Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt6p21
         (703 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061558-1|AAL29106.1|  283|Drosophila melanogaster LP09908p pro...   147   1e-35
AE014298-1968|AAF48325.1|  283|Drosophila melanogaster CG11095-P...   147   1e-35
BT022341-1|AAY54757.1|  158|Drosophila melanogaster IP04485p pro...    37   0.030
BT022318-1|AAY54734.1|  144|Drosophila melanogaster IP04585p pro...    37   0.030
BT022285-1|AAY54701.1|  142|Drosophila melanogaster IP04685p pro...    37   0.030
AY907540-1|AAX68972.1|  142|Drosophila melanogaster diadenosine ...    37   0.030
AF298215-1|AAG30223.1| 2130|Drosophila melanogaster DNA polymera...    31   1.5  
AY047526-1|AAK77258.1|  330|Drosophila melanogaster GH03273p pro...    30   3.5  
AE014298-2189|AAF48489.1|  330|Drosophila melanogaster CG8128-PA...    30   3.5  
AE014297-400|AAF51921.2|  397|Drosophila melanogaster CG15581-PA...    30   3.5  
BT016065-1|AAV36950.1|  792|Drosophila melanogaster LP11827p pro...    29   4.6  
BT004829-1|AAO45185.1|  564|Drosophila melanogaster SD14939p pro...    29   4.6  
AY094746-1|AAM11099.1|  512|Drosophila melanogaster GM04208p pro...    29   4.6  
AF298216-1|AAG30224.1| 2130|Drosophila melanogaster DNA polymera...    29   4.6  
AE014296-2580|AAX52744.1|  564|Drosophila melanogaster CG6169-PD...    29   4.6  
AE014296-2579|AAN11769.2|  564|Drosophila melanogaster CG6169-PB...    29   4.6  
AE014296-2577|AAF49579.4|  791|Drosophila melanogaster CG6169-PA...    29   4.6  
AE013599-501|AAF59191.2| 2130|Drosophila melanogaster CG1925-PA ...    29   4.6  
AE014134-1672|AAF52796.1| 4345|Drosophila melanogaster CG15828-P...    29   8.1  
AE014134-1671|AAS64667.1| 4374|Drosophila melanogaster CG15828-P...    29   8.1  

>AY061558-1|AAL29106.1|  283|Drosophila melanogaster LP09908p
           protein.
          Length = 283

 Score =  147 bits (357), Expect = 1e-35
 Identities = 81/200 (40%), Positives = 120/200 (60%), Gaps = 9/200 (4%)
 Frame = +1

Query: 112 LLNAVTRSICISKLKELPIF-----LSKEVTYKTKASVLVPLCIEN--DQVCLLYTLRSS 270
           LL   ++  C+ K++ LP F     L+     K  ++VL+ LC E   +++ LLYT RS 
Sbjct: 49  LLGPESQRRCMEKMRSLPAFPRPKALTPSRREKQTSAVLIALCQERGTNEISLLYTRRSR 108

Query: 271 NLSNHSGQVSFPGGKMDKNEDVY-ETALRETEEEIGISREHIDIWSKMPQVQGRDRNIAI 447
           +L +HS Q+SFPGG+ D ++  Y + ALRETEEEIG+ R  I +W +  Q+Q   R  +I
Sbjct: 109 HLRSHSFQISFPGGRRDDHDSSYVDCALRETEEEIGLPRHRIQVWGEAKQLQ-LPRTSSI 167

Query: 448 TPVIGLLRNYHRDNLRPNLGEVEEIFTVPMKTFCDVNNHAHLEY-DGIIIPVFLNEKHKI 624
            PV+G++ ++    LR N  EVEE F+VP+ +        H ++  G   PVF+ + ++I
Sbjct: 168 VPVVGVVPDFSLSELRLNWEEVEEAFSVPLTSLMLPKATRHTQFRSGYSGPVFVVDHYRI 227

Query: 625 WGITGMITHLFLSCFLPEKL 684
           WGITG +THLFL C LP  L
Sbjct: 228 WGITGYLTHLFLHCLLPPNL 247


>AE014298-1968|AAF48325.1|  283|Drosophila melanogaster CG11095-PA
           protein.
          Length = 283

 Score =  147 bits (357), Expect = 1e-35
 Identities = 81/200 (40%), Positives = 120/200 (60%), Gaps = 9/200 (4%)
 Frame = +1

Query: 112 LLNAVTRSICISKLKELPIF-----LSKEVTYKTKASVLVPLCIEN--DQVCLLYTLRSS 270
           LL   ++  C+ K++ LP F     L+     K  ++VL+ LC E   +++ LLYT RS 
Sbjct: 49  LLGPESQRRCMEKMRSLPAFPRPKALTPSRREKQTSAVLIALCQERGTNEISLLYTRRSR 108

