Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt7b08
(673 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024759-6|AAP13761.1| 527|Caenorhabditis elegans Hypothetical ... 40 0.001
Z78415-3|CAB01674.1| 530|Caenorhabditis elegans Hypothetical pr... 35 0.061
AF026215-2|AAB71324.2| 533|Caenorhabditis elegans Udp-glucurono... 33 0.14
Z75529-1|CAA99782.1| 534|Caenorhabditis elegans Hypothetical pr... 33 0.24
U88311-5|AAB42343.1| 531|Caenorhabditis elegans Udp-glucuronosy... 32 0.32
Z50006-2|CAD44148.1| 523|Caenorhabditis elegans Hypothetical pr... 31 0.56
Z50006-1|CAA90301.1| 190|Caenorhabditis elegans Hypothetical pr... 31 0.56
U40959-5|AAA81769.1| 531|Caenorhabditis elegans Udp-glucuronosy... 31 0.56
Z75554-10|CAA99956.1| 535|Caenorhabditis elegans Hypothetical p... 31 0.75
Z72502-15|CAN86590.1| 540|Caenorhabditis elegans Hypothetical p... 31 0.75
Z72502-14|CAA96584.2| 536|Caenorhabditis elegans Hypothetical p... 31 0.75
AF022972-7|AAM29671.1| 124|Caenorhabditis elegans Hypothetical ... 31 0.75
Z71177-8|CAA94866.2| 525|Caenorhabditis elegans Hypothetical pr... 31 0.99
U39851-2|AAF99874.1| 540|Caenorhabditis elegans Hypothetical pr... 31 0.99
U88311-2|AAB42350.2| 529|Caenorhabditis elegans Udp-glucuronosy... 30 1.3
AC024799-5|AAO25979.1| 474|Caenorhabditis elegans Hypothetical ... 30 1.7
AC024799-4|AAK72318.1| 536|Caenorhabditis elegans Hypothetical ... 30 1.7
Z75554-3|CAA99955.2| 533|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z70782-8|CAA94845.2| 536|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z68493-4|CAA92791.1| 520|Caenorhabditis elegans Hypothetical pr... 29 2.3
AF100663-3|AAC68980.1| 529|Caenorhabditis elegans Udp-glucurono... 29 2.3
AL033514-38|CAA22111.2| 341|Caenorhabditis elegans Hypothetical... 29 3.0
U55369-2|AAK52183.2| 526|Caenorhabditis elegans Udp-glucuronosy... 29 4.0
AF022972-4|AAC48236.2| 528|Caenorhabditis elegans Udp-glucurono... 29 4.0
U23518-8|AAO38654.1| 400|Caenorhabditis elegans Nuclear hormone... 28 5.3
U23518-7|AAO38655.1| 440|Caenorhabditis elegans Nuclear hormone... 28 5.3
U23518-6|AAD31548.2| 446|Caenorhabditis elegans Nuclear hormone... 28 5.3
U23518-5|AAO38653.1| 448|Caenorhabditis elegans Nuclear hormone... 28 5.3
U23518-4|ABB88231.1| 450|Caenorhabditis elegans Nuclear hormone... 28 5.3
AF083234-1|AAD03692.1| 400|Caenorhabditis elegans nuclear recep... 28 5.3
AF083233-1|AAD03691.1| 458|Caenorhabditis elegans nuclear recep... 28 5.3
U97003-1|AAB52270.2| 527|Caenorhabditis elegans Udp-glucuronosy... 28 6.9
AF100663-2|AAC68981.2| 532|Caenorhabditis elegans Udp-glucurono... 27 9.2
>AC024759-6|AAP13761.1| 527|Caenorhabditis elegans Hypothetical
protein Y37E11AR.5 protein.
Length = 527
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = +2
Query: 89 ILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTPAPLKI 247
+L +L S YK+L P G SHM +L+EA HDVT+L P + I
Sbjct: 7 LLLFVLPAASCYKILVSVPKFGFSHMQTMGKLADILVEAGHDVTFLMPVDVPI 59
>Z78415-3|CAB01674.1| 530|Caenorhabditis elegans Hypothetical
protein C17G1.3a protein.
Length = 530
Score = 34.7 bits (76), Expect = 0.061
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +2
Query: 74 MLRAIILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTP 232
+L A++L ++ S YK+L G SH+ V L++A HDVT + P
Sbjct: 3 LLSALLLQILFNVSSPYKILVYSNLFGHSHIKFVGSVVDTLVDAGHDVTVVLP 55
>AF026215-2|AAB71324.2| 533|Caenorhabditis elegans
Udp-glucuronosyltransferase protein36 protein.
