Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt7c07
(371 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P18932 Cluster: NADH-ubiquinone oxidoreductase chain 5;... 74 7e-13
UniRef50_P34854 Cluster: NADH-ubiquinone oxidoreductase chain 5;... 69 4e-11
UniRef50_Q8SG50 Cluster: NADH dehydrogenase subunit 5; n=1; Chir... 66 1e-10
UniRef50_Q8SG46 Cluster: NADH dehydrogenase subunit 5; n=1; Gast... 66 2e-10
UniRef50_Q2QC27 Cluster: NADH dehydrogenase subunit 5; n=66; Pol... 66 2e-10
UniRef50_Q36428 Cluster: NADH-ubiquinone oxidoreductase chain 5;... 45 4e-04
UniRef50_Q85JU6 Cluster: NADH dehydrogenase 5; n=1; Pelecinus po... 44 9e-04
UniRef50_A7E1Q1 Cluster: NADH dehydrogenase subunit 5; n=1; Ache... 44 9e-04
UniRef50_Q8SG54 Cluster: NADH dehydrogenase subunit 5; n=1; Vill... 39 0.025
UniRef50_Q6SKZ8 Cluster: NADH-ubiquinone oxidoreductase chain 5;... 39 0.033
UniRef50_Q6TUZ9 Cluster: 11L; n=1; Yaba monkey tumor virus|Rep: ... 37 0.10
UniRef50_Q6SKY5 Cluster: NADH-ubiquinone oxidoreductase chain 5;... 37 0.10
UniRef50_A0MCU4 Cluster: NADH-ubiquinone oxidoreductase chain 5;... 37 0.10
UniRef50_A7BG53 Cluster: NADH dehydrogenase subunit 5; n=14; Pro... 36 0.31
UniRef50_A1YWB9 Cluster: NADH-ubiquinone oxidoreductase chain 5;... 36 0.31
UniRef50_Q94RE8 Cluster: NADH-ubiquinone oxidoreductase chain 5;... 35 0.41
UniRef50_Q6UKF7 Cluster: NADH-ubiquinone oxidoreductase chain 5;... 33 1.3
UniRef50_Q06RF9 Cluster: NADH-ubiquinone oxidoreductase chain 5;... 33 1.3
UniRef50_A3QN80 Cluster: NADH dehydrogenase subunit 5; n=1; Euch... 33 1.7
UniRef50_A0MG43 Cluster: NADH-ubiquinone oxidoreductase chain 5;... 33 1.7
UniRef50_Q85KH3 Cluster: NADH dehydrogenase 5; n=1; Schlettereri... 33 2.2
UniRef50_Q6UNW1 Cluster: NADH-ubiquinone oxidoreductase chain 5;... 32 2.9
UniRef50_Q34843 Cluster: NADH-ubiquinone oxidoreductase chain 5;... 32 2.9
UniRef50_Q25809 Cluster: Rps3 protein; n=2; Plasmodium|Rep: Rps3... 32 2.9
UniRef50_Q0QJ92 Cluster: NADH-ubiquinone oxidoreductase chain 5;... 32 2.9
UniRef50_P21421 Cluster: DNA-directed RNA polymerase subunit bet... 32 2.9
UniRef50_Q14KG8 Cluster: Hypothetical transmembrane protein; n=1... 32 3.8
UniRef50_A6TSE3 Cluster: Auxin Efflux Carrier; n=1; Alkaliphilus... 32 3.8
UniRef50_A3QU30 Cluster: NADH-ubiquinone oxidoreductase chain 5;... 32 3.8
UniRef50_A3QNA7 Cluster: NADH dehydrogenase subunit 5; n=28; Acr... 32 3.8
UniRef50_Q65Z29 Cluster: NADH-ubiquinone oxidoreductase chain 5;... 31 5.0
UniRef50_Q5FYG4 Cluster: NADH-ubiquinone oxidoreductase chain 5;... 31 5.0
UniRef50_Q2ABI2 Cluster: NADH-ubiquinone oxidoreductase chain 5;... 31 5.0
UniRef50_Q09TF5 Cluster: NADH-ubiquinone oxidoreductase chain 5;... 31 6.7
UniRef50_Q4Y0U3 Cluster: Ubiquitin-conjugating enzyme, putative;... 31 8.8
UniRef50_Q25802 Cluster: RpoD protein; n=2; Plasmodium|Rep: RpoD... 31 8.8
