Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt7d10
         (641 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-10|CAJ14161.1|  519|Anopheles gambiae Sply, Sphingosine...    27   0.38 
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    27   0.38 
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           26   1.2  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    26   1.2  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    24   3.6  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    24   4.7  
AJ439060-6|CAD27757.1|  297|Anopheles gambiae hypothetical prote...    23   6.2  

>CR954257-10|CAJ14161.1|  519|Anopheles gambiae Sply,
           Sphingosine-phosphate lyase protein.
          Length = 519

 Score = 27.5 bits (58), Expect = 0.38
 Identities = 12/27 (44%), Positives = 20/27 (74%)
 Frame = -3

Query: 399 PYQVVANVSTSML*PLWMICQGSWQEE 319
           P+Q+VA  +T++L  +W +CQ  +QEE
Sbjct: 21  PWQIVAITTTTVLGSIW-LCQVLFQEE 46


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 27.5 bits (58), Expect = 0.38
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
 Frame = +3

Query: 393 DMETKTQMAKEYQKDLEDYNKIKAMYETSLTEEQKAD-IKRVKEEMAQAKEKRKLKAEYK 569
           + E K +   EY + +ED  K     +  L+E QK D  +R  E +    E ++ + + +
Sbjct: 181 ESEGKLEKISEYLRTIEDRLKTLEEEKEELSEYQKWDKARRTLEYVIYETELKETRKQLE 240

Query: 570 ELGRPKK 590
           EL   +K
Sbjct: 241 ELDGQRK 247


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -3

Query: 399 PYQVVANVSTSML*PLWMICQGSWQEELV 313
           PYQ +A+  +S +  +W+  +G W  EL+
Sbjct: 75  PYQKLASCDSSGIIFVWIKYEGRWSVELI 103


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +3

Query: 3   LWSCGRFVSFIVSLPYFVFELNIFLFINI 89
           LW+CG+   F V LP+    L+IFLF ++
Sbjct: 353 LWACGQTGIFGVDLPF----LHIFLFSSL 377


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 14/57 (24%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
 Frame = +3

Query: 483  TEEQKADIKRVKEEMAQAKEK-----RKLKAEYKELGRPKKPMSSYFIYMQSRKDNI 638
            T+E  A +  +K+++ Q KEK     ++LKA+Y +  +  K      + ++ +++ I
Sbjct: 859  TDEMTAAVTALKQQIKQHKEKMNSQSKELKAKYHQRDKLLKQNDELKLEIKKKENEI 915


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 393 DMETKTQMAKEYQKDLEDYNK 455
           D+ET  +   EY + LED+ +
Sbjct: 731 DLETSKKNINEYDRQLEDFTR 751


>AJ439060-6|CAD27757.1|  297|Anopheles gambiae hypothetical protein
           protein.
          Length = 297

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +3

Query: 222 DYTKKSAEQRLGLNKPKRPLTP 287
           + +++  E+   L KPK+P+ P
Sbjct: 276 EVSRRGGEEETELKKPKKPICP 297


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 617,644
Number of Sequences: 2352
Number of extensions: 11646
Number of successful extensions: 58
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 58
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)