Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt7a21
(646 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_1247 - 27322920-27323175,27323252-27323490,27324309-27324776 45 5e-05
05_04_0338 - 20392482-20392832,20393236-20393305,20393571-203937... 45 6e-05
01_06_1821 + 40126389-40126508,40126589-40126646,40126782-401268... 44 1e-04
02_04_0371 + 22434710-22435102,22435428-22435624,22435707-224358... 39 0.003
09_05_0003 + 20016534-20016703,20017679-20017915,20018585-200186... 36 0.021
05_03_0253 - 11014334-11014592,11015061-11015296,11015370-11015870 36 0.021
03_04_0189 - 18256878-18257322,18260724-18260849,18261321-18261691 36 0.036
03_06_0541 - 34607071-34607353,34608167-34608399,34609093-346092... 34 0.11
05_06_0254 - 26706830-26706943,26707063-26707193,26707330-267074... 33 0.15
01_05_0568 + 23339476-23339598,23339686-23339927,23340765-23341308 32 0.45
08_02_1165 + 24830547-24831154,24832048-24832159,24832250-248324... 30 1.4
01_01_1078 + 8489872-8490168,8490280-8490462,8490667-8490908,849... 30 1.8
04_03_0937 + 20923705-20923833,20924001-20924012,20924413-209244... 29 3.2
06_03_0774 + 24504964-24507459 29 4.2
04_04_1378 + 33105564-33105634,33105786-33106253,33106558-331065... 28 5.5
03_02_0068 + 5390004-5390425,5390517-5390949 28 5.5
01_07_0298 - 42586007-42589742,42590167-42590280,42590295-425904... 28 7.3
05_06_0183 - 26182481-26182897,26183005-26183163,26183261-261837... 27 9.7
04_04_1587 + 34630678-34632282 27 9.7
04_04_0005 + 22095107-22095210,22095347-22095431,22095553-220956... 27 9.7
01_06_0318 - 28434817-28435197,28435333-28435461 27 9.7
>12_02_1247 - 27322920-27323175,27323252-27323490,27324309-27324776
Length = 320
Score = 45.2 bits (102), Expect = 5e-05
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 1/105 (0%)
Frame = +2
Query: 299 GNPSNPPVLLCHGKLDASSGFR-PLVSLLPDSFYYVAIDLPGNGRSDHLPPGVRYTVIDL 475
G PPVLL HG + +R + +L F +A DL G G S YTV +
Sbjct: 24 GPADGPPVLLIHGFPELWLSWRHQMAALAARGFRALAPDLRGYGDSTVPDDPAAYTVFHI 83
Query: 476 VPAVIKVREHFKWDKFIYIGHSLGVPIGKFFNIAHPGYVTRMVEV 610
V ++ + +H K + +GH LG + + P + +V +
Sbjct: 84 VGDLVALLDHLALPKVMVVGHDLGAQVAWHLCLFRPDMLLAVVNL 128
>05_04_0338 -
20392482-20392832,20393236-20393305,20393571-20393790,
20394249-20394342,20394754-20394865,20395081-20395487
Length = 417
Score = 44.8 bits (101), Expect = 6e-05
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Frame = +2
Query: 257 CVKAPWGNIRGLTWGNPSNPPVLLCHGKLDASSG-FRPLVSLLPDSFYYVAIDLPGNGRS 433
C W +R PP+LL HG AS G +R + +L +S+ AIDL G G S
Sbjct: 100 CATWTWRGMRMNYLVRGEGPPLLLVHG-FGASVGHWRRNIGVLSESYTVYAIDLLGFGAS 158
Query: 434 DHLPPGVRYTVIDLVPAVIKVREHFKWDKFIYIGHSLG 547
D PPG YT+ ++ + + +G+S+G
Sbjct: 159 DK-PPGFSYTMETWAELILDFLDEVVRRPTVLVGNSVG 195
>01_06_1821 +
40126389-40126508,40126589-40126646,40126782-40126837,
40127076-40127176,40127336-40127405,40127501-40127570,
40127970-40128026,40128110-40128177,40128258-40128338,
40128474-40128551,40128644-40128799,40128874-40128933,
40129253-40129317,40130002-40130059
Length = 365
