Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt6p12
         (608 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY084151-1|AAL89889.1|  272|Drosophila melanogaster RE31520p pro...   217   7e-57
AE014297-698|AAF54193.2|  272|Drosophila melanogaster CG9667-PA ...   217   7e-57
AE014297-4284|ABI31213.1|  649|Drosophila melanogaster CG33553-P...    31   1.2  
AE014296-910|AAF47948.2| 4390|Drosophila melanogaster CG17150-PA...    29   5.0  
AF132164-1|AAD34752.1|  969|Drosophila melanogaster unknown prot...    28   8.7  
AE014296-3649|AAF51804.1|  969|Drosophila melanogaster CG7139-PA...    28   8.7  

>AY084151-1|AAL89889.1|  272|Drosophila melanogaster RE31520p
           protein.
          Length = 272

 Score =  217 bits (531), Expect = 7e-57
 Identities = 100/126 (79%), Positives = 115/126 (91%)
 Frame = +2

Query: 230 MARNAEKAMTTLARWRAAQVQEAGGQRERRPYLASECNDLPQAEKWRLQIVREIAKKVAQ 409
           MARNAEKAMTTLARWRAA+  E+G ++ERRPYLASEC+DLP+ EK+RL+I+R+I+KKVAQ
Sbjct: 1   MARNAEKAMTTLARWRAAKEVESG-EKERRPYLASECHDLPRCEKFRLEIIRDISKKVAQ 59

Query: 410 IQNAGLGEFRIRDLNDEINKLMREKRHWEVQIKSLGGPDHARVGPKMLDQDGKEVPGNRG 589
           IQNAGLGEFRIRDLNDEINKL+REKRHWE QI SLGGP + R GPKM D +G+EVPGNRG
Sbjct: 60  IQNAGLGEFRIRDLNDEINKLLREKRHWENQISSLGGPHYRRYGPKMFDAEGREVPGNRG 119

Query: 590 YKYFGA 607
           YKYFGA
Sbjct: 120 YKYFGA 125


>AE014297-698|AAF54193.2|  272|Drosophila melanogaster CG9667-PA
           protein.
          Length = 272

 Score =  217 bits (531), Expect = 7e-57
 Identities = 100/126 (79%), Positives = 115/126 (91%)
 Frame = +2

Query: 230 MARNAEKAMTTLARWRAAQVQEAGGQRERRPYLASECNDLPQAEKWRLQIVREIAKKVAQ 409
           MARNAEKAMTTLARWRAA+  E+G ++ERRPYLASEC+DLP+ EK+RL+I+R+I+KKVAQ
Sbjct: 1   MARNAEKAMTTLARWRAAKEVESG-EKERRPYLASECHDLPRCEKFRLEIIRDISKKVAQ 59

Query: 410 IQNAGLGEFRIRDLNDEINKLMREKRHWEVQIKSLGGPDHARVGPKMLDQDGKEVPGNRG 589
           IQNAGLGEFRIRDLNDEINKL+REKRHWE QI SLGGP + R GPKM D +G+EVPGNRG
Sbjct: 60  IQNAGLGEFRIRDLNDEINKLLREKRHWENQISSLGGPHYRRYGPKMFDAEGREVPGNRG 119

Query: 590 YKYFGA 607
           YKYFGA
Sbjct: 120 YKYFGA 125


>AE014297-4284|ABI31213.1|  649|Drosophila melanogaster CG33553-PG,
           isoform G protein.
          Length = 649

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = -1

Query: 362 SRLVVNHYILMQ-DTDVVLAGLPLPELVPHANVLVLSLLSLRFWPW 228
           S+ V +H+   Q    + +  LP P +V H   L+LS  SLRF P+
Sbjct: 213 SQQVADHFESSQIPCYIKMRDLPAPPVVDHCRDLILSSCSLRFMPY 258


>AE014296-910|AAF47948.2| 4390|Drosophila melanogaster CG17150-PA,
            isoform A protein.
          Length = 4390

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = +2

Query: 389  IAKKVAQIQNAGLGEFRIR-DLNDEINKLMREKRHWEVQIKSLGGPDHARVGPKMLD 556
            +AK+ A+     + +FR+   + D I +   EKRHW+   K LG   + ++ P + D
Sbjct: 1151 VAKRAAEQMRMKIEKFRVYLPVLDSICRHGLEKRHWDQISKILGRKVNPKLFPTLKD 1207


>AF132164-1|AAD34752.1|  969|Drosophila melanogaster unknown
           protein.
          Length = 969

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
 Frame = +1

Query: 178 NLNGLDPKNRNCKYNLNHGQKRRESNDNTSTLACGTSSGSG---RPARTTSVSCIRM 339
           N+N  +  N+N   N N+      +NDN +   CG S   G   + A   + S IRM
Sbjct: 23  NINNNNNNNKNNNNNNNNNNNNNNNNDNNN---CGRSKSGGTHRKYATAEAPSSIRM 76


>AE014296-3649|AAF51804.1|  969|Drosophila melanogaster CG7139-PA,
           isoform A protein.
          Length = 969

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
 Frame = +1

Query: 178 NLNGLDPKNRNCKYNLNHGQKRRESNDNTSTLACGTSSGSG---RPARTTSVSCIRM 339
           N+N  +  N+N   N N+      +NDN +   CG S   G   + A   + S IRM
Sbjct: 23  NINNNNNNNKNNNNNNNNNNNNNNNNDNNN---CGRSKSGGTHRKYATAEAPSSIRM 76


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,139,813
Number of Sequences: 53049
Number of extensions: 561955
Number of successful extensions: 2039
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2037
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)