>UniRef50_P18932 Cluster: NADH-ubiquinone oxidoreductase chain 5;
n=143; Neoptera|Rep: NADH-ubiquinone oxidoreductase
chain 5 - Drosophila melanogaster (Fruit fly)
Length = 572
Score = 74.1 bits (174), Expect = 7e-13
Identities = 33/99 (33%), Positives = 59/99 (59%)
Frame = +1
Query: 1 MVIYVSILGSILGFMVRNMGIYSLNKLLLRYNLRSFLCLI*FIPNLSTYGLNYIYLNFRQ 180
+ ++V I+G + G+++ ++ LNK L YNL +FL + F+P +STYG+ + LN+ Q
Sbjct: 455 LTLFVCIVGGLFGYLISLSNLFFLNKSLFMYNLSTFLGSMWFMPYISTYGMIFYPLNYGQ 514
Query: 181 ILFKNIDIGWREIYRGKGIFNILKNYSVFYNIYQINNFK 297
++ K+ D GW E + G+ ++ L YS + N+ K
Sbjct: 515 LVVKSFDQGWSEYFGGQHLYQKLSMYSKTLFLMHNNSLK 553
>UniRef50_P34854 Cluster: NADH-ubiquinone oxidoreductase chain 5;
n=1332; Arthropoda|Rep: NADH-ubiquinone oxidoreductase
chain 5 - Anopheles gambiae (African malaria mosquito)
Length = 580
Score = 68.5 bits (160), Expect = 4e-11
Identities = 30/99 (30%), Positives = 59/99 (59%)
Frame = +1
Query: 1 MVIYVSILGSILGFMVRNMGIYSLNKLLLRYNLRSFLCLI*FIPNLSTYGLNYIYLNFRQ 180
+ ++V I+G ++G+++ ++ ++ NK L YN +F+ + F+P +ST G+ L
Sbjct: 461 LTLFVCIVGGLMGYLISDVKLFFTNKALYFYNFTNFVGSMWFMPVISTLGVINYPLKLGL 520
Query: 181 ILFKNIDIGWREIYRGKGIFNILKNYSVFYNIYQINNFK 297
+K+ D GW E + G+ ++ LKNYS++ +Q N+ K
Sbjct: 521 YSYKSFDQGWSEFFGGQMVYFQLKNYSLYLQEFQSNSLK 559
>UniRef50_Q8SG50 Cluster: NADH dehydrogenase subunit 5; n=1;
Chironomus sp. LRC-2002|Rep: NADH dehydrogenase subunit
5 - Chironomus sp. LRC-2002
Length = 208
Score = 66.5 bits (155), Expect = 1e-10
Identities = 33/99 (33%), Positives = 52/99 (52%)
Frame = +1
Query: 1 MVIYVSILGSILGFMVRNMGIYSLNKLLLRYNLRSFLCLI*FIPNLSTYGLNYIYLNFRQ 180
+ + + +G + G+++ N+ +S NK L Y + F + F+P+LST G+ +N
Sbjct: 90 LTLMICFIGGVAGYLISNINFFSFNKSLNYYLVSFFSSSMWFMPSLSTIGVVKHPINLSF 149
Query: 181 ILFKNIDIGWREIYRGKGIFNILKNYSVFYNIYQINNFK 297
LFKN+D GW E + + IF I N S Q NN K
Sbjct: 150 KLFKNLDQGWFEFFGIQQIFKIFMNVSSIIQFIQFNNLK 188
>UniRef50_Q8SG46 Cluster: NADH dehydrogenase subunit 5; n=1;
Gasterophilus sp. LRC-2002|Rep: NADH dehydrogenase
subunit 5 - Gasterophilus sp. LRC-2002
Length = 166
Score = 66.1 bits (154), Expect = 2e-10
Identities = 32/98 (32%), Positives = 55/98 (56%)
Frame = +1
Query: 1 MVIYVSILGSILGFMVRNMGIYSLNKLLLRYNLRSFLCLI*FIPNLSTYGLNYIYLNFRQ 180
+ ++V I+G ++G+M+ ++ +Y NK L Y+ +FL + F+P +STYG+ L +
Sbjct: 46 LTLFVCIIGGLMGYMMSHVSLYFFNKSLFCYSSTNFLGSMWFMPYISTYGIISGPLIMGE 105
Query: 181 ILFKNIDIGWREIYRGKGIFNILKNYSVFYNIYQINNF 294
+FK D GW E + G+ +F L + YQ N F
Sbjct: 106 SIFKGFDHGWSEYFGGQQLFKKLIENLKLISCYQDNKF 143
>UniRef50_Q2QC27 Cluster: NADH dehydrogenase subunit 5; n=66;
Polyphaga|Rep: NADH dehydrogenase subunit 5 -
Metriorrhynchus sp. UPOL 000170
Length = 340
Score = 66.1 bits (154), Expect = 2e-10
Identities = 34/99 (34%), Positives = 51/99 (51%)
Frame = +1
Query: 1 MVIYVSILGSILGFMVRNMGIYSLNKLLLRYNLRSFLCLI*FIPNLSTYGLNYIYLNFRQ 180
MV++ I G ILG+ + N+G +K L+ Y + F + + LST+G+ Y +L+F
