Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt7a21
         (646 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    25   2.7  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    24   4.7  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   8.3  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = -1

Query: 523 EFVPFK-MLPHFYYGRYEIYHGISDARGQ 440
           +F P   +LPHF  G+  IY G S+   Q
Sbjct: 333 QFAPVNFVLPHFGLGQMYIYRGDSENAAQ 361


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = +2

Query: 275 GNIRGLTWGNPSNPPVLLCHGKLDASSGFRPLVSLLPDSFYYVAID 412
           GN+  L  G  +   VL+C  ++   S  R +V +  D + ++A D
Sbjct: 240 GNVDNLEAGLDALMQVLVCEKQIGWGSNTRKIVIVATDGWLHMAGD 285


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +2

Query: 341  LDASSGFRPLVSLLP-DSFYYVAIDLPGNGR 430
            LDA SG+R L SLL   SF+ V    P   R
Sbjct: 1061 LDAGSGWRELGSLLDFHSFFTVWEQAPSPAR 1091


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 698,965
Number of Sequences: 2352
Number of extensions: 16740
Number of successful extensions: 26
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)