Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt7a16
         (630 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.2  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    24   1.2  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   2.8  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   2.8  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   3.7  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   3.7  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   4.9  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   8.5  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   8.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.5  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   8.5  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +3

Query: 12  SDFRCIDLQWLCVLLLSEKI 71
           +DF  ++  W+C LL  +K+
Sbjct: 84  ADFAYLETTWICTLLKKDKL 103


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +3

Query: 12  SDFRCIDLQWLCVLLLSEKI 71
           +DF  ++  W+C LL  +K+
Sbjct: 102 ADFAYLETTWICTLLKKDKL 121


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 414 PYAIHSIYPVIKLLHRNS 467
           PY  HSIYP   L+  N+
Sbjct: 346 PYPSHSIYPSSNLMPLNN 363


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory
          receptor candidate 33 protein.
          Length = 321

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +1

Query: 1  GVLFPISDVLIYNGCVCCCYRKR 69
          G L+PIS VLIY   V   +++R
Sbjct: 18 GKLWPISIVLIYTVGVVYSFKRR 40


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 18/62 (29%), Positives = 23/62 (37%)
 Frame = +2

Query: 374 RTALRRLHALYADAICNPFHLPGDQITSPKFDKQVKNIMLNNV*TLKKIKLFKVAKHCLY 553
           R   R   A+Y        H PG      K     K I LNN   L  +K+F+    C  
Sbjct: 184 RAGPRTESAVYEPVRIMGVHRPGFDNDCNKNTSTSKEIALNNDVLLFFVKVFRPEPLCER 243

Query: 554 LY 559
           L+
Sbjct: 244 LF 245


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +3

Query: 141 SCTRRWTPW 167
           SCTR WT W
Sbjct: 111 SCTRYWTCW 119


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -1

Query: 522 LIFFKVQTLLSIIFLTCLSNFGEVI*SPGKWNGLHMASA 406
           LIF  VQ + SI   TCL    +++     W  L +  A
Sbjct: 206 LIFMNVQWVRSIPAFTCLPLSDQLLLLEESWLDLFVLGA 244


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 122 ELSRQWLVHTALDALEERLTTANPNN 199
           +L RQ L+H   +    + T A PNN
Sbjct: 627 DLDRQGLLHRQFNLPPAKDTIAVPNN 652


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 59  IGKDNSPLYIGG 94
           I  +NSPLY GG
Sbjct: 213 IAAENSPLYWGG 224


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 89  GGIGNDTSSDNELS 130
           GG+ NDT SD+  S
Sbjct: 4   GGLRNDTYSDDNFS 17


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 89  GGIGNDTSSDNELS 130
           GG+ NDT SD+  S
Sbjct: 4   GGLRNDTYSDDNFS 17


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 89  GGIGNDTSSDNELS 130
           GG+ NDT SD+  S
Sbjct: 4   GGLRNDTYSDDNFS 17


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 89  GGIGNDTSSDNELS 130
           GG+ NDT SD+  S
Sbjct: 4   GGLRNDTYSDDNFS 17


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -1

Query: 522 LIFFKVQTLLSIIFLTCLSNFGEVI*SPGKWNGLHMASA 406
           L+F  VQ + SI   TCL    +++     W  L +  A
Sbjct: 206 LLFMNVQWVRSIPAFTCLPLSDQLLLLEESWLDLFVLGA 244


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,406
Number of Sequences: 336
Number of extensions: 3121
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)