Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt7b24
(626 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75712-10|CAB00039.2| 332|Caenorhabditis elegans Hypothetical p... 132 2e-31
Z95559-9|CAI46625.1| 510|Caenorhabditis elegans Hypothetical pr... 48 5e-06
Z81493-7|CAE46664.1| 342|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z81493-6|CAB04038.1| 335|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z47067-3|CAA87330.2| 446|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z81493-8|CAB04043.1| 305|Caenorhabditis elegans Hypothetical pr... 31 0.67
Z81061-3|CAB02933.1| 232|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z70308-1|CAA94351.1| 213|Caenorhabditis elegans Hypothetical pr... 28 6.3
U00052-2|AAK95881.1| 404|Caenorhabditis elegans Hypothetical pr... 28 6.3
AC006834-5|AAF40007.1| 451|Caenorhabditis elegans Hypothetical ... 28 6.3
U55363-8|AAA97966.1| 829|Caenorhabditis elegans Germinal center... 27 8.3
AF040655-7|AAB95044.2| 565|Caenorhabditis elegans Hypothetical ... 27 8.3
>Z75712-10|CAB00039.2| 332|Caenorhabditis elegans Hypothetical
protein K04G2.2 protein.
Length = 332
Score = 132 bits (319), Expect = 2e-31
Identities = 68/135 (50%), Positives = 86/135 (63%), Gaps = 2/135 (1%)
Frame = +1
Query: 226 IAAKLAFLPPEPTYAFTPDETGSKFSLTLTE-RAEWQYSEREKEN-IEGFYSRTTRGNKI 399
I +KLAF+PPEP+Y T D L L E RA W + E + N +E +RT R N++
Sbjct: 46 IVSKLAFMPPEPSYTITEDN-----KLVLIEGRAAWPHQEVDMANCVEMRITRTRRRNRV 100
Query: 400 ACLFVRCSPNARFTILFSHGNAVDLGQMSSFYLGLGTRINCNIFXXXXXXXXXXXXKPSE 579
AC +R PN+ FT+LFSHGNAVDLGQM+SF GLG +NCN+F KPSE
Sbjct: 101 ACTMIRPLPNSHFTLLFSHGNAVDLGQMTSFLYGLGFHLNCNVFSYDYSGYGCSTGKPSE 160
Query: 580 KNLYADIDAAWQALR 624
KNLYADI AA++ L+
Sbjct: 161 KNLYADITAAFELLK 175
>Z95559-9|CAI46625.1| 510|Caenorhabditis elegans Hypothetical
protein Y41E3.18 protein.
Length = 510
Score = 48.0 bits (109), Expect = 5e-06
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Frame = +1
Query: 358 IEGFYSRTTRGNKIACLFVRCSPN--ARFTILFSHGNAVDLGQMSSFYLGLGTRIN---- 519
+ GF +T NKI C++V C RFT+L+SH N DL S +G+ + I+
Sbjct: 241 VRGFVLKTKNKNKIGCVYVGCPDGFAPRFTLLYSHPNGSDL---SDHLIGIPSLIDIARF 297
Query: 520 --CNIFXXXXXXXXXXXXKPSEKNLYADIDAAWQ 615
C ++ SE NLY+DI A ++
Sbjct: 298 YRCEVYSYDYTGYGISGGIASESNLYSDIQAIYE 331
>Z81493-7|CAE46664.1| 342|Caenorhabditis elegans Hypothetical
protein F01D5.7b protein.
Length = 342
Score = 33.5 bits (73), Expect = 0.13
Identities = 35/149 (23%), Positives = 58/149 (38%), Gaps = 18/149 (12%)
Frame = +1
Query: 223 KIAAKLAFLPPEP--TYAFT----PDETGSKFSLTLTERAEWQYSEREKENIEGFYSRTT 384
+I KLAF PP+ TY P++ E + +R ++ F T+
Sbjct: 38 EIIRKLAFHPPDKGATYRIELKSDPEKDLESVRDCHDEPVQLVVRDRVHPEVKVFSVTTS 97
Query: 385 RGNKIACLFVRCSPN--------ARFTILFSHGNAVDLGQM----SSFYLGLGTRINCNI 528
+ + C V+CSPN A +LF ++ DLG S + ++
Sbjct: 98 EDSHLVC--VKCSPNCYSKNPEVANQVVLFCQSSSADLGSFLQPNSMNFSTFANLFETDV 155
Query: 529 FXXXXXXXXXXXXKPSEKNLYADIDAAWQ 615
+ SEKN+YAD+ A ++
Sbjct: 156 YAFDYSGYGFSSGTQSEKNMYADVRAVYE 184
>Z81493-6|CAB04038.1| 335|Caenorhabditis elegans Hypothetical
protein F01D5.7a protein.
