Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt7a21
         (646 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88315-14|AAB42366.2|  355|Caenorhabditis elegans Hypothetical p...    36   0.019
U00052-2|AAK95881.1|  404|Caenorhabditis elegans Hypothetical pr...    36   0.019
U88315-13|AAN84844.1|  359|Caenorhabditis elegans Hypothetical p...    35   0.043
U88315-12|AAB42367.1|  444|Caenorhabditis elegans Hypothetical p...    35   0.043
Z81105-4|CAB03219.1|  299|Caenorhabditis elegans Hypothetical pr...    31   0.53 

>U88315-14|AAB42366.2|  355|Caenorhabditis elegans Hypothetical
           protein C37H5.2 protein.
          Length = 355

 Score = 36.3 bits (80), Expect = 0.019
 Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 2/105 (1%)
 Frame = +2

Query: 308 SNPPVLLCHGKLDASSGFRPLVSLLPDSFYYVAIDLPGNGRSDH--LPPGVRYTVIDLVP 481
           S  P++L HG     + +   +  L       AIDLPG GRS              +++ 
Sbjct: 70  SKYPIVLIHGFGAGVALWGSAIKRLAQFQNVYAIDLPGFGRSSRTKFSTDPETAEKEMIE 129

Query: 482 AVIKVREHFKWDKFIYIGHSLGVPIGKFFNIAHPGYVTRMVEVDP 616
           A+ + R     +K   +GHS G  +   + + +P  +  ++  DP
Sbjct: 130 AIEQWRVKMNLEKMNLVGHSFGGYLSTSYALKYPKRIENLILADP 174


>U00052-2|AAK95881.1|  404|Caenorhabditis elegans Hypothetical
           protein K02F3.6 protein.
          Length = 404

 Score = 36.3 bits (80), Expect = 0.019
 Identities = 26/102 (25%), Positives = 43/102 (42%)
 Frame = +2

Query: 299 GNPSNPPVLLCHGKLDASSGFRPLVSLLPDSFYYVAIDLPGNGRSDHLPPGVRYTVIDLV 478
           G+   P +L  HG  +    +R  +    D +  VAID  G   SD       Y++ +L 
Sbjct: 135 GSDDKPLMLFIHGYPEFWYSWRFQLKEFADKYRCVAIDQRGYNLSDKPKHVDNYSIDELT 194

Query: 479 PAVIKVREHFKWDKFIYIGHSLGVPIGKFFNIAHPGYVTRMV 604
             +  V E   +DK I + H  G  +   F   +P  V +++
Sbjct: 195 GDIRDVIEGLGYDKAIVVAHDWGGLVAWQFAEQYPEMVDKLI 236


>U88315-13|AAN84844.1|  359|Caenorhabditis elegans Hypothetical
           protein C37H5.3b protein.
          Length = 359

 Score = 35.1 bits (77), Expect = 0.043
 Identities = 23/102 (22%), Positives = 43/102 (42%), Gaps = 2/102 (1%)
 Frame = +2

Query: 317 PVLLCHGKLDASSGFRPLVSLLPDSFYYVAIDLPGNGRSDH--LPPGVRYTVIDLVPAVI 490
           P++L HG     + +   +  L       A DLPG GRS              +++ ++ 
Sbjct: 77  PIVLIHGFGAGVALWGSAIKRLAQFQTVHAFDLPGFGRSSRPKFSSDPETAETEMIDSIE 136

Query: 491 KVREHFKWDKFIYIGHSLGVPIGKFFNIAHPGYVTRMVEVDP 616
           + R+    +K   +GHS G  +   + + +P  V  ++  DP
Sbjct: 137 QWRDKMNLEKMNLVGHSFGGYLATSYALKYPKRVENLILADP 178


>U88315-12|AAB42367.1|  444|Caenorhabditis elegans Hypothetical
           protein C37H5.3a protein.
          Length = 444

 Score = 35.1 bits (77), Expect = 0.043
 Identities = 23/102 (22%), Positives = 43/102 (42%), Gaps = 2/102 (1%)
 Frame = +2

Query: 317 PVLLCHGKLDASSGFRPLVSLLPDSFYYVAIDLPGNGRSDH--LPPGVRYTVIDLVPAVI 490
           P++L HG     + +   +  L       A DLPG GRS              +++ ++ 
Sbjct: 162 PIVLIHGFGAGVALWGSAIKRLAQFQTVHAFDLPGFGRSSRPKFSSDPETAETEMIDSIE 221

Query: 491 KVREHFKWDKFIYIGHSLGVPIGKFFNIAHPGYVTRMVEVDP 616
           + R+    +K   +GHS G  +   + + +P  V  ++  DP
Sbjct: 222 QWRDKMNLEKMNLVGHSFGGYLATSYALKYPKRVENLILADP 263


>Z81105-4|CAB03219.1|  299|Caenorhabditis elegans Hypothetical
           protein R05D7.4 protein.
          Length = 299

 Score = 31.5 bits (68), Expect = 0.53
 Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
 Frame = +2

Query: 311 NPPVLLCHGKLDASSGFRPLVSLLPDSFY--YVAIDLPGNGRSDHLPPGVRYTVI--DLV 478
           N P+++ HG       +  +   L         A+D+  +G S H    + YT +  DLV
Sbjct: 45  NSPLVIVHGLFGQKQNWNSVGKALHKKLEAPVYAVDVRNHGSSPHTET-MSYTEMAEDLV 103

Query: 479 PAVIKVREHFKWDKFIYIGHSLG 547
             + KV+E  K  +   +GHS+G
Sbjct: 104 LFIDKVKEETKKTRVNLLGHSMG 126


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,077,389
Number of Sequences: 27780
Number of extensions: 339277
Number of successful extensions: 654
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 653
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)