Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt7d01
         (156 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    24   0.16 
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    19   5.9  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    18   7.9  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    18   7.9  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    18   7.9  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     18   7.9  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.8 bits (49), Expect = 0.16
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +1

Query: 22  KMGIDINHKHDRKV 63
           K+G++INHK D +V
Sbjct: 406 KLGLEINHKEDFRV 419


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 18.6 bits (36), Expect = 5.9
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +1

Query: 13  LVVKMGIDINHKHDR 57
           L+VK+ IDI+ + +R
Sbjct: 323 LIVKIKIDIDKEDER 337



 Score = 18.6 bits (36), Expect = 5.9
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +1

Query: 13  LVVKMGIDINHKHDR 57
           L+VK+ IDI+ + +R
Sbjct: 376 LIVKIRIDIDKEDER 390


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 18.2 bits (35), Expect = 7.9
 Identities = 4/6 (66%), Positives = 6/6 (100%)
 Frame = -3

Query: 145 HLYVWP 128
           HL++WP
Sbjct: 211 HLHIWP 216


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 18.2 bits (35), Expect = 7.9
 Identities = 4/6 (66%), Positives = 6/6 (100%)
 Frame = -3

Query: 145 HLYVWP 128
           HL++WP
Sbjct: 211 HLHIWP 216


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 18.2 bits (35), Expect = 7.9
 Identities = 4/6 (66%), Positives = 6/6 (100%)
 Frame = -3

Query: 145 HLYVWP 128
           HL++WP
Sbjct: 211 HLHIWP 216


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund
          protein.
          Length = 301

 Score = 18.2 bits (35), Expect = 7.9
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -3

Query: 73 RCAELSCRVYD 41
          RC  LSC+ +D
Sbjct: 15 RCKLLSCKDFD 25


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,739
Number of Sequences: 336
Number of extensions: 392
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 32
effective length of database: 111,833
effective search space used:  2124827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)