Sbjct: 227 MVLFTIIFGGILGYYISNIGFNDYSKTLIFYKMSYFFSSMWNLSYLSTFGVIYYFLSFGD 286
Query: 181 ILFKNIDIGWREIYRGKGIFNILKNYSVFYNIYQINNFK 297
ID GW E Y ++ LKN S F +NN K
Sbjct: 287 KFNSYIDQGWSEYYGSMNLYYSLKNTSFFMQKIFLNNVK 325
>UniRef50_Q36428 Cluster: NADH-ubiquinone oxidoreductase chain 5;
n=552; Mandibulata|Rep: NADH-ubiquinone oxidoreductase
chain 5 - Locusta migratoria (Migratory locust)
Length = 572
Score = 45.2 bits (102), Expect = 4e-04
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Frame = +1
Query: 1 MVIYVSILGSILGFMVRNMGIYSLNKLLLRY-NLRSFLCLI*FIPNLSTYGLNYIYLNFR 177
+ + ILGS G+++ + +YS L + + F + F+P LST ++Y+ L+F
Sbjct: 455 LTLLTIILGSYFGYVISDF-VYSYELFSLNFLSFVMFTGSMWFMPFLSTNYVSYLPLSFG 513
Query: 178 QILFKNIDIGWREIYRGKGIFNILKNYSVFYNIYQINNFK 297
K+ D GW E+ G+G+++ + +NFK
Sbjct: 514 YYSLKSFDSGWGELLGGQGLYSFFVYLINYIQSLYDSNFK 553
>UniRef50_Q85JU6 Cluster: NADH dehydrogenase 5; n=1; Pelecinus
polyturator|Rep: NADH dehydrogenase 5 - Pelecinus
polyturator
Length = 196
Score = 44.0 bits (99), Expect = 9e-04
Identities = 30/96 (31%), Positives = 54/96 (56%)
Frame = +1
Query: 1 MVIYVSILGSILGFMVRNMGIYSLNKLLLRYNLRSFLCLI*FIPNLSTYGLNYIYLNFRQ 180
++ Y+ ++G ++G++ + LNK L Y +L + ++ L+ Y + I++ +
Sbjct: 93 VIFYIMLMGVLIGYLN-----FKLNKNLKLY---LYLVSMSYLVYLNQYMMK-IFIILSK 143
Query: 181 ILFKNIDIGWREIYRGKGIFNILKNYSVFYNIYQIN 288
+LFK ID GW EI+ GI ++ NY F IYQ+N
Sbjct: 144 MLFKYIDKGWNEIFGKSGILKLM-NY--FNLIYQMN 176
>UniRef50_A7E1Q1 Cluster: NADH dehydrogenase subunit 5; n=1; Achelia
bituberculata|Rep: NADH dehydrogenase subunit 5 -
Achelia bituberculata
Length = 568
Score = 44.0 bits (99), Expect = 9e-04
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Frame = +1
Query: 1 MVIYVSILGSILGFMVRNMGIYSLNKLLLRYNLRSF-LCLI*FIPNLSTYGLNYIY-LNF 174
++ + I G ILG M+ NM + L + + N+ ++ L + FI ST L +Y L +
Sbjct: 453 LIFLIFIFGIILGLMMSNM-LMVLQLMKVNNNMMTYYLSQMWFISACSTQ-LTMMYPLFW 510
Query: 175 RQILFKNIDIGWREIYRGKGIFNILKNYSVFYNIYQINN 291
+ L K D+GW E Y G+G+F L N S N +++ N
Sbjct: 511 SKNLMKMFDMGWGEYYGGQGLFKTL-NLSSNLNNFKLYN 548
>UniRef50_Q8SG54 Cluster: NADH dehydrogenase subunit 5; n=1; Villa
sp. LRC-2002|Rep: NADH dehydrogenase subunit 5 - Villa
sp. LRC-2002
Length = 166
Score = 39.1 bits (87), Expect = 0.025
Identities = 22/99 (22%), Positives = 42/99 (42%)
Frame = +1
Query: 1 MVIYVSILGSILGFMVRNMGIYSLNKLLLRYNLRSFLCLI*FIPNLSTYGLNYIYLNFRQ 180
+ + V I+G +G+ V N ++ NK + F+ + P + + G+
Sbjct: 48 LTLGVCIMGGXMGYXVSNXSLFYYNKSFKIHXXTFFMGSMWXXPFIXSXGIIXGPFKLGD 107
Query: 181 ILFKNIDIGWREIYRGKGIFNILKNYSVFYNIYQINNFK 297
K+ D GW ++ G+ I+ + S+ Q NN K
Sbjct: 108 YSIKSFDQGWSXLFGGQMIYTEIVKLSILSQTIQNNNLK 146
>UniRef50_Q6SKZ8 Cluster: NADH-ubiquinone oxidoreductase chain 5;
n=1; Hutchinsoniella macracantha|Rep: NADH-ubiquinone
oxidoreductase chain 5 - Hutchinsoniella macracantha
Length = 578
Score = 38.7 bits (86), Expect = 0.033
