Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt7b22
(552 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U37548-1|AAA79198.2| 488|Caenorhabditis elegans Sulfatase domai... 62 3e-10
U53180-8|AAA96290.1| 452|Caenorhabditis elegans Sulfatase domai... 52 3e-07
U37548-2|ABK57090.1| 452|Caenorhabditis elegans Sulfatase domai... 50 1e-06
U43375-1|AAA83618.1| 709|Caenorhabditis elegans Sulfatase domai... 37 0.011
AC006624-8|AAF39782.2| 1092|Caenorhabditis elegans Importin beta... 29 2.9
U53150-7|ABB51189.1| 1375|Caenorhabditis elegans Twik family of ... 27 9.0
U53150-6|ABB51187.1| 1544|Caenorhabditis elegans Twik family of ... 27 9.0
U53150-5|ABB51188.1| 1720|Caenorhabditis elegans Twik family of ... 27 9.0
AF022985-11|AAB69967.2| 650|Caenorhabditis elegans Hypothetical... 27 9.0
>U37548-1|AAA79198.2| 488|Caenorhabditis elegans Sulfatase domain
protein protein3, isoform a protein.
Length = 488
Score = 61.7 bits (143), Expect = 3e-10
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Frame = +1
Query: 301 VNASTQQKSPNIVLIIADDLGWDDVSFHGSDQILTPNIDLLAYSGKA--LGRYYTHCICT 474
V+ T + PN++ I+ADDLG+ DV + S + TPN+ LA+ L Y + +CT
Sbjct: 22 VDGQTATQKPNVLFIMADDLGFSDVDWKDST-LHTPNLRHLAFHKNTALLSNSYVNQLCT 80
Query: 475 PSRAALLTGKYAHRIGMQ 528
P+R+A +TG Y R+G Q
Sbjct: 81 PTRSAFMTGYYPFRVGTQ 98
>U53180-8|AAA96290.1| 452|Caenorhabditis elegans Sulfatase domain
protein protein 2 protein.
Length = 452
Score = 52.0 bits (119), Expect = 3e-07
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = +1
Query: 322 KSPNIVLIIADDLGWDDVSFHGSDQILTPNIDLLAYSGKALGRYYT-HCICTPSRAALLT 498
+ PNIV+++ DDLG+ D++ +G +D +A G + Y+ +C+PSRA +T
Sbjct: 31 RHPNIVILMIDDLGYGDIASYGHPTQEYTQVDRMAAEGTRFTQAYSADSMCSPSRAGFIT 90
Query: 499 GKYAHRIGMQG 531
G+ R+G+ G
Sbjct: 91 GRLPIRLGIVG 101
>U37548-2|ABK57090.1| 452|Caenorhabditis elegans Sulfatase domain
protein protein3, isoform b protein.
Length = 452
Score = 49.6 bits (113), Expect = 1e-06
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Frame = +1
Query: 346 IADDLGWDDVSFHGSDQILTPNIDLLAYSGKA--LGRYYTHCICTPSRAALLTGKYAHRI 519
+ADDLG+ DV + S + TPN+ LA+ L Y + +CTP+R+A +TG Y R+
Sbjct: 1 MADDLGFSDVDWKDST-LHTPNLRHLAFHKNTALLSNSYVNQLCTPTRSAFMTGYYPFRV 59
Query: 520 GMQ 528
G Q
Sbjct: 60 GTQ 62
>U43375-1|AAA83618.1| 709|Caenorhabditis elegans Sulfatase domain
protein protein 1 protein.
Length = 709
Score = 36.7 bits (81), Expect = 0.011
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Frame = +1
Query: 274 ILFLILNW-IVNASTQQKSPNIVLIIADDLGWDDVSFHGSDQILTPNIDLLAYSGKAL-G 447
+LFLI+ + + N++LI+ DD D+ GS + ++ G
Sbjct: 16 VLFLIIPIKVTSIHFVDSQHNVILILTDD---QDIEL-GSMDFMPKTSQIMKERGTEFTS 71
Query: 448 RYYTHCICTPSRAALLTGKYAH 513
Y T IC PSR+ +LTG Y H
Sbjct: 72 GYVTTPICCPSRSTILTGLYVH 93
>AC006624-8|AAF39782.2| 1092|Caenorhabditis elegans Importin beta
family protein 3 protein.
Length = 1092
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = +1
Query: 259 EMYNTILFLILNWIVNASTQQKSPNIVLIIADDLGWDDVSFHGSDQILTPNIDLL 423
E Y ++ + L+W+ S ++SP I +A+ D + G + P I L+
Sbjct: 980 EAYGKVVEMFLSWLPTYSDTEESPYIYTCLAELFDKQDAALFGPENQNLPRIFLV 1034
>U53150-7|ABB51189.1| 1375|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform c protein.
Length = 1375
Score = 27.1 bits (57), Expect = 9.0
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +1
Query: 400 LTPNIDLLAYSGKALGRYYTHCICTPSRAALLTGKYAHRIGMQGY 534
L +I A S K +YY ICTP + L T K IG+ +
Sbjct: 43 LVASIKESAISSKRKLKYYCSFICTPIKKLLSTFKLLIIIGLYSF 87
>U53150-6|ABB51187.1| 1544|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform a protein.
Length = 1544
Score = 27.1 bits (57), Expect = 9.0
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +1
Query: 400 LTPNIDLLAYSGKALGRYYTHCICTPSRAALLTGKYAHRIGMQGY 534
L +I A S K +YY ICTP + L T K IG+ +
Sbjct: 43 LVASIKESAISSKRKLKYYCSFICTPIKKLLSTFKLLIIIGLYSF 87
>U53150-5|ABB51188.1| 1720|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform b protein.
Length = 1720
Score = 27.1 bits (57), Expect = 9.0
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +1
Query: 400 LTPNIDLLAYSGKALGRYYTHCICTPSRAALLTGKYAHRIGMQGY 534
L +I A S K +YY ICTP + L T K IG+ +
Sbjct: 43 LVASIKESAISSKRKLKYYCSFICTPIKKLLSTFKLLIIIGLYSF 87
>AF022985-11|AAB69967.2| 650|Caenorhabditis elegans Hypothetical
protein T15B7.14 protein.
Length = 650
Score = 27.1 bits (57), Expect = 9.0
Identities = 7/23 (30%), Positives = 15/23 (65%)
Frame = +1
Query: 7 WLLLWSHVIYIYRATFYYFFLNI 75
W L+WS ++ ++ + + FLN+
Sbjct: 393 WALIWSFIVILFSSASHSLFLNV 415
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,566,963
Number of Sequences: 27780
Number of extensions: 248789
Number of successful extensions: 696
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 693
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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