Query: 271 NLSNHSGQVSFPGGKMDKNEDVY-ETALRETEEEIGISREHIDIWSKMPQVQGRDRNIAI 447
           +L +HS Q+SFPGG+ D ++  Y + ALRETEEEIG+ R  I +W +  Q+Q   R  +I
Sbjct: 109 HLRSHSFQISFPGGRRDDHDSSYVDCALRETEEEIGLPRHRIQVWGEAKQLQ-LPRTSSI 167

Query: 448 TPVIGLLRNYHRDNLRPNLGEVEEIFTVPMKTFCDVNNHAHLEY-DGIIIPVFLNEKHKI 624
            PV+G++ ++    LR N  EVEE F+VP+ +        H ++  G   PVF+ + ++I
Sbjct: 168 VPVVGVVPDFSLSELRLNWEEVEEAFSVPLTSLMLPKATRHTQFRSGYSGPVFVVDHYRI 227

Query: 625 WGITGMITHLFLSCFLPEKL 684
           WGITG +THLFL C LP  L
Sbjct: 228 WGITGYLTHLFLHCLLPPNL 247


>BT022341-1|AAY54757.1|  158|Drosophila melanogaster IP04485p
           protein.
          Length = 158

 Score = 36.7 bits (81), Expect = 0.030
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = +1

Query: 298 SFPGGKMDKNEDVYETALRETEEEIGISREHIDIWSKMP 414
           S P G +D  ED + TALRET+EE G   + + I+   P
Sbjct: 48  SSPKGHVDPGEDDFTTALRETKEEAGYDEKDLIIYKDTP 86


>BT022318-1|AAY54734.1|  144|Drosophila melanogaster IP04585p
           protein.
          Length = 144

 Score = 36.7 bits (81), Expect = 0.030
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = +1

Query: 298 SFPGGKMDKNEDVYETALRETEEEIGISREHIDIWSKMP 414
           S P G +D  ED + TALRET+EE G   + + I+   P
Sbjct: 34  SSPKGHVDPGEDDFTTALRETKEEAGYDEKDLIIYKDTP 72


>BT022285-1|AAY54701.1|  142|Drosophila melanogaster IP04685p
           protein.
          Length = 142

 Score = 36.7 bits (81), Expect = 0.030
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = +1

Query: 298 SFPGGKMDKNEDVYETALRETEEEIGISREHIDIWSKMP 414
           S P G +D  ED + TALRET+EE G   + + I+   P
Sbjct: 32  SSPKGHVDPGEDDFTTALRETKEEAGYDEKDLIIYKDTP 70


>AY907540-1|AAX68972.1|  142|Drosophila melanogaster diadenosine
           tetraphosphate hydrolaseprotein.
          Length = 142

 Score = 36.7 bits (81), Expect = 0.030
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = +1

Query: 298 SFPGGKMDKNEDVYETALRETEEEIGISREHIDIWSKMP 414
           S P G +D  ED + TALRET+EE G   + + I+   P
Sbjct: 32  SSPKGHVDPGEDDFTTALRETKEEAGYDEKDLIIYKDTP 70


>AF298215-1|AAG30223.1| 2130|Drosophila melanogaster DNA polymerase
           zeta catalyticsubunit protein.
          Length = 2130

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 15/43 (34%), Positives = 26/43 (60%)
 Frame = +1

Query: 328 EDVYETALRETEEEIGISREHIDIWSKMPQVQGRDRNIAITPV 456
           +DV E  L+ T+ +   S+E + + SK+PQ+ G D  +  TP+
Sbjct: 514 DDVDELLLKLTQSQPAESKE-LKVSSKLPQIDGADDRLQRTPI 555


>AY047526-1|AAK77258.1|  330|Drosophila melanogaster GH03273p
           protein.
          Length = 330

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +1

Query: 304 PGGKMDKNEDVYETALRETEEEIGISRE 387
           PGG ++  E++ + A+RE  EE GI  E
Sbjct: 192 PGGYVEPRENLIDAAIREVAEETGIRTE 219


>AE014298-2189|AAF48489.1|  330|Drosophila melanogaster CG8128-PA
           protein.
          Length = 330

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +1

Query: 304 PGGKMDKNEDVYETALRETEEEIGISRE 387
           PGG ++  E++ + A+RE  EE GI  E
Sbjct: 192 PGGYVEPRENLIDAAIREVAEETGIRTE 219