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
Frame = +1
Query: 7 IYVSILGSILGFMVRNMGIYSLNKLLLRYNLRSFLCLI*FIPNL--STYGLNYIYLNFRQ 180
++ ILG +LG ++ N+ S L ++N L + + ST +N L+
Sbjct: 463 LFTIILGMLLGLILSNINQKSNMNLYKKFNKYKDLSNTMWFMKIISSTITINKP-LHLGN 521
Query: 181 ILFKNIDIGWREIYRGKGIFNILKNYSVFYNIYQINNFK 297
L + GW E+Y +G +NIL S YQ+NN K
Sbjct: 522 NLNHIYEKGWAELYGPQGTYNILTKTSANMQTYQMNNLK 560
>UniRef50_Q6TUZ9 Cluster: 11L; n=1; Yaba monkey tumor virus|Rep: 11L
- Yaba monkey tumor virus (YMTV)
Length = 637
Score = 37.1 bits (82), Expect = 0.10
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Frame = +1
Query: 67 SLNKLLLRYNLRSFLCL-I*FIPNLSTYGLNYIYLN--FRQI-LFKNIDIGWREIYRGKG 234
S N L+L+ ++ L L F N Y Y ++N R+I + KN+ IG YR
Sbjct: 496 SCNNLMLKKSIMYMLLLDSSFYVNDKRYICMYKFINECIREINVIKNVKIG----YRNYS 551
Query: 235 IFNILKNYSVFYNIYQINN 291
IFNILKNY++ + I+N
Sbjct: 552 IFNILKNYNINLAVDYIDN 570
>UniRef50_Q6SKY5 Cluster: NADH-ubiquinone oxidoreductase chain 5;
n=1; Speleonectes tulumensis|Rep: NADH-ubiquinone
oxidoreductase chain 5 - Speleonectes tulumensis
Length = 564
Score = 37.1 bits (82), Expect = 0.10
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Frame = +1
Query: 1 MVIYVSILGSILGFMVRNMGIYSLNKLLLRY-NLRSFLCLI*FIPNLSTYGLNYIYLNFR 177
+V+ V G +G++ N + N + Y + +F + F+ L++ G+ Y N
Sbjct: 451 LVMCVLFFGMWVGYLFLN---FRDNYVAFNYIKVNAFFGTLWFMKYLTSSGMIYFPFNLG 507
Query: 178 QILFKNIDIGWREIYRGKGIFNILKNYSVFYNIYQIN 288
LFK D+GW E Y G+G++ N F Q N
Sbjct: 508 GGLFKVSDLGWFEKYGGQGLYMGFYNGFGFIRYIQEN 544
>UniRef50_A0MCU4 Cluster: NADH-ubiquinone oxidoreductase chain 5;
n=1; Priapulus caudatus|Rep: NADH-ubiquinone
oxidoreductase chain 5 - Priapulus caudatus
Length = 561
Score = 37.1 bits (82), Expect = 0.10
Identities = 24/100 (24%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Frame = +1
Query: 1 MVIYVSILGSILGFMVR-NMGIYSLNKLLLRYNLRSFLCLI*FIPNLSTYGLNYIYLNFR 177
++I + ILG +GF + + + +K L + FL + F P+L+ + L
Sbjct: 461 LIIMILILGGWMGFTLNCSTSEHMKSKSLSFFPSSFFLSSMWFFPSLTGITSSNP-LKTG 519
Query: 178 QILFKNIDIGWREIYRGKGIFNILKNYSVFYNIYQINNFK 297
++FK +D+GW E+ +G+ + ++ I +N+ K
Sbjct: 520 SLIFKTLDLGWFELIGAQGLKTLTTKINMISQIMLLNSIK 559
>UniRef50_A7BG53 Cluster: NADH dehydrogenase subunit 5; n=14;
Protostomia|Rep: NADH dehydrogenase subunit 5 - Sepia
esculenta (golden cuttlefish)
Length = 591
Score = 35.5 bits (78), Expect = 0.31
Identities = 24/78 (30%), Positives = 42/78 (53%)
Frame = +1
Query: 19 ILGSILGFMVRNMGIYSLNKLLLRYNLRSFLCLI*FIPNLSTYGLNYIYLNFRQILFKNI 198
I+ I+ F + + + +NK +++Y S L FI N S N+I ++ + K +
Sbjct: 464 IISIIISFGLWDKDLLLVNKGIMKYMNSSMWFLSSFICNFSIK--NFILVSNSSL--KIL 519
Query: 199 DIGWREIYRGKGIFNILK 252
D+GW EI G+G+F + K
Sbjct: 520 DMGWMEILGGQGMFQMNK 537
>UniRef50_A1YWB9 Cluster: NADH-ubiquinone oxidoreductase chain 5;
n=2; Protostomia|Rep: NADH-ubiquinone oxidoreductase
chain 5 - Cephalothrix rufifrons
Length = 577
