Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt7b08
         (673 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_1014 - 29687343-29687410,29688054-29688191,29689246-296892...    28   7.8  

>03_05_1014 - 29687343-29687410,29688054-29688191,29689246-29689294,
            29689623-29689728,29690184-29690332,29690840-29690921,
            29691308-29691360,29691644-29691729,29691855-29691909,
            29692179-29692579,29693564-29693660,29694191-29694322,
            29694426-29694476,29694659-29694751,29694917-29694992,
            29695711-29695856,29696009-29696043,29696056-29696107,
            29696290-29696401,29696617-29696813,29697456-29697560,
            29697667-29697819,29698317-29698424,29698608-29698752,
            29699374-29699432,29701397-29701441,29701677-29701730,
            29701901-29702113,29702873-29702958,29704492-29704572,
            29704670-29704729,29705599-29705644,29706212-29706286,
            29706376-29706512,29708306-29708366,29708726-29708743,
            29709710-29709743,29709811-29709902,29709997-29710029
          Length = 1260

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 14/73 (19%), Positives = 33/73 (45%)
 Frame = +2

Query: 98   LILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTPAPLKIGHPKLRQIDV 277
            ++L       +L + P      +IL +  ++    ++ D+     +  K+G  + +Q  +
Sbjct: 1155 IVLTMLLHISVLYIEPLSALFSVILIDEVLKFFSRSSRDLNARKASKYKMGQKRSKQDGI 1214

Query: 278  SSTEKGFDFDGLF 316
             S  KG+++  LF
Sbjct: 1215 LSNRKGYEYSKLF 1227


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,626,796
Number of Sequences: 37544
Number of extensions: 338859
Number of successful extensions: 712
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 712
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1703141568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)