>AE014297-400|AAF51921.2|  397|Drosophila melanogaster CG15581-PA
           protein.
          Length = 397

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +2

Query: 311 VKWIKMKMFMRLLYGKLKRKLEYLVNTSIFGVKCLKSRVVIEI 439
           V W ++    R L+G L R+ +Y  N  I GV  L  R  ++I
Sbjct: 340 VTWYELSGEQRKLFGFLLRESQYPHNIQILGVMSLSVRTALQI 382


>BT016065-1|AAV36950.1|  792|Drosophila melanogaster LP11827p
           protein.
          Length = 792

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +1

Query: 301 FPGGKMDKNEDVYETALRETEEEIG 375
           FP GK+++NED    A RE  EE G
Sbjct: 339 FPKGKINENEDPAHCATREVYEETG 363


>BT004829-1|AAO45185.1|  564|Drosophila melanogaster SD14939p
           protein.
          Length = 564

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +1

Query: 301 FPGGKMDKNEDVYETALRETEEEIG 375
           FP GK+++NED    A RE  EE G
Sbjct: 112 FPKGKINENEDPAHCATREVYEETG 136


>AY094746-1|AAM11099.1|  512|Drosophila melanogaster GM04208p
           protein.
          Length = 512

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +1

Query: 301 FPGGKMDKNEDVYETALRETEEEIG 375
           FP GK+++NED    A RE  EE G
Sbjct: 60  FPKGKINENEDPAHCATREVYEETG 84


>AF298216-1|AAG30224.1| 2130|Drosophila melanogaster DNA polymerase
           zeta catalyticsubunit protein.
          Length = 2130

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = +1

Query: 328 EDVYETALRETEEEIGISREHIDIWSKMPQVQGRDRNIAITPV 456
           +DV E  L+ T+ +   S+E +   SK+PQ+ G D  +  TP+
Sbjct: 514 DDVDELLLKLTQSQPAESKE-LKASSKLPQIDGADDRLQRTPI 555


>AE014296-2580|AAX52744.1|  564|Drosophila melanogaster CG6169-PD,
           isoform D protein.
          Length = 564

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +1

Query: 301 FPGGKMDKNEDVYETALRETEEEIG 375
           FP GK+++NED    A RE  EE G
Sbjct: 112 FPKGKINENEDPAHCATREVYEETG 136


>AE014296-2579|AAN11769.2|  564|Drosophila melanogaster CG6169-PB,
           isoform B protein.
          Length = 564

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +1

Query: 301 FPGGKMDKNEDVYETALRETEEEIG 375
           FP GK+++NED    A RE  EE G
Sbjct: 112 FPKGKINENEDPAHCATREVYEETG 136


>AE014296-2577|AAF49579.4|  791|Drosophila melanogaster CG6169-PA,
           isoform A protein.
          Length = 791

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +1

Query: 301 FPGGKMDKNEDVYETALRETEEEIG 375
           FP GK+++NED    A RE  EE G
Sbjct: 339 FPKGKINENEDPAHCATREVYEETG 363


>AE013599-501|AAF59191.2| 2130|Drosophila melanogaster CG1925-PA
           protein.
          Length = 2130

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = +1

Query: 328 EDVYETALRETEEEIGISREHIDIWSKMPQVQGRDRNIAITPV 456
           +DV E  L+ T+ +   S+E +   SK+PQ+ G D  +  TP+
Sbjct: 514 DDVDELLLKLTQSQPAESKE-LKASSKLPQIDGADDRLQRTPI 555


>AE014134-1672|AAF52796.1| 4345|Drosophila melanogaster CG15828-PA,
            isoform A protein.
          Length = 4345

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = +1

Query: 448  TPVIGLLRNYH--RDNLRPNLGEVEEIFTVPMKTFCDVNNHAHLEYD 582
            T  +G + NY   +DN++P   +V+     P +   ++  H H+E D
Sbjct: 2152 TQELGFVFNYTALQDNVKPKAHDVQVTLLTPYEMLHEIYVHGHIELD 2198


>AE014134-1671|AAS64667.1| 4374|Drosophila melanogaster CG15828-PB,
            isoform B protein.
          Length = 4374

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = +1

Query: 448  TPVIGLLRNYH--RDNLRPNLGEVEEIFTVPMKTFCDVNNHAHLEYD 582
            T  +G + NY   +DN++P   +V+     P +   ++  H H+E D
Sbjct: 2181 TQELGFVFNYTALQDNVKPKAHDVQVTLLTPYEMLHEIYVHGHIELD 2227


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,532,976
Number of Sequences: 53049
Number of extensions: 595879
Number of successful extensions: 1536
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1530
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)