Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt7b24
(626 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0843 + 25315089-25315417,25317274-25317310,25317439-253176... 84 1e-16
12_01_1059 - 10934937-10935446,10938224-10938271,10938383-109386... 83 2e-16
08_01_0404 - 3590296-3590409,3590529-3590819,3592414-3592461,359... 78 5e-15
02_05_1073 - 33895608-33895880,33896133-33896180,33896273-338965... 75 4e-14
01_06_0322 + 28472680-28473053,28474434-28474470,28474578-284748... 73 2e-13
02_01_0677 - 5039344-5039793,5040415-5040462,5040540-5040776,504... 66 2e-11
08_02_0090 - 12249919-12250158,12250826-12250927,12251046-122511... 29 2.3
03_02_0895 + 12230683-12230844,12230937-12230991,12231106-122311... 29 2.3
02_02_0675 + 12845980-12846111,12846211-12846363,12846954-128471... 29 4.0
01_05_0104 + 18148396-18148642,18148797-18148886,18148972-181490... 29 4.0
11_06_0707 + 26467214-26470309 27 9.2
05_05_0236 - 23517512-23517682,23519436-23519516,23519685-235198... 27 9.2
>06_03_0843 +
25315089-25315417,25317274-25317310,25317439-25317675,
25317745-25317792,25318144-25318577,25318675-25318759
Length = 389
Score = 83.8 bits (198), Expect = 1e-16
Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 1/133 (0%)
Frame = +1
Query: 226 IAAKLAFLPPEP-TYAFTPDETGSKFSLTLTERAEWQYSEREKENIEGFYSRTTRGNKIA 402
+AA+ AF PP P +Y P + S + + +E T RG ++
Sbjct: 8 VAARFAFFPPAPPSYGVEPPPSPSPAAAAEDGAVVELSGVPRRAGVEARRLPTGRGTEVV 67
Query: 403 CLFVRCSPNARFTILFSHGNAVDLGQMSSFYLGLGTRINCNIFXXXXXXXXXXXXKPSEK 582
++VR P AR T+L+SHGNA DLGQM ++ L + +N N+ KPSE+
Sbjct: 68 AMYVR-QPGARLTLLYSHGNAADLGQMYELFVELSSHLNVNLMGYDYSGYGQSSGKPSEQ 126
Query: 583 NLYADIDAAWQAL 621
N Y+DI+AA++ L
Sbjct: 127 NTYSDIEAAYRCL 139
>12_01_1059 -
10934937-10935446,10938224-10938271,10938383-10938619,
10938711-10938747,10941018-10941286
Length = 366
Score = 83.0 bits (196), Expect = 2e-16
Identities = 47/129 (36%), Positives = 67/129 (51%), Gaps = 1/129 (0%)
Frame = +1
Query: 238 LAFLPPEP-TYAFTPDETGSKFSLTLTERAEWQYSEREKENIEGFYSRTTRGNKIACLFV 414
+AF PP P +YA D ++T + +EN+E RT RGN +A ++V
Sbjct: 1 MAFFPPTPPSYALVDDPAAGVTTMT---------GQPHRENVEVLRLRTRRGNTVAAVYV 51
Query: 415 RCSPNARFTILFSHGNAVDLGQMSSFYLGLGTRINCNIFXXXXXXXXXXXXKPSEKNLYA 594
R P+A T+L+SHGNA DLG + +L L + N+ KPSE N YA
Sbjct: 52 R-HPDAATTLLYSHGNAADLGHLYQLFLHLSFNLRVNVLGYDYSGYGQSSGKPSEHNTYA 110
Query: 595 DIDAAWQAL 621
DI+AA++ L
Sbjct: 111 DIEAAYKCL 119
>08_01_0404 -
3590296-3590409,3590529-3590819,3592414-3592461,
3592559-3592795,3593668-3593704,3594311-3594627
Length = 347
Score = 78.2 bits (184), Expect = 5e-15
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 1/133 (0%)
Frame = +1