Score = 44.0 bits (99), Expect = 1e-04
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 4/120 (3%)
Frame = +2
Query: 299 GNPSNPPVLLCHGKLDASSGFRPLVSLLPDSFYYVAIDLPGNGRSDHLPP--GVRYTVID 472
G+ SNPPVL HG + +R ++ ++ D+++ +A D G G SD P G YT+ +
Sbjct: 119 GSSSNPPVLFIHGFPSQAYSYRNVLPVVSDNYHAIAFDWLGFGFSDKPQPDYGFDYTLDE 178
Query: 473 LVPAVIKVREHFKWDKFIYIGHSLGVPIGKFFNIAHPGYVTRMVEVDP--VPAHHTWPTT 646
++ + DK + PI + H + ++ V+P H P+T
Sbjct: 179 YTSSLESLINAVAPDKLSIVVQGYFAPIVIKYANEHQDKLNHLILVNPPITDKHAKLPST 238
>02_04_0371 + 22434710-22435102,22435428-22435624,22435707-22435824,
22436458-22436574,22436702-22436803,22437431-22437487,
22437976-22438044,22438423-22438533,22438597-22438791,
22439023-22439121,22439656-22440222,22440344-22440568,
22441036-22441338,22441640-22441707,22441947-22442105,
22442230-22442475,22442549-22442680,22443243-22443351,
22444131-22444283,22444359-22444601,22444695-22444862,
22445013-22445156,22445238-22445699,22446495-22446791,
22446867-22447024,22447139-22447246,22447474-22447732
Length = 1752
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Frame = +2
Query: 320 VLLCHGKLDASSGFRPLVSLLPDSFYYVAIDLPGNGRSDHLPPGVR------YTVIDLVP 481
+L HG L S + P++ L S +A+DLPG+G S+ L V ++V +
Sbjct: 1483 ILFLHGFLGTSEDWVPMMKALSPSARVIAVDLPGHGESEILQHDVENSNQISFSVQSVAD 1542
Query: 482 AVIKVREHFKWDKFIYIGHSLGVPI 556
++K+ + + +G+S+G I
Sbjct: 1543 LLLKLIRNITDGAVVVVGYSMGARI 1567
>09_05_0003 +
20016534-20016703,20017679-20017915,20018585-20018631,
20018932-20019050,20019128-20019288,20019379-20019488,
20019571-20019670,20019701-20019743,20020375-20020503
Length = 371
Score = 36.3 bits (80), Expect = 0.021
Identities = 31/116 (26%), Positives = 47/116 (40%), Gaps = 4/116 (3%)
Frame = +2
Query: 281 IRGLTWGNPSNPPVLLCHGKLDASSGFR-PLVSLLPDSFYYVAIDLPGNG---RSDHLPP 448
I +T+ + N P L+ AS GF L F +AID G G R D
Sbjct: 89 INTVTFDSEENAPTLVMVHGYGASQGFFFRNFDALASRFRVIAIDQLGWGGSSRPDFTCK 148
Query: 449 GVRYTVIDLVPAVIKVREHFKWDKFIYIGHSLGVPIGKFFNIAHPGYVTRMVEVDP 616
T + + + R+ FI +GHS G + + + HP +V ++ V P
Sbjct: 149 STEETEAWFIDSFEEWRKAKNLSNFILLGHSFGGYVAAKYALQHPEHVQHLILVGP 204
>05_03_0253 - 11014334-11014592,11015061-11015296,11015370-11015870
Length = 331
Score = 36.3 bits (80), Expect = 0.021
Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +2
Query: 299 GNPSNPPVLLCHGKLDASSGFRPLVSLLPDSFY-YVAIDLPGNGRSDHLPPGVRYTVIDL 475
G P PPVLL HG +R + L D+ Y VA DL G G SD ++YT + +
Sbjct: 30 GPPGAPPVLLLHGFPQVWYAWRHQMRALADAGYRAVAPDLRGYGDSDAPAAELQYTAMHV 89
Query: 476 V 478
V
Sbjct: 90 V 90
>03_04_0189 - 18256878-18257322,18260724-18260849,18261321-18261691
Length = 313
Score = 35.5 bits (78), Expect = 0.036
Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 2/105 (1%)
Frame = +2
Query: 320 VLLCHGKLDASSGFRPLVSLLPDSFYYVAIDLPGNGRS--DHLPPGVRYTVIDLVPAVIK 493
++L HG S ++ LV L + V D G G + D+ T+ ++
Sbjct: 21 IVLAHGFGTDQSVWKHLVPHLVADYRVVLFDTMGAGPTNPDYFDFSRYATLEGYALDLLA 80
Query: 494 VREHFKWDKFIYIGHSLGVPIGKFFNIAHPGYVTRMVEVDPVPAH 628
+ + + IY+GHS+ IG +I+ P +++V + P H
Sbjct: 81 ILQELRVASCIYVGHSVSAVIGAIASISRPDLFSKLVLLSASPRH 125