Length = 533
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +2
Query: 86 IILCLILVTCS-AYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTP 232
++ CL CS +Y L P G SH L A H+VT+ TP
Sbjct: 10 LLFCLFFALCSDSYNFLVFCPLFGHSHTTFFAKIADTLTYAGHNVTFFTP 59
>Z75529-1|CAA99782.1| 534|Caenorhabditis elegans Hypothetical
protein C44H9.1 protein.
Length = 534
Score = 32.7 bits (71), Expect = 0.24
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Frame = +2
Query: 86 IILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTPAPLK-----IG 250
+ L L+ + CS YK+L P G SH +L++A HDVT L P ++ +G
Sbjct: 7 LTLLLLELVCS-YKVLVFNPAFGASHSNFLGKISDILIDAGHDVTMLIPVCMESKKDLVG 65
Query: 251 HPKLRQI 271
K+++I
Sbjct: 66 SKKVKKI 72
>U88311-5|AAB42343.1| 531|Caenorhabditis elegans
Udp-glucuronosyltransferase protein25 protein.
Length = 531
Score = 32.3 bits (70), Expect = 0.32
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +2
Query: 71 IMLRAIILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTP 232
++++++ + L ++ +A+ +L P G SH L EA H+VT++ P
Sbjct: 1 MIIQSVFILLSVINVNAFNILVYSPSFGGSHTNFMARLADTLTEAGHNVTFVVP 54
>Z50006-2|CAD44148.1| 523|Caenorhabditis elegans Hypothetical
protein T07C5.1c protein.
Length = 523
Score = 31.5 bits (68), Expect = 0.56
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +2
Query: 116 SAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTPAPLKI 247
+A K+L P KSH++L Y LL A HD P+ K+
Sbjct: 24 NAAKILVYCPSISKSHVLLCSKYADLLHNAGHDTVLFIPSYSKL 67
>Z50006-1|CAA90301.1| 190|Caenorhabditis elegans Hypothetical
protein T07C5.1b protein.
Length = 190
Score = 31.5 bits (68), Expect = 0.56
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +2
Query: 116 SAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTPAPLKI 247
+A K+L P KSH++L Y LL A HD P+ K+
Sbjct: 24 NAAKILVYCPSISKSHVLLCSKYADLLHNAGHDTVLFIPSYSKL 67
>U40959-5|AAA81769.1| 531|Caenorhabditis elegans
Udp-glucuronosyltransferase protein46 protein.
Length = 531
Score = 31.5 bits (68), Expect = 0.56
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +2
Query: 86 IILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYL 226
++L + +YK+L P KSH+I L A HDVT L
Sbjct: 6 VLLATFVNAAFSYKILVFSPATSKSHLISNGRLADELARAGHDVTVL 52
>Z75554-10|CAA99956.1| 535|Caenorhabditis elegans Hypothetical
protein ZC455.5a protein.
Length = 535
Score = 31.1 bits (67), Expect = 0.75
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 86 IILCLILVT-CSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTP 232
++L +LV+ +YK L + P G SHM L + H VTY P
Sbjct: 7 VLLFSVLVSHVESYKFLVISPVYGYSHMKFMAIIANQLADEGHQVTYFQP 56
>Z72502-15|CAN86590.1| 540|Caenorhabditis elegans Hypothetical
protein C08B6.1b protein.
Length = 540
Score = 31.1 bits (67), Expect = 0.75
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +2
Query: 89 ILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTPAPLK 244
IL I+ ++YK+L P G SH +L++A HDVT L P ++
Sbjct: 10 ILFSIIDYSNSYKVLVFNPAFGASHSNFLGKISDILIDAGHDVTMLIPIAMQ 61
>Z72502-14|CAA96584.2| 536|Caenorhabditis elegans Hypothetical
protein C08B6.1a protein.
Length = 536
Score = 31.1 bits (67), Expect = 0.75
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +2
Query: 89 ILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTPAPLK 244
IL I+ ++YK+L P G SH +L++A HDVT L P ++
Sbjct: 10 ILFSIIDYSNSYKVLVFNPAFGASHSNFLGKISDILIDAGHDVTMLIPIAMQ 61
>AF022972-7|AAM29671.1| 124|Caenorhabditis elegans Hypothetical
protein F10D2.8 protein.
Length = 124
Score = 31.1 bits (67), Expect = 0.75
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = +2
Query: 86 IILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTP 232
+IL LI T S Y L P G SH L +A H+VT+ TP
Sbjct: 6 VILSLIYSTYS-YNFLVFCPLFGHSHTKFFATIADALTDAGHNVTFFTP 53
>Z71177-8|CAA94866.2| 525|Caenorhabditis elegans Hypothetical
protein AC3.2 protein.
