Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt7b16
(591 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132859-6|CAB60493.3| 324|Caenorhabditis elegans Hypothetical ... 30 1.1
Z68302-1|CAA92634.2| 382|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z68114-10|CAA92157.2| 322|Caenorhabditis elegans Hypothetical p... 28 4.3
AY652946-1|AAT73713.1| 708|Caenorhabditis elegans guanylate cyc... 28 4.3
AF038609-4|AAU87824.1| 708|Caenorhabditis elegans Guanylyl cycl... 28 4.3
U88170-8|AAB42244.1| 345|Caenorhabditis elegans Serpentine rece... 28 5.7
Z92967-2|CAB07478.1| 1101|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z82052-10|CAB04830.1| 1101|Caenorhabditis elegans Hypothetical p... 27 10.0
AL021572-4|CAA16519.1| 1101|Caenorhabditis elegans Hypothetical ... 27 10.0
AL021507-1|CAA16430.1| 1101|Caenorhabditis elegans Hypothetical ... 27 10.0
>AL132859-6|CAB60493.3| 324|Caenorhabditis elegans Hypothetical
protein Y39C12A.7 protein.
Length = 324
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +3
Query: 141 FAKMRKQIHTIVLPTVVVIFLLICVYVYIKTRPSTMHD 254
F K I + T+ IF+L+C Y++ K + H+
Sbjct: 224 FTASEKNIFLLSFDTIYTIFILVCPYLHYKNNTTWQHE 261
>Z68302-1|CAA92634.2| 382|Caenorhabditis elegans Hypothetical
protein ZK792.3 protein.
Length = 382
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +3
Query: 105 ETARQKRERKQEFAK-MRKQIHTIVLPTVVVIFLLICVYVYIKTRPSTMHDA*Q*LYYVN 281
ET ++ + +E A+ MR +I T+ P++ + VY +K + A + +
Sbjct: 147 ETTEKRSSKVKEMARFMRSKITTVHTPSIFSCIRMYSVYSIVKMLYLIIAIAQFVILAIF 206
Query: 282 RIYILDLFWGW 314
D+FWGW
Sbjct: 207 LDQEKDMFWGW 217
>Z68114-10|CAA92157.2| 322|Caenorhabditis elegans Hypothetical
protein F17A2.13 protein.
Length = 322
Score = 28.3 bits (60), Expect = 4.3
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -2
Query: 368 STKSLTCYHIESQSQLEKPPPE*VKNVYSIYIIKLLLCVVHRR 240
S++S C S S+ EKP PE V +Y KL VH +
Sbjct: 185 SSESSHCSASSSLSKTEKPEPENSNFVNELYYCKLARSQVHHK 227
>AY652946-1|AAT73713.1| 708|Caenorhabditis elegans guanylate
cyclase-like protein protein.
Length = 708
Score = 28.3 bits (60), Expect = 4.3
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +3
Query: 15 FKNCKTYIHILFIFADLLALKMRKLKGPVKETARQKRERKQEFAKMR--KQIHTIVLPTV 188
+KN +Y++ LFIF K +++ E +Q K E + I I P V
Sbjct: 281 YKNVLSYLNTLFIFQLKHHSKRNEVQEGSSEAFQQPLVLKGEMMPINDGNSIIFICSPHV 340
Query: 189 VVIFLLICVYVYIKTRPSTMHDA*Q*LYYVNRIYILDL 302
+ ++ + +YI P MHDA + L +N+ I +
Sbjct: 341 TTVRDILNLKLYISDMP--MHDATRDLVMLNQSRICQM 376
>AF038609-4|AAU87824.1| 708|Caenorhabditis elegans Guanylyl cyclase
protein 37 protein.
Length = 708
Score = 28.3 bits (60), Expect = 4.3
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +3
Query: 15 FKNCKTYIHILFIFADLLALKMRKLKGPVKETARQKRERKQEFAKMR--KQIHTIVLPTV 188
+KN +Y++ LFIF K +++ E +Q K E + I I P V
Sbjct: 281 YKNVLSYLNTLFIFQLKHHSKRNEVQEGSSEAFQQPLVLKGEMMPINDGNSIIFICSPHV 340
Query: 189 VVIFLLICVYVYIKTRPSTMHDA*Q*LYYVNRIYILDL 302
+ ++ + +YI P MHDA + L +N+ I +
Sbjct: 341 TTVRDILNLKLYISDMP--MHDATRDLVMLNQSRICQM 376
>U88170-8|AAB42244.1| 345|Caenorhabditis elegans Serpentine
receptor, class h protein49 protein.
Length = 345
Score = 27.9 bits (59), Expect = 5.7
Identities = 19/76 (25%), Positives = 37/76 (48%)
Frame = +3
Query: 24 CKTYIHILFIFADLLALKMRKLKGPVKETARQKRERKQEFAKMRKQIHTIVLPTVVVIFL 203
C I ++F + L + +RK++ + R K+ +K F Q+ + +L VV +FL
Sbjct: 221 CLIPIQVIFFISHSL-MYLRKIQNINTFSKRTKKLQKSFFRAGIAQVTSPILVIVVPLFL 279
Query: 204 LICVYVYIKTRPSTMH 251
L + + + P M+
Sbjct: 280 LTYILITKQYLPGAMN 295
>Z92967-2|CAB07478.1| 1101|Caenorhabditis elegans Hypothetical protein
T25E12.4a protein.
Length = 1101
Score = 27.1 bits (57), Expect = 10.0
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -1
Query: 183 LVTQSYEFVFAFSRILVFFP 124
LVT ++F F FS ++FFP
Sbjct: 1068 LVTYPFKFYFVFSCFIIFFP 1087
>Z82052-10|CAB04830.1| 1101|Caenorhabditis elegans Hypothetical
protein T25E12.4a protein.
Length = 1101
Score = 27.1 bits (57), Expect = 10.0
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -1
Query: 183 LVTQSYEFVFAFSRILVFFP 124
LVT ++F F FS ++FFP
Sbjct: 1068 LVTYPFKFYFVFSCFIIFFP 1087
>AL021572-4|CAA16519.1| 1101|Caenorhabditis elegans Hypothetical
protein T25E12.4a protein.
Length = 1101
Score = 27.1 bits (57), Expect = 10.0
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -1
Query: 183 LVTQSYEFVFAFSRILVFFP 124
LVT ++F F FS ++FFP
Sbjct: 1068 LVTYPFKFYFVFSCFIIFFP 1087
>AL021507-1|CAA16430.1| 1101|Caenorhabditis elegans Hypothetical
protein T25E12.4a protein.
Length = 1101
Score = 27.1 bits (57), Expect = 10.0
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -1
Query: 183 LVTQSYEFVFAFSRILVFFP 124
LVT ++F F FS ++FFP
Sbjct: 1068 LVTYPFKFYFVFSCFIIFFP 1087
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,952,130
Number of Sequences: 27780
Number of extensions: 224777
Number of successful extensions: 664
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 663
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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