>03_06_0541 -
34607071-34607353,34608167-34608399,34609093-34609275,
34609357-34609659
Length = 333
Score = 33.9 bits (74), Expect = 0.11
Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 1/105 (0%)
Frame = +2
Query: 299 GNPSNPPVLLCHGKLDASSGFRPLVSLLPDSFYY-VAIDLPGNGRSDHLPPGVRYTVIDL 475
G+ + P VL HG + +R + L Y VA DL G G + P YT+ L
Sbjct: 27 GSGTAPAVLFVHGFPELWYSWRHQMGHLAARGYRCVAPDLRGYGGTTAPPEHTSYTIFHL 86
Query: 476 VPAVIKVREHFKWDKFIYIGHSLGVPIGKFFNIAHPGYVTRMVEV 610
V ++ + + + + +GH G + + P V +V +
Sbjct: 87 VGDLVALLDALELPQVFVVGHDWGAIVSWNLCLLRPDRVRALVNL 131
>05_06_0254 -
26706830-26706943,26707063-26707193,26707330-26707417,
26707970-26708087,26708184-26708332,26708787-26708840,
26708963-26709031,26709146-26709246,26709391-26709473,
26709846-26710041,26710171-26710279
Length = 403
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = +2
Query: 386 DSFYYVAIDLPGNGRSDHLPPGVRYTVIDLVPAVIKVREHFKWDKFIYIGHSLGVPI 556
D D G GRS LP Y+ + + + + +H W K GHS+G I
Sbjct: 77 DGIEVCCFDNRGVGRSSVLPHKSYYSTVIMARDALALMDHLGWKKAHVFGHSMGAMI 133
>01_05_0568 + 23339476-23339598,23339686-23339927,23340765-23341308
Length = 302
Score = 31.9 bits (69), Expect = 0.45
Identities = 18/70 (25%), Positives = 28/70 (40%)
Frame = +2
Query: 419 GNGRSDHLPPGVRYTVIDLVPAVIKVREHFKWDKFIYIGHSLGVPIGKFFNIAHPGYVTR 598
G+G YT ++ + E +Y+GHS+ IG +I PG T
Sbjct: 54 GDGEKAAAEEEEEYTFEGFADELVALMEEMGVSGAVYVGHSMAGMIGCIASINRPGLFTH 113
Query: 599 MVEVDPVPAH 628
+V V P +
Sbjct: 114 LVLVGASPRY 123
>08_02_1165 +
24830547-24831154,24832048-24832159,24832250-24832421,
24832486-24832700,24833922-24833996,24834367-24834390
Length = 401
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 260 VKAPWGNIRGLTWGNPSNPPVLLCHGKLDASSGFRPLVSL 379
VK W +I+ +P+NP ++LC KL G L ++
Sbjct: 356 VKRVWDHIKSNNLEDPANPTMILCDSKLKQLFGCESLTAM 395
>01_01_1078 +
8489872-8490168,8490280-8490462,8490667-8490908,
8490988-8491240
Length = 324
Score = 29.9 bits (64), Expect = 1.8
Identities = 31/113 (27%), Positives = 43/113 (38%), Gaps = 3/113 (2%)
Frame = +2
Query: 299 GNPSNPPVLLCHGKLDASSGFR-PLVSLLPDSFYYVAIDLPGNGRSDHLPPGVRYTVIDL 475
G P LL HG + +R + +L F VA DL G G SD YTV+ L
Sbjct: 25 GPEGGPVALLVHGFPELWYSWRHQMRALAARGFRAVAPDLRGYGDSDAPQGRDSYTVLHL 84
Query: 476 VPAVIKVREHFKWDKFIYIGHSLGVPIGKFFNIAHPGYVTRMV--EVDPVPAH 628
V ++ + + GH G + + VT V V+ P H
Sbjct: 85 VGDLVALIADLGRPQVFVAGHDWGAVVAWQLCLLRADLVTAHVSLSVEYQPRH 137
>04_03_0937 +
20923705-20923833,20924001-20924012,20924413-20924473,
20924523-20924749,20924859-20925104,20925645-20925657,
20927681-20928302,20928320-20928949,20928960-20929224
Length = 734
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 401 VAIDLPGNGRSDHLPPGVRYTVIDLVPAVIKVREH 505
VA D+ GRS PPG T +D++ A V H
Sbjct: 614 VACDVVPGGRSRRSPPGAAATKVDVLRAAADVPRH 648
>06_03_0774 + 24504964-24507459
Length = 831
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +2
Query: 284 RGLTWGNPSNPPVLLCHGKLDASSGFRPLVSLLPDSFYYV 403
R LT GN PP + D + GFR L S PDS ++
Sbjct: 32 RNLTAGNSLRPPEYITSPSGDFAFGFRALDSGGPDSLLFL 71
>04_04_1378 +
