Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt7c06
         (639 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78415-3|CAB01674.1|  530|Caenorhabditis elegans Hypothetical pr...    29   2.1  
AF047661-4|AAC04435.2|  931|Caenorhabditis elegans Hypothetical ...    29   2.1  
U64849-9|AAC48056.1|  405|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z71185-2|CAA94904.2|  522|Caenorhabditis elegans Hypothetical pr...    28   4.9  
AF003385-1|AAB54243.1|  884|Caenorhabditis elegans Hypothetical ...    28   4.9  
Z92808-1|CAB07266.2|  606|Caenorhabditis elegans Hypothetical pr...    28   6.5  
AF047661-2|AAK71389.1|  886|Caenorhabditis elegans Hypothetical ...    28   6.5  
AF047661-1|AAK71388.2|  915|Caenorhabditis elegans Hypothetical ...    28   6.5  
AC025716-15|AAO21409.1|  521|Caenorhabditis elegans Udp-glucuron...    28   6.5  
U88311-3|AAB42345.1|  526|Caenorhabditis elegans Udp-glucuronosy...    25   7.3  

>Z78415-3|CAB01674.1|  530|Caenorhabditis elegans Hypothetical
           protein C17G1.3a protein.
          Length = 530

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +3

Query: 207 HQQLTDSIVKTLLDAGHEVTYINRLTEMKRK 299
           H +   S+V TL+DAGH+VT +  + +  +K
Sbjct: 32  HIKFVGSVVDTLVDAGHDVTVVLPVIDSTQK 62


>AF047661-4|AAC04435.2|  931|Caenorhabditis elegans Hypothetical
           protein M70.1 protein.
          Length = 931

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 27/105 (25%), Positives = 48/105 (45%)
 Frame = +3

Query: 225 SIVKTLLDAGHEVTYINRLTEMKRKRLKVITVRPEDGQELDVNDLIERHHTSHKTLELGV 404
           S VK+++ A      + R     +K  ++I    + G  LD +  +E   T  + L+  V
Sbjct: 416 SHVKSVVTASQNSQLLERTLNAVKKISELIATS-KLGNSLD-SIPVETLKTFTRQLKSSV 473

Query: 405 VLAKQVIKNEKVRELLQDNQETFDTVIAEWYYTGLLAPLAAVFEC 539
            L    IKN +   LL    ++   +I E+   G++ P+  VF+C
Sbjct: 474 AL----IKNRETVALLATKLKSESDLIVEFKENGIVKPVIGVFDC 514


>U64849-9|AAC48056.1|  405|Caenorhabditis elegans Hypothetical
           protein K04A8.10 protein.
          Length = 405

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 16/52 (30%), Positives = 21/52 (40%)
 Frame = +3

Query: 117 MMFGTVLFFCAVCLCWGXXXXXXXXXXXXXHQQLTDSIVKTLLDAGHEVTYI 272
           M F  VLF   V LC+              H      I   L+DAG++VT +
Sbjct: 1   MKFPIVLFLILVELCFSYKVLVFNPAFGASHANFLGKISDILIDAGNDVTMV 52


>Z71185-2|CAA94904.2|  522|Caenorhabditis elegans Hypothetical
           protein C35A5.2 protein.
          Length = 522

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +3

Query: 207 HQQLTDSIVKTLLDAGHEVTYINRLTEMKRKRLKVI 314
           H +    I  TL DAGH VT++  +   K + +K +
Sbjct: 32  HHKFLAKIADTLTDAGHNVTFLAPIVLRKYENVKYL 67


>AF003385-1|AAB54243.1|  884|Caenorhabditis elegans Hypothetical
           protein R08F11.1 protein.
          Length = 884

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = +3

Query: 474 DTVIAEWYYTGLLAPLAAVFECPLIWYTACDASWMTSQ-LMLEQT 605
           D  + EWY + +   L  + +   +W+   D  W T + LM EQT
Sbjct: 428 DQKLPEWYKSAIFNELYYIVDGSTVWF-EYDPDWKTEESLMSEQT 471


>Z92808-1|CAB07266.2|  606|Caenorhabditis elegans Hypothetical
           protein M04C3.2 protein.
          Length = 606

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
 Frame = +3

Query: 264 TYINRLTEMKRKRLKVITVR--PEDGQELDVNDLIERHHTSHKTLELGVVLAKQVIKNEK 437
           ++ N+L ++  K  KV  V   PE+  E   ND +  +    KT     V    V+ N  
Sbjct: 70  SWTNKLQKLPSKCKKVPEVSEVPEECSENSQNDALSFYKLKRKTKSQDFVEEDIVLANYG 129

Query: 438 VRELLQDNQETFDTVI 485
           + E +Q+ + T++ +I
Sbjct: 130 LLETIQELKVTWERII 145


>AF047661-2|AAK71389.1|  886|Caenorhabditis elegans Hypothetical
           protein M70.3b protein.
          Length = 886

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 21/81 (25%), Positives = 38/81 (46%)
 Frame = +3

Query: 297 KRLKVITVRPEDGQELDVNDLIERHHTSHKTLELGVVLAKQVIKNEKVRELLQDNQETFD 476
           K++  +    + G  LD +  +E   T  + L+  V L    IKN +   LL    ++  
Sbjct: 429 KKISELIATSKLGNSLD-SIPVETLKTFTRQLKSSVAL----IKNRETVALLATKLKSES 483

Query: 477 TVIAEWYYTGLLAPLAAVFEC 539
            +I E+   G++ P+  VF+C
Sbjct: 484 DLIVEFKENGIVKPVIGVFDC 504


>AF047661-1|AAK71388.2|  915|Caenorhabditis elegans Hypothetical
           protein M70.3a protein.
          Length = 915

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 21/81 (25%), Positives = 38/81 (46%)
 Frame = +3

Query: 297 KRLKVITVRPEDGQELDVNDLIERHHTSHKTLELGVVLAKQVIKNEKVRELLQDNQETFD 476
           K++  +    + G  LD +  +E   T  + L+  V L    IKN +   LL    ++  
Sbjct: 458 KKISELIATSKLGNSLD-SIPVETLKTFTRQLKSSVAL----IKNRETVALLATKLKSES 512

Query: 477 TVIAEWYYTGLLAPLAAVFEC 539
            +I E+   G++ P+  VF+C
Sbjct: 513 DLIVEFKENGIVKPVIGVFDC 533


>AC025716-15|AAO21409.1|  521|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein31 protein.
          Length = 521

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = +3

Query: 207 HQQLTDSIVKTLLDAGHEVTYINRLTEMKRK 299
           H +   +I  TL +AGH VT++  + ++ R+
Sbjct: 30  HSKFMGNIADTLTEAGHNVTFLVSVADVTRR 60


>U88311-3|AAB42345.1|  526|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein27 protein.
          Length = 526

 Score = 24.6 bits (51), Expect(2) = 7.3
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +3

Query: 207 HQQLTDSIVKTLLDAGHEVTYINRLTEMKRKR 302
           H      +  TL +AGH VT++  + ++ R +
Sbjct: 32  HTNFMARLADTLTEAGHNVTFLVPIVDVARTK 63



 Score = 21.4 bits (43), Expect(2) = 7.3
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +3

Query: 384 KTLELGVVLAKQVIKNEKVRELLQDNQETFDTVIAEW 494
           +T +LGV +   VI  EK     Q++    D++ A W
Sbjct: 61  RTKQLGVHVTTDVIIVEKDEHTTQESVPFDDSMEAYW 97


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,235,307
Number of Sequences: 27780
Number of extensions: 287380
Number of successful extensions: 931
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 931
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)