Length = 335
Score = 33.5 bits (73), Expect = 0.13
Identities = 35/149 (23%), Positives = 58/149 (38%), Gaps = 18/149 (12%)
Frame = +1
Query: 223 KIAAKLAFLPPEP--TYAFT----PDETGSKFSLTLTERAEWQYSEREKENIEGFYSRTT 384
+I KLAF PP+ TY P++ E + +R ++ F T+
Sbjct: 38 EIIRKLAFHPPDKGATYRIELKSDPEKDLESVRDCHDEPVQLVVRDRVHPEVKVFSVTTS 97
Query: 385 RGNKIACLFVRCSPN--------ARFTILFSHGNAVDLGQM----SSFYLGLGTRINCNI 528
+ + C V+CSPN A +LF ++ DLG S + ++
Sbjct: 98 EDSHLVC--VKCSPNCYSKNPEVANQVVLFCQSSSADLGSFLQPNSMNFSTFANLFETDV 155
Query: 529 FXXXXXXXXXXXXKPSEKNLYADIDAAWQ 615
+ SEKN+YAD+ A ++
Sbjct: 156 YAFDYSGYGFSSGTQSEKNMYADVRAVYE 184
>Z47067-3|CAA87330.2| 446|Caenorhabditis elegans Hypothetical
protein C43C3.3 protein.
Length = 446
Score = 33.5 bits (73), Expect = 0.13
Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Frame = +1
Query: 289 GSKFSLTLTERAEWQYSERE---KENIEGFYSRTTRGNKIACLFVRCSPNARFTILFSHG 459
GS+ +TLT+ + +Y+E ++N + + +TTR N + CL+ R RF+ + S+G
Sbjct: 96 GSECDVTLTDLPKHRYAETTVVLEDNADLSFGKTTRLNHVFCLYTRNVKTIRFSDV-SNG 154
Query: 460 NAV 468
+ V
Sbjct: 155 HEV 157
>Z81493-8|CAB04043.1| 305|Caenorhabditis elegans Hypothetical
protein F01D5.8 protein.
Length = 305
Score = 31.1 bits (67), Expect = 0.67
Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 12/103 (11%)
Frame = +1
Query: 349 KENIEGFYSRTTRGNKIACLFVRCSPN--------ARFTILFSHGNAVDLG---QMSSF- 492
++++E F +T N + C V+C+P+ A +LF N+ DLG Q +S
Sbjct: 43 EQDVEVFSVKTANNNDLVC--VKCTPDSYSSNPAVAEQVVLFCQPNSSDLGGFLQPNSMN 100
Query: 493 YLGLGTRINCNIFXXXXXXXXXXXXKPSEKNLYADIDAAWQAL 621
++ +++ EKN+YAD+ A ++ +
Sbjct: 101 FVTYANVFETDLYAFDYSGYGFSSGTQGEKNVYADVRAVYEKI 143
>Z81061-3|CAB02933.1| 232|Caenorhabditis elegans Hypothetical
protein F14H8.4 protein.
Length = 232
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 177 FQRTLLPVLLSAMPRKNCGQVSISASRTNVCI 272
F RT PVL +A+P+ N + I+AS T+ I
Sbjct: 187 FHRTFCPVLTNAIPKPNAPPMRIAASPTSAQI 218
>Z70308-1|CAA94351.1| 213|Caenorhabditis elegans Hypothetical
protein F49E11.4 protein.
Length = 213
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -3
Query: 231 RNFSWAWRTTKQATKFAET*SVHFVSVLFVNTSIY 127
R SW+ + T ATKFAET + V+ SI+
Sbjct: 58 RKISWSKKLTNAATKFAETCPKNHSVVMNTGESIF 92
>U00052-2|AAK95881.1| 404|Caenorhabditis elegans Hypothetical
protein K02F3.6 protein.
Length = 404
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +1
Query: 319 RAEWQYSEREKENI-EGFYSRTTRGNKIACLFVRCSPNARFTILFSHG 459
R+ ++ +REK N+ EG+ SR + K+ +V+ + + +LF HG
Sbjct: 100 RSLFEKKQREKPNVLEGWDSRYIKLKKVRLHYVQTGSDDKPLMLFIHG 147
>AC006834-5|AAF40007.1| 451|Caenorhabditis elegans Hypothetical
protein ZK973.3 protein.
Length = 451
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 242 ANLAAIFPGHGGQQNRQQSSLKLNPFI 162
A L +F GHGGQQ + S L P++
Sbjct: 67 AFLFGVFDGHGGQQCSRHISTNLYPYL 93
>U55363-8|AAA97966.1| 829|Caenorhabditis elegans Germinal center
kinase family protein2 protein.
Length = 829
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 311 SQNALSGNTQNVKKKTSKASTPERRGAT 394
+Q A +GN++N TS ASTP G T
Sbjct: 426 AQKAAAGNSKNRFSSTSIASTPSEDGLT 453
>AF040655-7|AAB95044.2| 565|Caenorhabditis elegans Hypothetical
protein T24E12.9 protein.
Length = 565
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = -2
Query: 427 LDCNEQRDRLSCCPSSFWSRSLRCFLFHVLS 335
L+CN Q++ ++ PSS+ + + FL H L+
Sbjct: 36 LECNRQQNNITAKPSSYATANNNIFLEHQLA 66
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,393,018
Number of Sequences: 27780
Number of extensions: 261950
Number of successful extensions: 662
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 660
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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