Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt7c13
         (655 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    26   1.2  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    26   1.2  
EF588657-1|ABQ96843.1|  176|Anopheles gambiae transposase protein.     25   2.8  
EF588632-1|ABQ96822.1|  176|Anopheles gambiae transposase protein.     25   2.8  
EF588625-1|ABQ96815.1|  177|Anopheles gambiae transposase protein.     25   2.8  
EF588618-1|ABQ96809.1|  176|Anopheles gambiae transposase protein.     25   2.8  
EF588615-1|ABQ96806.1|  176|Anopheles gambiae transposase protein.     25   2.8  

>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = -1

Query: 385 VNAARRYRLAGESRRFTINAIRVPMLRIKAMIIIQLLVC 269
           V+    YR +  +R+  I+  ++  LRI  +I++  +VC
Sbjct: 390 VDRTTYYRRSDTNRQRLIHKAKMKSLRISVVIVVAFVVC 428


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = -1

Query: 385 VNAARRYRLAGESRRFTINAIRVPMLRIKAMIIIQLLVC 269
           V+    YR +  +R+  I+  ++  LRI  +I++  +VC
Sbjct: 391 VDRTTYYRRSDTNRQRLIHKAKMKSLRISVVIVVAFVVC 429


>EF588657-1|ABQ96843.1|  176|Anopheles gambiae transposase protein.
          Length = 176

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -3

Query: 293 DHH-PIIGVYKCLYGLNKHKYSRNGDRSQELH 201
           DH  P+    KCLYGL   KY++    + + H
Sbjct: 13  DHFSPVETGAKCLYGLKVFKYTKGTTSNLKRH 44


>EF588632-1|ABQ96822.1|  176|Anopheles gambiae transposase protein.
          Length = 176

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -3

Query: 293 DHH-PIIGVYKCLYGLNKHKYSRNGDRSQELH 201
           DH  P+    KCLYGL   KY++    + + H
Sbjct: 13  DHFSPVETGAKCLYGLKVFKYNKGTTSNLKRH 44


>EF588625-1|ABQ96815.1|  177|Anopheles gambiae transposase protein.
          Length = 177

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -3

Query: 293 DHH-PIIGVYKCLYGLNKHKYSRNGDRSQELH 201
           DH  P+    KCLYGL   KY++    + + H
Sbjct: 14  DHFSPVETGAKCLYGLKVFKYTKGTTSNLKRH 45


>EF588618-1|ABQ96809.1|  176|Anopheles gambiae transposase protein.
          Length = 176

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -3

Query: 293 DHH-PIIGVYKCLYGLNKHKYSRNGDRSQELH 201
           DH  P+    KCLYGL   KY++    + + H
Sbjct: 13  DHFSPVETGAKCLYGLKVFKYTKGTTSNLKRH 44


>EF588615-1|ABQ96806.1|  176|Anopheles gambiae transposase protein.
          Length = 176

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -3

Query: 293 DHH-PIIGVYKCLYGLNKHKYSRNGDRSQELH 201
           DH  P+    KCLYGL   KY++    + + H
Sbjct: 13  DHFSPVETGAKCLYGLKVFKYTKGTTSNLKRH 44


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 705,917
Number of Sequences: 2352
Number of extensions: 16911
Number of successful extensions: 37
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)