Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt7a21
         (646 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    25   0.47 
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              25   0.83 
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   2.5  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   2.5  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   2.5  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   2.5  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   2.5  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   2.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   2.5  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +2

Query: 383 PDSFYYVAIDLPGNG 427
           P +FYY+   LPGNG
Sbjct: 410 PQNFYYIEEYLPGNG 424


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +2

Query: 422  NGRSDHLPPGVRYTVIDLVPA 484
            N  S+++ PG  + V+DLVPA
Sbjct: 1507 NQVSNNVKPGGNFVVLDLVPA 1527


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = +2

Query: 425 GRSDHLPPGVRYTVIDLVPAVIKVREHFKWDKFIYIGHSLGVPIGK 562
           G+ + +P  V   V     + +   +   W + IY G ++G P+ K
Sbjct: 607 GKKEGMPYNVLVVVSPFDDSNVVQIDSPVWGRHIYDGRAMGFPLDK 652


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = +2

Query: 425 GRSDHLPPGVRYTVIDLVPAVIKVREHFKWDKFIYIGHSLGVPIGK 562
           G+ + +P  V   V     + +   +   W + IY G ++G P+ K
Sbjct: 607 GKKEGMPYNVLVVVSPFDDSNVVQIDSPVWGRHIYDGRAMGFPLDK 652


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 512 WDKFIYIGHSLGVPIG 559
           W K IY+    G+P+G
Sbjct: 253 WTKVIYVKRFFGLPVG 268


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 512 WDKFIYIGHSLGVPIG 559
           W K IY+    G+P+G
Sbjct: 253 WTKVIYVKRFFGLPVG 268


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 512 WDKFIYIGHSLGVPIG 559
           W K IY+    G+P+G
Sbjct: 253 WTKVIYVKRFFGLPVG 268


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -2

Query: 519  LSHLKCSLTFITAGTRSITVYLTPGGR*SDLPFPGKS 409
            L H++    FI  GT S +  ++P      LP  G+S
Sbjct: 1808 LKHIRAVSDFIYHGTSSTSSDISPMSEQKSLPRRGRS 1844



 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 368 LVSLLPDSFYYVAIDLPGNGRSDHLPPG 451
           +VS L +  +Y+   L G+G+   LP G
Sbjct: 164 VVSWLQEPSFYIYPSLQGDGKFHLLPTG 191


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -2

Query: 519  LSHLKCSLTFITAGTRSITVYLTPGGR*SDLPFPGKS 409
            L H++    FI  GT S +  ++P      LP  G+S
Sbjct: 1804 LKHIRAVSDFIYHGTSSTSSDISPMSEQKSLPRRGRS 1840



 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 368 LVSLLPDSFYYVAIDLPGNGRSDHLPPG 451
           +VS L +  +Y+   L G+G+   LP G
Sbjct: 164 VVSWLQEPSFYIYPSLQGDGKFHLLPTG 191


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,880
Number of Sequences: 438
Number of extensions: 4519
Number of successful extensions: 19
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19438227
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)