Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt7b01
         (502 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6BYX8 Cluster: Putative inner membrane protein; n=1; P...    35   0.90 
UniRef50_A0Z076 Cluster: Putative uncharacterized protein; n=1; ...    34   2.1  
UniRef50_Q8IRB3 Cluster: CG32241-PA; n=1; Drosophila melanogaste...    33   3.6  
UniRef50_Q2H6R4 Cluster: Predicted protein; n=1; Chaetomium glob...    32   8.3  
UniRef50_Q18211 Cluster: Regulator of chromosome condensation; n...    32   8.3  

>UniRef50_A6BYX8 Cluster: Putative inner membrane protein; n=1;
            Planctomyces maris DSM 8797|Rep: Putative inner membrane
            protein - Planctomyces maris DSM 8797
          Length = 5594

 Score = 35.1 bits (77), Expect = 0.90
 Identities = 17/56 (30%), Positives = 31/56 (55%)
 Frame = -2

Query: 333  DNNGVGLDFSGSIRNTSGNVDVHDELHKRRGTGGNSRSNDNRSGLHGSSHYTTVSD 166
            D    G + S  +  +SGN  VHDE   +  + G+ +S D+R+ ++GS   T +++
Sbjct: 4038 DRYSAGAETSNEL-TSSGNSHVHDEYRTQNVSSGSHQSVDSRTPVNGSKSVTVIAN 4092


>UniRef50_A0Z076 Cluster: Putative uncharacterized protein; n=1;
           Lyngbya sp. PCC 8106|Rep: Putative uncharacterized
           protein - Lyngbya sp. PCC 8106
          Length = 981

 Score = 33.9 bits (74), Expect = 2.1
 Identities = 17/55 (30%), Positives = 32/55 (58%)
 Frame = -2

Query: 345 SLFGDNNGVGLDFSGSIRNTSGNVDVHDELHKRRGTGGNSRSNDNRSGLHGSSHY 181
           S  G N+G G  F  +  N+ GN+D   E ++  GTG ++  +DN++  +G++ +
Sbjct: 289 SFGGGNSGGGGGFGSNTPNSGGNIDT-GENNENLGTGNSAFGSDNQTEGNGNNAF 342


>UniRef50_Q8IRB3 Cluster: CG32241-PA; n=1; Drosophila
           melanogaster|Rep: CG32241-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 440

 Score = 33.1 bits (72), Expect = 3.6
 Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
 Frame = +1

Query: 31  KMKFLVAFALIAVASARVFEPISVGPALVDT---YEPIDTEPAYVDIP 165
           K KFL+AFAL+AVASA V    S    L +    Y P  + P  +D+P
Sbjct: 25  KQKFLIAFALVAVASADVSHLFSNSNNLQEDGYHYAP-PSAPVVIDVP 71


>UniRef50_Q2H6R4 Cluster: Predicted protein; n=1; Chaetomium
           globosum|Rep: Predicted protein - Chaetomium globosum
           (Soil fungus)
          Length = 490

 Score = 31.9 bits (69), Expect = 8.3
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = -2

Query: 291 NTSGNVDVHDELHKRRGTGGNSRSNDNRSGLHGSSHYTTVSDR 163
           N + N   H   H+RR + G    +D R  +HGS+ ++ +  R
Sbjct: 381 NNNNNNHTHTHTHQRRQSEGLGTRHDARGYMHGSTEHSAIPPR 423


>UniRef50_Q18211 Cluster: Regulator of chromosome condensation; n=2;
           Caenorhabditis|Rep: Regulator of chromosome condensation
           - Caenorhabditis elegans
          Length = 569

 Score = 31.9 bits (69), Expect = 8.3
 Identities = 12/18 (66%), Positives = 16/18 (88%)
 Frame = -2

Query: 303 GSIRNTSGNVDVHDELHK 250
           G++RN++GNVDVH  LHK
Sbjct: 269 GNLRNSNGNVDVHPLLHK 286


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 258,585,762
Number of Sequences: 1657284
Number of extensions: 3294117
Number of successful extensions: 15226
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15021
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29691847201
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)