Score = 35.5 bits (78), Expect = 0.31
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Frame = +1
Query: 7 IYVSILGSILGFMVRN-MGIYSLNKL-LLRYNLRSFLCLI*FIPNLSTYGLNYIYLNFRQ 180
++ +I G ILG+ + N + ++S + L Y+ S L+ LST + Y L
Sbjct: 461 LFSTITGGILGWQISNSVNVFSKSNFSLFGYSSVSMWYLV----YLSTQYIIYFPLKLSF 516
Query: 181 ILFKNIDIGWREIYRGKGIFNILKNYSVFYNIYQ 282
+D GW EI+ GKG+ I K S + +Q
Sbjct: 517 NFLYFLDRGWNEIFGGKGLGLITKQSSSYVISWQ 550
>UniRef50_Q94RE8 Cluster: NADH-ubiquinone oxidoreductase chain 5;
n=10; Mandibulata|Rep: NADH-ubiquinone oxidoreductase
chain 5 - Lithobius forficatus
Length = 569
Score = 35.1 bits (77), Expect = 0.41
Identities = 26/99 (26%), Positives = 46/99 (46%)
Frame = +1
Query: 1 MVIYVSILGSILGFMVRNMGIYSLNKLLLRYNLRSFLCLI*FIPNLSTYGLNYIYLNFRQ 180
+++ + +LG LG M+ N Y + +RY F + F+P +S ++
Sbjct: 458 LILIMVMLGVYLGMMI-NWNDYGV----IRYFGTMFGGMW-FLPYVSGQVSGLFFVKLGS 511
Query: 181 ILFKNIDIGWREIYRGKGIFNILKNYSVFYNIYQINNFK 297
+ FK D GW E G+G +N L ++S + N+ K
Sbjct: 512 LSFKVNDYGWGECLGGEGAYNTLTSFSSMNQRIRTNSLK 550
>UniRef50_Q6UKF7 Cluster: NADH-ubiquinone oxidoreductase chain 5;
n=2; Protostomia|Rep: NADH-ubiquinone oxidoreductase
chain 5 - Phoronis psammophila
Length = 577
Score = 33.5 bits (73), Expect = 1.3
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Frame = +1
Query: 4 VIYVSILGS--ILGFMVRNMGIYSLNKLLLRYN--LRSFLCLI*FIPNLSTYGLNYIYLN 171
++ +S LG +L M+ +S + L+ ++ L + L + F+ L Y+ L+
Sbjct: 459 MLIISSLGLTLLLILMLEKYIFFSKSTLMSGFSNLLSNSLSSMWFLSILFGKSATYLGLS 518
Query: 172 FRQILFKNIDIGWREIYRGKGIFNILKNY 258
IL K D GW EI+ G+G F++ K +
Sbjct: 519 SSFILMKVSDQGWSEIFGGQGAFSLSKTF 547
>UniRef50_Q06RF9 Cluster: NADH-ubiquinone oxidoreductase chain 5;
n=1; Scutigerella causeyae|Rep: NADH-ubiquinone
oxidoreductase chain 5 - Scutigerella causeyae
Length = 556
Score = 33.5 bits (73), Expect = 1.3
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Frame = +1
Query: 61 IYSLNKLLLRYNLRSFLCLI*FIPNLSTYGLNYIYLNFRQILFKNIDIGWREIYRGKGIF 240
I +N L++ F+ + F+P +S G+ +I D+GW E+ GKG F
Sbjct: 461 IGGMNSSELKFGFDKFVGDMWFLPKISAQGIINSPFFLSKIYMSVNDMGWNELVGGKGTF 520
Query: 241 ----NILKNYSVFYNI 276
N+ KN Y++
Sbjct: 521 IGTSNLGKNLMSIYDM 536
>UniRef50_A3QN80 Cluster: NADH dehydrogenase subunit 5; n=1;
Euchorthippus pulvinatus|Rep: NADH dehydrogenase subunit
5 - Euchorthippus pulvinatus
Length = 134
Score = 33.1 bits (72), Expect = 1.7
Identities = 20/58 (34%), Positives = 32/58 (55%)
Frame = +1
Query: 1 MVIYVSILGSILGFMVRNMGIYSLNKLLLRYNLRSFLCLI*FIPNLSTYGLNYIYLNF 174
+ I V ILGS LG+ + N+ S L ++ SF + F+P +ST ++Y L+F
Sbjct: 77 LTILVVILGSYLGYCISNINFSSDLFSLSMFSFISFSGSMWFMPYISTNLISYFPLSF 134
>UniRef50_A0MG43 Cluster: NADH-ubiquinone oxidoreductase chain 5;
n=1; Nymphon gracile|Rep: NADH-ubiquinone oxidoreductase
chain 5 - Nymphon gracile
Length = 558
Score = 33.1 bits (72), Expect = 1.7
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 9/79 (11%)