Query: 226 IAAKLAFLPPEP-TYAFTPDETGSKFSLTLTERAEWQYSEREKENIEGFYSRTTRGNKIA 402
+AA+ AF PPEP TYA DE + + ++ T +G+K+
Sbjct: 10 LAARFAFFPPEPATYAVRKDEACGGGGRLVASGVPRDAA------VDVLLVDTRKGSKVV 63
Query: 403 CLFVRCSPNARFTILFSHGNAVDLGQMSSFYLGLGTRINCNIFXXXXXXXXXXXXKPSEK 582
++R +P AR T+L+SHGNA DLGQ+ ++ L + N+ KPSE+
Sbjct: 64 AFYLR-NPAARLTVLYSHGNAADLGQLYDLFVQLKVNLKVNLMGYDYSGYGASTGKPSEE 122
Query: 583 NLYADIDAAWQAL 621
N YADI+A +Q L
Sbjct: 123 NTYADIEAVYQCL 135
>02_05_1073 -
33895608-33895880,33896133-33896180,33896273-33896509,
33897233-33897269,33898603-33898913
Length = 301
Score = 75.4 bits (177), Expect = 4e-14
Identities = 47/133 (35%), Positives = 61/133 (45%), Gaps = 1/133 (0%)
Frame = +1
Query: 226 IAAKLAFLPPEP-TYAFTPDETGSKFSLTLTERAEWQYSEREKENIEGFYSRTTRGNKIA 402
+AA+LAF PPEP TY +E G + +E T G ++
Sbjct: 8 VAARLAFFPPEPPTYELVAEEGGGGGGVVRMTGVS------ADAGVEVHALPTKGGTRVV 61
Query: 403 CLFVRCSPNARFTILFSHGNAVDLGQMSSFYLGLGTRINCNIFXXXXXXXXXXXXKPSEK 582
F R P+AR T+L+SHGNA DLGQM +L L + NI KPSE
Sbjct: 62 AAFWR-HPSARLTLLYSHGNAADLGQMLGLFLELRAHLRVNIMSYDYSGYGASTGKPSEY 120
Query: 583 NLYADIDAAWQAL 621
N Y DI+A + L
Sbjct: 121 NTYCDIEAVYDCL 133
>01_06_0322 +
28472680-28473053,28474434-28474470,28474578-28474814,
28474891-28474938,28475263-28475661
Length = 364
Score = 72.5 bits (170), Expect = 2e-13
Identities = 49/149 (32%), Positives = 70/149 (46%), Gaps = 16/149 (10%)
Frame = +1
Query: 226 IAAKLAFLPPEP-TYAFTPDETGSKFSLTLTERAEWQYSERE---------------KEN 357
IAA+ AF PP P +Y D + ++ R + R+ ++
Sbjct: 8 IAARFAFFPPTPPSYTVVADAATGRLAIPEISRPPARRRRRDGGGDASASGAAPAEDEDG 67
Query: 358 IEGFYSRTTRGNKIACLFVRCSPNARFTILFSHGNAVDLGQMSSFYLGLGTRINCNIFXX 537
E RT RGN+I + VR A T+L+SHGNA DLGQM ++ L R+ N+F
Sbjct: 68 TEVVRLRTRRGNEIVGVHVR-HERASATLLYSHGNAADLGQMYGLFVELSRRLRINLFGY 126
Query: 538 XXXXXXXXXXKPSEKNLYADIDAAWQALR 624
KP+E N YADI+AA+ L+
Sbjct: 127 DYSGYGRSTGKPTECNTYADIEAAYNCLK 155
>02_01_0677 -
5039344-5039793,5040415-5040462,5040540-5040776,
5040862-5040898,5042474-5042491,5042801-5043153
Length = 380
Score = 66.5 bits (155), Expect = 2e-11
Identities = 36/95 (37%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Frame = +1
Query: 355 NIEGFYSRTTRGNKIACLFVRCSPNARFTILFSHGNAVDLGQMSSFYLGLGTRINCNIF- 531
N+E RT RG ++ ++VR AR T+L+SHGNA DLGQM ++ L +N N+
Sbjct: 60 NVEARRLRTKRGTEVVAMYVR-QAGARLTLLYSHGNAADLGQMFELFVELSAHLNVNLMG 118
Query: 532 -----XXXXXXXXXXXXKPSEKNLYADIDAAWQAL 621
KPSE N YADI+A ++ L
Sbjct: 119 IRIRRLYDYSGYGQSSGKPSEHNTYADIEAVYRCL 153
>08_02_0090 -
12249919-12250158,12250826-12250927,12251046-12251135,
12251227-12251421
Length = 208
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/58 (25%), Positives = 24/58 (41%)
Frame = -1
