Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt7c06
         (639 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           26   1.2  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    25   2.0  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = -1

Query: 201  CSALAIPPALYFPSISTQHRKITQYRTSFCSS 106
            CSA    PA   PS ST  R + +  TSF  S
Sbjct: 1305 CSASTSEPAPAAPSNSTPSRSVARIVTSFTDS 1336


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
            protein.
          Length = 1253

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = +3

Query: 354  DLIERHHTSHKTLELGVVLAKQVIKNEKVRELLQDNQETFDTVIAEWY 497
            DL  R   S KTL +     K + +  K+R+ +   Q  +D+    WY
Sbjct: 1102 DLGHRLTLSRKTLNVLDTRRKSMAEQRKIRKSIIRGQNPYDSAGDLWY 1149



 Score = 23.0 bits (47), Expect = 8.2
 Identities = 12/32 (37%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
 Frame = -3

Query: 385 LWLVWCLSIKSFTSNSW-PSSGRTVMTFSRFL 293
           LWL+W LS    T + W   S R   T   F+
Sbjct: 120 LWLLWLLSQTWITRHLWMAKSDRNASTEKLFV 151


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 659,300
Number of Sequences: 2352
Number of extensions: 12520
Number of successful extensions: 25
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)