Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt7d01
         (156 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L11566-1|AAA16329.1|  188|Homo sapiens ribosomal protein L18 pro...    40   0.001
BC021743-1|AAH21743.1|  188|Homo sapiens ribosomal protein L18 p...    40   0.001
BC009708-1|AAH09708.1|  188|Homo sapiens ribosomal protein L18 p...    40   0.001
BC000374-1|AAH00374.1|  188|Homo sapiens ribosomal protein L18 p...    40   0.001
AB061825-1|BAB79463.1|  188|Homo sapiens ribosomal protein L18 p...    40   0.001

>L11566-1|AAA16329.1|  188|Homo sapiens ribosomal protein L18
           protein.
          Length = 188

 Score = 39.9 bits (89), Expect = 0.001
 Identities = 20/44 (45%), Positives = 22/44 (50%)
 Frame = +1

Query: 25  MGIDINHKHDRKVRRTEVKSXDIXXXXXXXXXXXXXXXTNAKFN 156
           MG+DI H  DRKVRR E KS DI               TN+ FN
Sbjct: 1   MGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFN 44


>BC021743-1|AAH21743.1|  188|Homo sapiens ribosomal protein L18
           protein.
          Length = 188

 Score = 39.9 bits (89), Expect = 0.001
 Identities = 20/44 (45%), Positives = 22/44 (50%)
 Frame = +1

Query: 25  MGIDINHKHDRKVRRTEVKSXDIXXXXXXXXXXXXXXXTNAKFN 156
           MG+DI H  DRKVRR E KS DI               TN+ FN
Sbjct: 1   MGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFN 44


>BC009708-1|AAH09708.1|  188|Homo sapiens ribosomal protein L18
           protein.
          Length = 188

 Score = 39.9 bits (89), Expect = 0.001
 Identities = 20/44 (45%), Positives = 22/44 (50%)
 Frame = +1

Query: 25  MGIDINHKHDRKVRRTEVKSXDIXXXXXXXXXXXXXXXTNAKFN 156
           MG+DI H  DRKVRR E KS DI               TN+ FN
Sbjct: 1   MGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFN 44


>BC000374-1|AAH00374.1|  188|Homo sapiens ribosomal protein L18
           protein.
          Length = 188

 Score = 39.9 bits (89), Expect = 0.001
 Identities = 20/44 (45%), Positives = 22/44 (50%)
 Frame = +1

Query: 25  MGIDINHKHDRKVRRTEVKSXDIXXXXXXXXXXXXXXXTNAKFN 156
           MG+DI H  DRKVRR E KS DI               TN+ FN
Sbjct: 1   MGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFN 44


>AB061825-1|BAB79463.1|  188|Homo sapiens ribosomal protein L18
           protein.
          Length = 188

 Score = 39.9 bits (89), Expect = 0.001
 Identities = 20/44 (45%), Positives = 22/44 (50%)
 Frame = +1

Query: 25  MGIDINHKHDRKVRRTEVKSXDIXXXXXXXXXXXXXXXTNAKFN 156
           MG+DI H  DRKVRR E KS DI               TN+ FN
Sbjct: 1   MGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFN 44


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,463,920
Number of Sequences: 237096
Number of extensions: 246655
Number of successful extensions: 240
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 240
length of database: 76,859,062
effective HSP length: 31
effective length of database: 69,509,086
effective search space used: 1390181720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)