Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt7c08
         (657 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7Q1R0 Cluster: ENSANGP00000010270; n=2; Culicidae|Rep:...    46   0.001
UniRef50_UPI000051AACD Cluster: PREDICTED: similar to CG3305-PA ...    38   0.28 
UniRef50_Q26BP7 Cluster: Putative uncharacterized protein; n=1; ...    35   2.0  
UniRef50_Q18911 Cluster: Putative uncharacterized protein D1005....    33   4.6  
UniRef50_UPI0000E49594 Cluster: PREDICTED: similar to Inscuteabl...    33   8.0  
UniRef50_Q5DYQ8 Cluster: Putative uncharacterized protein; n=1; ...    33   8.0  

>UniRef50_Q7Q1R0 Cluster: ENSANGP00000010270; n=2; Culicidae|Rep:
           ENSANGP00000010270 - Anopheles gambiae str. PEST
          Length = 325

 Score = 45.6 bits (103), Expect = 0.001
 Identities = 18/46 (39%), Positives = 29/46 (63%)
 Frame = +1

Query: 520 DQGNWTYTDSETNITCIVLKFAAQFNVTYTKVDNVSSFAHVVFNVP 657
           D G+W+YTD+  N TC++ + A QFN++Y   D       V++N+P
Sbjct: 105 DMGSWSYTDTSKNETCVIAQMAMQFNLSYFDTDGKP--VSVLYNLP 148


>UniRef50_UPI000051AACD Cluster: PREDICTED: similar to CG3305-PA
           isoform 2; n=1; Apis mellifera|Rep: PREDICTED: similar
           to CG3305-PA isoform 2 - Apis mellifera
          Length = 350

 Score = 37.5 bits (83), Expect = 0.28
 Identities = 15/44 (34%), Positives = 27/44 (61%)
 Frame = +1

Query: 526 GNWTYTDSETNITCIVLKFAAQFNVTYTKVDNVSSFAHVVFNVP 657
           G WT  +    I CIV++ +  FN++Y  ++N +SF  + F++P
Sbjct: 135 GKWTVVNGTDQI-CIVIQMSVMFNISYVNINNKTSF--ITFDIP 175


>UniRef50_Q26BP7 Cluster: Putative uncharacterized protein; n=1;
           Flavobacteria bacterium BBFL7|Rep: Putative
           uncharacterized protein - Flavobacteria bacterium BBFL7
          Length = 186

 Score = 34.7 bits (76), Expect = 2.0
 Identities = 19/43 (44%), Positives = 23/43 (53%)
 Frame = +1

Query: 526 GNWTYTDSETNITCIVLKFAAQFNVTYTKVDNVSSFAHVVFNV 654
           G+W YTD ETN T          ++T   VD VSS A + FNV
Sbjct: 45  GDWLYTDVETNTTTTTTVSGTPVSIT-ASVDFVSSNAIMTFNV 86


>UniRef50_Q18911 Cluster: Putative uncharacterized protein D1005.6;
           n=1; Caenorhabditis elegans|Rep: Putative
           uncharacterized protein D1005.6 - Caenorhabditis elegans
          Length = 131

 Score = 33.5 bits (73), Expect = 4.6
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = -1

Query: 153 NDCVKISKMQHFDFFRNYKCRHK 85
           N C+K  KMQ+F FF N+KC  K
Sbjct: 71  NFCIKKKKMQNFQFFFNFKCFEK 93


>UniRef50_UPI0000E49594 Cluster: PREDICTED: similar to Inscuteable,
           partial; n=1; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to Inscuteable, partial -
           Strongylocentrotus purpuratus
          Length = 464

 Score = 32.7 bits (71), Expect = 8.0
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
 Frame = +1

Query: 10  SFRIAL*SDYRLESYLNNLIVQFLLFVTALVIPKKIEMLHFRYFYTIVVLFSC---CRAG 180
           +F  A+ SDY  E     +++Q  L   A  I  K +++      TI+   SC   CR  
Sbjct: 265 TFMDAMASDYLAEFQTAEVLIQGYLKGKAPSIYSKHQVI------TIIANISCSKSCREQ 318

Query: 181 HLSAGG---LATELIDVPTSTKPTSLEDKM 261
            +S+GG   LA  L  VP++++PTSL  K+
Sbjct: 319 IVSSGGMNILAELLQGVPSTSRPTSLSRKL 348


>UniRef50_Q5DYQ8 Cluster: Putative uncharacterized protein; n=1;
           Vibrio fischeri ES114|Rep: Putative uncharacterized
           protein - Vibrio fischeri (strain ATCC 700601 / ES114)
          Length = 167

 Score = 32.7 bits (71), Expect = 8.0
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +1

Query: 100 VIPKKIEMLHFRYFYTIVVLFSCCRAGHLSAGGLATELIDVPTSTKPTSL 249
           VI KK+ M+      ++ ++ SC  +G  S+GG A  + + P S K   L
Sbjct: 16  VIMKKVIMISMTSLASLFLIVSCSDSGGFSSGGTAPTVAEEPESVKTQDL 65


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 370,577,280
Number of Sequences: 1657284
Number of extensions: 5270608
Number of successful extensions: 11340
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11338
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49586781480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)