Length = 525
Score = 30.7 bits (66), Expect = 0.99
Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
Frame = +2
Query: 74 MLRAIILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDV----TYLTPAPL 241
M + L L L+ A K+L P +SH+I L++A HDV T P
Sbjct: 1 MYTFLFLLLSLLAVDAGKILVYSPSISRSHLISNGRIADALVDAGHDVVMFITEYEPLTE 60
Query: 242 KIGHPKLRQIDVS--STEKGFDFDGL 313
G K + I + ST+ D DG+
Sbjct: 61 FTGTKKAKVITMKGFSTKFAEDMDGI 86
>U39851-2|AAF99874.1| 540|Caenorhabditis elegans Hypothetical
protein C23G10.6 protein.
Length = 540
Score = 30.7 bits (66), Expect = 0.99
Identities = 21/56 (37%), Positives = 27/56 (48%)
Frame = +2
Query: 65 KSIMLRAIILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTP 232
K I L + L LI T + +L + P G SHM L EA H+VT+L P
Sbjct: 40 KMIRLHLLFLFLINQTLTI-NVLVLSPAFGGSHMNFMAHLADTLTEAGHNVTFLIP 94
>U88311-2|AAB42350.2| 529|Caenorhabditis elegans
Udp-glucuronosyltransferase protein26 protein.
Length = 529
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = +2
Query: 68 SIMLRAIILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTPAPLKI 247
S++ +++LC + + S+ +L P SH L EA H+VT+L P L+
Sbjct: 5 SVVSISLVLCTLSLV-SSLNILVHSPAYAASHTNFMARLADTLTEAGHNVTFLVPIALEE 63
Query: 248 GHPKL 262
KL
Sbjct: 64 RRDKL 68
>AC024799-5|AAO25979.1| 474|Caenorhabditis elegans Hypothetical
protein Y49C4A.8b protein.
Length = 474
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +2
Query: 71 IMLRAIILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTP 232
++L ++I L+ + S+ +L P SH L E H+VTYL P
Sbjct: 1 MLLNSLIFTLLFCSSSSLNILVYSPAYAASHSNFLGKLADTLTERGHNVTYLMP 54
>AC024799-4|AAK72318.1| 536|Caenorhabditis elegans Hypothetical
protein Y49C4A.8a protein.
Length = 536
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +2
Query: 71 IMLRAIILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTP 232
++L ++I L+ + S+ +L P SH L E H+VTYL P
Sbjct: 1 MLLNSLIFTLLFCSSSSLNILVYSPAYAASHSNFLGKLADTLTERGHNVTYLMP 54
>Z75554-3|CAA99955.2| 533|Caenorhabditis elegans Hypothetical
protein ZC455.4 protein.
Length = 533
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +2
Query: 119 AYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTP 232
+YK L + P G SHM L A +DVTY P
Sbjct: 19 SYKFLVISPVYGFSHMKYMAELANHLARAGNDVTYFQP 56
>Z70782-8|CAA94845.2| 536|Caenorhabditis elegans Hypothetical
protein R04B5.9 protein.
Length = 536
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 119 AYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYL 226
AYK+L P KSH+I L +A H+VT L
Sbjct: 21 AYKILVFSPATSKSHLISNGRIADELAKAGHNVTLL 56
>Z68493-4|CAA92791.1| 520|Caenorhabditis elegans Hypothetical
protein C33A12.6 protein.
Length = 520
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +2
Query: 74 MLRAIILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTP 232
+L IL I+ S+YK+L G SH+ + +L +A ++VT L P
Sbjct: 4 LLNIFILTSIISCVSSYKILLYSNLFGHSHVKVLAAAADILTDAGNNVTVLMP 56
>AF100663-3|AAC68980.1| 529|Caenorhabditis elegans
Udp-glucuronosyltransferase protein20 protein.
Length = 529
Score = 29.5 bits (63), Expect = 2.3
Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 2/112 (1%)
Frame = +2
Query: 116 SAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTPAPLKIGHPKLRQI-DVSSTEK 292
S+YK+L G SH+ L +A H+VT L P K L+ +V +
Sbjct: 15 SSYKILFYTNLFGHSHVKFLGAAADTLTDAGHNVTVLIPVFDKALKTSLKSTKNVIMLQP 74
Query: 293 GFDFDGLFNFKKLINKEVDLSD-TNHKYIVMQYVTESLLMHPNVQKLLLDTD 445
D + + K + L D TN ++ + T S + +++L +TD
Sbjct: 75 TEDIANFVKGRATMLKNIWLQDNTNPLTMIKKVETMSKIFSSQCKRVLSETD 126
>AL033514-38|CAA22111.2| 341|Caenorhabditis elegans Hypothetical
protein Y75B8A.33 protein.