Query: 356 FSFSRSEYCHSARSVSVKENFDPVSSGVNAYVGSGGRNANLAAIFPGHGGQQNRQQSS 183
F R E C S ++ + N +N + NLAA+FP H +Q ++
Sbjct: 41 FKHQRQEDCQSIQNALSEFNNQTKEYMINGSASTPPPQINLAALFPSHSSPTTQQNTT 98
>03_02_0895 +
12230683-12230844,12230937-12230991,12231106-12231169,
12231292-12231334,12231509-12231607,12231710-12231778,
12231912-12232245,12232317-12232471,12232592-12233287
Length = 558
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/77 (24%), Positives = 33/77 (42%)
Frame = -1
Query: 395 LLPLVVLE*KPSMFSFSRSEYCHSARSVSVKENFDPVSSGVNAYVGSGGRNANLAAIFPG 216
+L L+VL +P+ +R H + S K+ D + A GG A + A PG
Sbjct: 439 VLKLLVLIGRPAFMERARRVLGHERQESSSKQGHDQKPAVTRAGDDDGGAKAGVTAAKPG 498
Query: 215 HGGQQNRQQSSLKLNPF 165
+ ++++ PF
Sbjct: 499 KKKGSASKPAAVEFGPF 515
>02_02_0675 +
12845980-12846111,12846211-12846363,12846954-12847100,
12847372-12847656
Length = 238
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 280 DETGSKFSLTLTERAEWQYSEREKENIEGFY 372
DET SK + + R ++Q SE +E+++G Y
Sbjct: 85 DETVSKLTKAIKWRQDFQVSELSEESVKGLY 115
>01_05_0104 +
18148396-18148642,18148797-18148886,18148972-18149072,
18149174-18149287,18149381-18149462,18149592-18149659,
18149747-18149806,18149885-18150009,18150663-18150861,
18150942-18151073,18151152-18151244,18151360-18152244,
18152339-18152664,18153003-18153341,18153911-18153996,
18154054-18154139
Length = 1010
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 138 CSQTIPKQNERIKFQRTLLPVLLSAMPRKN 227
C++T PK N K +R LLP+ +S + R N
Sbjct: 596 CNETTPKSNRAKKKKRMLLPLGVSNINRPN 625
>11_06_0707 + 26467214-26470309
Length = 1031
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 301 SLTLTERAEWQYSEREKENIEGFYSRTTRGNKIACLFV 414
+L TE+ + YSE NIE + + T + + LFV
Sbjct: 727 NLDCTEQTDEAYSEENARNIEKIFEKLTPPHNLEDLFV 764
>05_05_0236 -
23517512-23517682,23519436-23519516,23519685-23519891,
23519987-23520164,23520250-23520284,23520725-23520826,
23520908-23520964,23521236-23521325
Length = 306
Score = 27.5 bits (58), Expect = 9.2
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Frame = -1
Query: 356 FSFSRSEYCHSAR---SVSVKENFDPVSSGVNAYVGSGGRNANLAAIFPGHGGQQNRQQS 186
F +E S+R SVS KENFD ++S + GS R+ + G +QQ
Sbjct: 61 FEVGATEVRRSSRARNSVSYKENFDELNSFLCRRRGSRIRSTEQGRDYTGRVASYEQQQR 120
Query: 185 SLK 177
+ K
Sbjct: 121 AFK 123
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,954,840
Number of Sequences: 37544
Number of extensions: 278648
Number of successful extensions: 708
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 703
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1525730988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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