRNISVTATREGKRNFRKFVIPNKRGSVLHKKKQMT-EDREFEIDKRGVRDIGYNLNGRF 263
           +R IS ++  EGKRNFRKF   NKRG+ + K+ Q T  +    I KRGVRD G  ++G++
Sbjct: 16  QRTISTSSVLEGKRNFRKFNAYNKRGTRVVKEAQKTLANPPVAIHKRGVRDTGILVDGQY 75

Query: 264 XXXXXXXXXXXXXNLKDFDLKPYVSYKAADVIQSEFTPSQLFDAVYSKKIVTDFKQGKLD 443
                        +L    LKPYVSYKA DV+QSEFT   LF+AVYS+KI+ DFK GKL 
Sbjct: 76  VEIPEKIPDIIVPDLTGCKLKPYVSYKAPDVVQSEFTSLDLFNAVYSQKIIEDFKAGKLQ 135

Query: 444 XXXXXXXXXXXXXXXXXXXXXRAKQTGSDI 533
                                RA++TGSDI
Sbjct: 136 KDGSAKEPSVNEQLTPEEALQRARKTGSDI 165


>AE013599-2022|AAF58161.2|  166|Drosophila melanogaster CG12954-PA
           protein.
          Length = 166

 Score =  115 bits (276), Expect = 6e-26
 Identities = 66/150 (44%), Positives = 84/150 (56%), Gaps = 1/150 (0%)
 Frame = +3

Query: 87  KRNISVTATREGKRNFRKFVIPNKRGSVLHKKKQMT-EDREFEIDKRGVRDIGYNLNGRF 263
           +R IS ++  EGKRNFRKF   NKRG+ + K+ Q T  +    I KRGVRD G  ++G++
Sbjct: 16  QRTISTSSVLEGKRNFRKFNAYNKRGTRVVKEAQKTLANPPVAIHKRGVRDTGILVDGQY 75

Query: 264 XXXXXXXXXXXXXNLKDFDLKPYVSYKAADVIQSEFTPSQLFDAVYSKKIVTDFKQGKLD 443
                        +L    LKPYVSYKA DV+QSEFT   LF+AVYS+KI+ DFK GKL 
Sbjct: 76  VEIPEKIPDIIVPDLTGCKLKPYVSYKAPDVVQSEFTSLDLFNAVYSQKIIEDFKAGKLQ 135

Query: 444 XXXXXXXXXXXXXXXXXXXXXRAKQTGSDI 533
                                RA++TGSDI
Sbjct: 136 KDGSAKEPSVNEQLTPEEALQRARKTGSDI 165


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,735,486
Number of Sequences: 53049
Number of extensions: 358024
Number of successful extensions: 687
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 685
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2538517050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)