Length = 341
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +2
Query: 305 DGLFNFKKLINKEVDLSDTNHKYIVMQYVTESLLMHPNVQKLLLDTDQTFDAVI 466
D LF I + D++D YIV+ + SL+ NV + +L TDQ + +
Sbjct: 95 DILFVVSTFIGVDADINDRYSWYIVIYTLVGSLVYGWNVLRFVLWTDQKLEGFL 148
>U55369-2|AAK52183.2| 526|Caenorhabditis elegans
Udp-glucuronosyltransferase protein48 protein.
Length = 526
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +2
Query: 71 IMLRAIILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTP 232
++LR + + +++K+L P KSHMI L A H+V P
Sbjct: 1 MLLRILTFLAVCQVTTSHKILMFSPTASKSHMISQGRIADELANAGHEVVNFEP 54
>AF022972-4|AAC48236.2| 528|Caenorhabditis elegans
Udp-glucuronosyltransferase protein37 protein.
Length = 528
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 119 AYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTPAPLK 244
+Y L P G SH L EA H+VT+ TP ++
Sbjct: 16 SYNFLIFSPLFGHSHTTFFAKIADTLSEAGHNVTFFTPTIIR 57
>U23518-8|AAO38654.1| 400|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 21, isoform b protein.
Length = 400
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 302 FDGLFNFKKLINKEVDLSDTNHKYIVMQYVTESLLMH 412
F + N K L + ++LSD H V Q +TE+ +H
Sbjct: 360 FSSITNLKYLTSDNIELSDVLHVMEVDQLITEAFDVH 396
>U23518-7|AAO38655.1| 440|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 21, isoform c protein.
Length = 440
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 302 FDGLFNFKKLINKEVDLSDTNHKYIVMQYVTESLLMH 412
F + N K L + ++LSD H V Q +TE+ +H
Sbjct: 400 FSSITNLKYLTSDNIELSDVLHVMEVDQLITEAFDVH 436
>U23518-6|AAD31548.2| 446|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 21, isoform d protein.
Length = 446
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 302 FDGLFNFKKLINKEVDLSDTNHKYIVMQYVTESLLMH 412
F + N K L + ++LSD H V Q +TE+ +H
Sbjct: 406 FSSITNLKYLTSDNIELSDVLHVMEVDQLITEAFDVH 442
>U23518-5|AAO38653.1| 448|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 21, isoform a protein.
Length = 448
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 302 FDGLFNFKKLINKEVDLSDTNHKYIVMQYVTESLLMH 412
F + N K L + ++LSD H V Q +TE+ +H
Sbjct: 408 FSSITNLKYLTSDNIELSDVLHVMEVDQLITEAFDVH 444
>U23518-4|ABB88231.1| 450|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 21, isoform e protein.
Length = 450
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 302 FDGLFNFKKLINKEVDLSDTNHKYIVMQYVTESLLMH 412
F + N K L + ++LSD H V Q +TE+ +H
Sbjct: 410 FSSITNLKYLTSDNIELSDVLHVMEVDQLITEAFDVH 446
>AF083234-1|AAD03692.1| 400|Caenorhabditis elegans nuclear receptor
NHR-21b protein.
Length = 400
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 302 FDGLFNFKKLINKEVDLSDTNHKYIVMQYVTESLLMH 412
F + N K L + ++LSD H V Q +TE+ +H
Sbjct: 360 FSSITNLKYLTSDNIELSDVLHVMEVDQLITEAFDVH 396
>AF083233-1|AAD03691.1| 458|Caenorhabditis elegans nuclear receptor
NHR-21a protein.
Length = 458
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 302 FDGLFNFKKLINKEVDLSDTNHKYIVMQYVTESLLMH 412
F + N K L + ++LSD H V Q +TE+ +H
Sbjct: 418 FSSITNLKYLTSDNIELSDVLHVMEVDQLITEAFDVH 454
>U97003-1|AAB52270.2| 527|Caenorhabditis elegans
Udp-glucuronosyltransferase protein32 protein.
Length = 527
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/55 (25%), Positives = 25/55 (45%)
Frame = +2
Query: 68 SIMLRAIILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTP 232
+++ + +IL + + ++L P SH L EA H+VT+ TP
Sbjct: 2 ALLFKLMILYSVFSNTDSLRVLVYSPAYAASHTNFMARLADTLTEAGHNVTFFTP 56
>AF100663-2|AAC68981.2| 532|Caenorhabditis elegans
Udp-glucuronosyltransferase protein19 protein.
Length = 532
Score = 27.5 bits (58), Expect = 9.2
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +2
Query: 77 LRAIILCLILVTC--SAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTP 232
L +IIL C S+YK+L G SH+ +L +A H+VT + P
Sbjct: 3 LFSIILIFAATICFASSYKILFYTNLFGHSHVKFLGAAADILTDAGHNVTVVMP 56
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,622,600
Number of Sequences: 27780
Number of extensions: 307052
Number of successful extensions: 744
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 743
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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