33105564-33105634,33105786-33106253,33106558-33106583,
33106741-33106771,33106890-33106977,33107094-33107338,
33107339-33107383,33107530-33107621,33107718-33107920,
33108215-33108496
Length = 516
Score = 28.3 bits (60), Expect = 5.5
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +2
Query: 272 WGNIRGLTWGNPSNPP 319
WGN G++W +P +PP
Sbjct: 456 WGNAGGMSWPHPPHPP 471
>03_02_0068 + 5390004-5390425,5390517-5390949
Length = 284
Score = 28.3 bits (60), Expect = 5.5
Identities = 25/104 (24%), Positives = 44/104 (42%), Gaps = 3/104 (2%)
Frame = +2
Query: 320 VLLCHGKLDASSGFRPLVSLLPDSFYYVAIDL--PGNGRSDHLPPGVRYTVIDL-VPAVI 490
V+L HG S + ++ L V DL G+ DH RY +D V ++
Sbjct: 38 VVLSHGFGTDQSAWSRVLPYLTRDHRVVLYDLVCAGSVNPDHFDFR-RYDNLDAYVDDLL 96
Query: 491 KVREHFKWDKFIYIGHSLGVPIGKFFNIAHPGYVTRMVEVDPVP 622
+ + + + ++GHS+ IG +I P ++V + P
Sbjct: 97 AILDALRIPRCAFVGHSVSAMIGILASIRRPDLFAKLVLIGASP 140
>01_07_0298 -
42586007-42589742,42590167-42590280,42590295-42590437,
42591174-42591347
Length = 1388
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 149 YLYGAFKVLKDSLTAHPAP 205
+ +GAFKV DS+ AHP P
Sbjct: 496 FQFGAFKVGPDSVGAHPGP 514
>05_06_0183 -
26182481-26182897,26183005-26183163,26183261-26183714,
26184370-26184485
Length = 381
Score = 27.5 bits (58), Expect = 9.7
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = -2
Query: 183 ESFNTLNAPYKYIRVKSYLMNFV 115
E NT+ AP+K++ +KS ++N +
Sbjct: 190 EEVNTVVAPFKFLHLKSLMINLI 212
>04_04_1587 + 34630678-34632282
Length = 534
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Frame = +2
Query: 368 LVSLLPDSFYYVA----IDLPGNGRSDHLPPGVRYTVIDLV 478
LV +P+S + + ++L NG S LPPG+R+ + LV
Sbjct: 311 LVGSIPESLFGLQKLWNLNLSRNGLSGSLPPGIRHGLPSLV 351
>04_04_0005 +
22095107-22095210,22095347-22095431,22095553-22095623,
22096613-22096727,22096884-22096963,22097302-22097386,
22098081-22098175,22098298-22098348,22098866-22098946,
22099659-22099731,22100057-22100134,22100224-22100256
Length = 316
Score = 27.5 bits (58), Expect = 9.7
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Frame = +2
Query: 308 SNPPVLLC-HGKLDASSGFRPLVSLLPDSFYYVAIDLPGNGR---SDHLPPGVRYTVIDL 475
S PV+ C HG + F S + + V++DL G+G+ SD + D+
Sbjct: 72 SEGPVVFCLHGGGYSGLSFALAASRMKEKARVVSMDLRGHGKSTTSDDSDLSIETLSSDV 131
Query: 476 VPAVIKVREHFKWDKFIYIGHSLG 547
+ AV++ I +GHS+G
Sbjct: 132 I-AVLRTLYGDSPPAIILVGHSMG 154
>01_06_0318 - 28434817-28435197,28435333-28435461
Length = 169
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/44 (31%), Positives = 17/44 (38%)
Frame = +1
Query: 334 WEAGR*FRVQTPSLPPAGFVLLRGHRLTREWQIRSPAPGRQIYR 465
W G R P++ A LR HR EW+ R YR
Sbjct: 14 WLQGSSIRSLAPAIYAAVPARLRNHRTVAEWETSGEYSSRSAYR 57
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,239,587
Number of Sequences: 37544
Number of extensions: 425198
Number of successful extensions: 945
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 944
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1596695220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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