Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt7c14
         (637 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    24   4.6  
AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    24   4.6  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   8.1  

>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
 Frame = +3

Query: 75  KLNYARKQLSSNEYKAIPQLNALSLRLYSESKVETKVADYD----EVVKAISNNNILLID 242
           K+ Y R+++  +   AIP +  +  R  +  ++    A  +    E+V+   NNN LL +
Sbjct: 64  KIGYIRREIVKDSV-AIPDMPEVIPRTPNSREIIDLEAQLEKTENEIVELSENNNALLQN 122

Query: 243 VREPDEVK 266
             E  E+K
Sbjct: 123 FMELTELK 130


>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +3

Query: 162 ESKVETKVADYDEVVKAISNNNILLIDVR 248
           ++K +T   DY  VVK  +N+ +L+   R
Sbjct: 268 DTKYDTIEGDYPLVVKKSNNHTVLITQAR 296


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 8/25 (32%), Positives = 18/25 (72%)
 Frame = +2

Query: 35   NNTKVSNYFRGLFEVELCTKTIIIE 109
            N  ++S+Y  G+++V+ CT ++ I+
Sbjct: 1250 NMFELSDYLVGIYKVKDCTDSVTIK 1274


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 556,773
Number of Sequences: 2352
Number of extensions: 9787
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)