Frame = +1
Query: 85 LRYNLRS-FLCLI*FIPNLSTYGLNYIYLNFRQILFKNIDIGWREIY--RGKGIFNILK- 252
L++NL + F + FI S +Y+ N N++ GW E Y RG G+F +
Sbjct: 471 LKFNLGNWFFGHMWFISFFSGQFFSYVIFNLSNFYILNLEQGWGEFYGPRGMGLFFLSMG 530
Query: 253 -----NYSVFYNIYQINNF 294
NY F Y +N F
Sbjct: 531 KFMNFNYFKFMEFYHLNFF 549
>UniRef50_Q85KH3 Cluster: NADH dehydrogenase 5; n=1; Schlettererius
cinctipes|Rep: NADH dehydrogenase 5 - Schlettererius
cinctipes
Length = 202
Score = 32.7 bits (71), Expect = 2.2
Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 133 NLSTYGLNYI-YLNFRQILFKNIDIGWREIYRGKGIFNILKNYSVFYNIYQINNF 294
N+ + + I L F + +K I+ GW E+Y G+G+ + ++ ++ NF
Sbjct: 131 NMDNFSIEVINILKFGNLYYKIIEKGWNELYSGQGVIYLYIYLMKYFMKFKYMNF 185
>UniRef50_Q6UNW1 Cluster: NADH-ubiquinone oxidoreductase chain 5;
n=2; Unionidae|Rep: NADH-ubiquinone oxidoreductase chain
5 - Lampsilis ornata
Length = 578
Score = 32.3 bits (70), Expect = 2.9
Identities = 24/91 (26%), Positives = 44/91 (48%)
Frame = +1
Query: 10 YVSILGSILGFMVRNMGIYSLNKLLLRYNLRSFLCLI*FIPNLSTYGLNYIYLNFRQILF 189
+V+ G + +V +G+ + K LL L FL + F+ +S ++ I L +
Sbjct: 464 FVTFSGLVY-LLVSLLGVLKVKKSLLE-GLSWFLSSMWFMNLVSGSLISGIGLKGGLSMH 521
Query: 190 KNIDIGWREIYRGKGIFNILKNYSVFYNIYQ 282
+D+GW E+ G+G +L + F+ I Q
Sbjct: 522 LCLDLGWMEVLGGQGTLKVLGKWISFFYIMQ 552
>UniRef50_Q34843 Cluster: NADH-ubiquinone oxidoreductase chain 5;
n=1; Katharina tunicata|Rep: NADH-ubiquinone
oxidoreductase chain 5 - Katharina tunicata (Black
chiton)
Length = 571
Score = 32.3 bits (70), Expect = 2.9
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Frame = +1
Query: 64 YSLNKLLLRYN---LRSFLCLI*FIPNLSTYGLNYIYLNFRQILFKNIDIGWREIYRGKG 234
Y L KL L+ + + +F + F+ NLS + L FK++D+GW E G+G
Sbjct: 471 YKLFKLELKISHSIINNFFFNMWFMINLSNNMTSKSSLYTGLYTFKSLDLGWMETIGGEG 530
Query: 235 IFNILKNYSVFYNIYQINNF 294
+ N + + Q N F
Sbjct: 531 LLNKIMTLTTINQKNQSNLF 550
>UniRef50_Q25809 Cluster: Rps3 protein; n=2; Plasmodium|Rep: Rps3
protein - Plasmodium falciparum
Length = 214
Score = 32.3 bits (70), Expect = 2.9
Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Frame = +1
Query: 166 LNFRQILFKN-IDIGWREIYRGKG-IFNILKNYSVFYNIYQINNFK 297
L FR +++KN ++ + I + K + NIL Y ++YN+Y+I N+K
Sbjct: 8 LIFRGLIYKNYLNNFYINISKNKYYLINILLTYFIYYNMYRICNYK 53
>UniRef50_Q0QJ92 Cluster: NADH-ubiquinone oxidoreductase chain 5;
n=1; Xenos vesparum|Rep: NADH-ubiquinone oxidoreductase
chain 5 - Xenos vesparum
Length = 540
Score = 32.3 bits (70), Expect = 2.9
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +1
Query: 145 YGLNYIYLNFRQILFKNIDIGWREIYRGKGIFNILKNYSVFYNIYQINNFK 297
Y +N + NF +K I+ GW E+ G GI+ ++ FY+ Q N +
Sbjct: 480 YYMNIFFYNF----YKFIEKGWAEVLIGPGIYKNYGVFTFFYSYSQANKLQ 526
>UniRef50_P21421 Cluster: DNA-directed RNA polymerase subunit beta;
n=5; Plasmodium|Rep: DNA-directed RNA polymerase subunit
beta - Plasmodium falciparum
Length = 1024
Score = 32.3 bits (70), Expect = 2.9
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 145 YGLNYIYLNFRQILFKNIDIGWREIYRGKGIFNILK-NYSVFYNI 276
YGLN +YLN R I+ N++ + Y IFN K NY+ +NI
Sbjct: 822 YGLNSLYLNTRYIISNNLNKNYYNNY--NHIFNYYKYNYNNNFNI 864
>UniRef50_Q14KG8 Cluster: Hypothetical transmembrane protein; n=1;
Spiroplasma citri|Rep: Hypothetical transmembrane
protein - Spiroplasma citri
Length = 405
Score = 31.9 bits (69), Expect = 3.8
Identities = 21/89 (23%), Positives = 45/89 (50%)
Frame = +1
Query: 19 ILGSILGFMVRNMGIYSLNKLLLRYNLRSFLCLI*FIPNLSTYGLNYIYLNFRQILFKNI 198
I+GS++ ++ + Y L +L + +L+ + L+ I N S N+ + +I FK
Sbjct: 138 IVGSVVTIIIPFLLQYFLTELTTKISLQGYFSLLALI-NFSLIFFNHD-IQTEEITFKIN 195
Query: 199 DIGWREIYRGKGIFNILKNYSVFYNIYQI 285
W+ + + K ++ L + S Y+I ++
Sbjct: 196 PSSWKILQKNKQFWSYLYSSSFLYSINEV 224
>UniRef50_A6TSE3 Cluster: Auxin Efflux Carrier; n=1; Alkaliphilus
metalliredigens QYMF|Rep: Auxin Efflux Carrier -
Alkaliphilus metalliredigens QYMF
Length = 298
Score = 31.9 bits (69), Expect = 3.8
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +1
Query: 61 IYSLNKLLLRY--NLRSFLCLI*FIPNLSTYGLNYIYLNFRQILFK 192
+Y +N LL+Y N+RS L L PN YGL + F I F+
Sbjct: 75 VYMVNHFLLKYPQNMRSPLLLSTVFPNTGNYGLPIVLFAFGNIGFE 120
>UniRef50_A3QU30 Cluster: NADH-ubiquinone oxidoreductase chain 5;
n=1; Epiperipatus biolleyi|Rep: NADH-ubiquinone
oxidoreductase chain 5 - Epiperipatus biolleyi
Length = 559
Score = 31.9 bits (69), Expect = 3.8
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +1
Query: 124 FIPNLSTYGLNYIYLNFRQILFKNIDIGWREIYRGKGIFNILKNYSVFYNIYQINNFK 297
F P +S+ +++ + F+N+DI W E+ +G F +L S Q N+ K
Sbjct: 486 FFPKISSQIFLNFMMSWSKFSFENVDISWVEMLGLQGTFKVLVYSSKILQSIQKNSIK 543
>UniRef50_A3QNA7 Cluster: NADH dehydrogenase subunit 5; n=28;
Acrididae|Rep: NADH dehydrogenase subunit 5 - Ptygonotus
gansuensis
Length = 211
Score = 31.9 bits (69), Expect = 3.8
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +1
Query: 1 MVIYVSILGSILGFMVRNMGI-YSLNKLLLRYNLRSFLCLI*FIPNLSTYGLNYIYLNF 174
+ I+V ILGS LG+ + N+ + L L + + SF + F+P LST ++Y+ L+F
Sbjct: 150 LTIFVVILGSYLGYYIFNVNFSHDLFSLSI-LSFVSFSGSMWFMPYLSTNFISYLPLSF 207
>UniRef50_Q65Z29 Cluster: NADH-ubiquinone oxidoreductase chain 5;
n=3; Bilateria|Rep: NADH-ubiquinone oxidoreductase chain
5 - Caenorhabditis elegans
Length = 567
Score = 31.5 bits (68), Expect = 5.0
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 124 FIPNLSTYGLNYIYLNFRQILFKNIDIGWREIYRGKGIFNILKNYSV 264
F+P +S+ L Y+ L + D+GW E+ G+G L NYS+
Sbjct: 494 FLPYISSQPLVYLPLTAGGAVSSLGDLGWLELLGGQGANKSLMNYSL 540
>UniRef50_Q5FYG4 Cluster: NADH-ubiquinone oxidoreductase chain 5;
n=1; Homalodisca coagulata|Rep: NADH-ubiquinone
oxidoreductase chain 5 - Homalodisca coagulata
(Glassy-winged sharpshooter)
Length = 559
Score = 31.5 bits (68), Expect = 5.0
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +1
Query: 136 LSTYGLNYIYLNFRQIL--FKNIDIGWREIYRGKGIFNILKNYSVFYNIYQINNFK 297
+S+Y LN++Y N K+ + W E Y GI L N S F Y +NN K
Sbjct: 491 MSSY-LNFLYKNVYLFSENSKSNSLMWSEYYGPMGISYYLLNLSNFIQFYSMNNLK 545
>UniRef50_Q2ABI2 Cluster: NADH-ubiquinone oxidoreductase chain 5;
n=8; Neocoleoidea|Rep: NADH-ubiquinone oxidoreductase
chain 5 - Sepia officinalis (Common cuttlefish)
Length = 567
Score = 31.5 bits (68), Expect = 5.0
Identities = 20/81 (24%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +1
Query: 1 MVIYVSILGSILGFMVRNMGIYSLNKLLLRYNLRSFL-CLI*FIPNLSTYGLNYIYLNFR 177
M +YV +L I+ +V + G++ N L++ + +L + F+ + + +
Sbjct: 455 MKLYVPVL--IILSVVMSFGLWGKNNSLIKSSFVKYLNSSMWFLSSFICLPMISSFKLVS 512
Query: 178 QILFKNIDIGWREIYRGKGIF 240
K +D+GW EI+ G+G+F
Sbjct: 513 NSSLKVVDMGWMEIFGGQGLF 533
>UniRef50_Q09TF5 Cluster: NADH-ubiquinone oxidoreductase chain 5;
n=2; Isopoda|Rep: NADH-ubiquinone oxidoreductase chain 5
- Ligia oceanica (common sea slater)
Length = 554
Score = 31.1 bits (67), Expect = 6.7
Identities = 22/99 (22%), Positives = 47/99 (47%)
Frame = +1
Query: 1 MVIYVSILGSILGFMVRNMGIYSLNKLLLRYNLRSFLCLI*FIPNLSTYGLNYIYLNFRQ 180
+ + +++G + G ++ + ++ + L ++ + ++P LS G + F+
Sbjct: 440 LALVSTVMGGVAGVIMYYLKFKGAG-MMKKLMLVTYFMQMWYLPFLSGQGASKSMNLFKH 498
Query: 181 ILFKNIDIGWREIYRGKGIFNILKNYSVFYNIYQINNFK 297
+ K +D+GW E+ G+G+ N L S I Q N K
Sbjct: 499 L--KLVDLGWGEMLGGQGLNNSLMVSSKGLVIMQSNKIK 535
>UniRef50_Q4Y0U3 Cluster: Ubiquitin-conjugating enzyme, putative;
n=2; Plasmodium (Vinckeia)|Rep: Ubiquitin-conjugating
enzyme, putative - Plasmodium chabaudi
Length = 226
Score = 30.7 bits (66), Expect = 8.8
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +1
Query: 157 YIYLNFRQILFKNIDIGWREIYRGKGIFNILKNYSVFYNIYQINNFK 297
Y+Y + FKNI I +++Y GK ILK+Y FYN + N +K
Sbjct: 89 YLYNEIHGVYFKNIKITTKKVY-GKIYKTILKSY--FYNFVK-NKWK 131
>UniRef50_Q25802 Cluster: RpoD protein; n=2; Plasmodium|Rep: RpoD
protein - Plasmodium falciparum
Length = 960
Score = 30.7 bits (66), Expect = 8.8
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 13/110 (11%)
Frame = +1
Query: 1 MVIYVSILGSILGFMVRNMGIYSLNKLLLRYNLRSFLCL--------I*FIPNLSTYGLN 156
+ IY++I+ +I+ N Y+ NKL +FL L ++ + Y L
Sbjct: 558 LFIYLNIINNIIIKKYLNFYKYTYNKLFFIKKYNNFLYLYEIFKYNWYKYLLLNNKYNLY 617
Query: 157 YIYLNFRQILFK-NIDIGWREIYRGKGIF----NILKNYSVFYNIYQINN 291
IY N+ + L+K NI+I +Y K +F N + N+ ++ N Y I N
Sbjct: 618 IIYNNYIKYLYKYNINI---NLYFIKNLFYNNNNFIHNHIIYKNNYYIYN 664
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,465,265
Number of Sequences: 1657284
Number of extensions: 2067104
Number of successful extensions: 6574
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 6466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6569
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 13594373344
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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